RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 SBF1O95248 1867 aa17.46■□□□□ 0.38
TNFSF13B-206ENST00000542136 ABCC4O15439 1325 aa17.46■□□□□ 0.38
TNFSF13B-206ENST00000542136 KIF16BQ96L93 1317 aa17.46■□□□□ 0.38
TNFSF13B-206ENST00000542136 RTL9Q8NET4 1388 aa17.45■□□□□ 0.38
TNFSF13B-206ENST00000542136 PPEF1O14829 653 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13B-206ENST00000542136 UBE3BQ7Z3V4 1068 aa17.45■□□□□ 0.38
TNFSF13B-206ENST00000542136 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
TNFSF13B-206ENST00000542136 TAOK3Q9H2K8 898 aa17.45■□□□□ 0.38
TNFSF13B-206ENST00000542136 UTYO14607 1347 aa17.45■□□□□ 0.38
TNFSF13B-206ENST00000542136 GRM8O00222 908 aa17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 CTSWP56202 376 aa17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 C9orf131Q5VYM1 1079 aa17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 TTLL11Q8NHH1 800 aa17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 API5Q9BZZ5 524 aaKnown RBP17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
TNFSF13B-206ENST00000542136 CSF1RP07333 972 aa17.43■□□□□ 0.38
TNFSF13B-206ENST00000542136 SLC4A10Q6U841 1118 aa17.43■□□□□ 0.38
TNFSF13B-206ENST00000542136 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
TNFSF13B-206ENST00000542136 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
TNFSF13B-206ENST00000542136 CACNA1SQ13698 1873 aa17.43■□□□□ 0.38
TNFSF13B-206ENST00000542136 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
TNFSF13B-206ENST00000542136 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
TNFSF13B-206ENST00000542136 C9orf78Q9NZ63 289 aaPredicted RBP17.42■□□□□ 0.38
TNFSF13B-206ENST00000542136 RNF181Q9P0P0 153 aa17.42■□□□□ 0.38
TNFSF13B-206ENST00000542136 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
TNFSF13B-206ENST00000542136 CCT4P50991 539 aaKnown RBP17.41■□□□□ 0.38
TNFSF13B-206ENST00000542136 RASSF7Q02833 373 aa17.41■□□□□ 0.38
TNFSF13B-206ENST00000542136 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
TNFSF13B-206ENST00000542136 UTRNP46939 3433 aa17.41■□□□□ 0.38
TNFSF13B-206ENST00000542136 PRELPP51888 382 aa17.4■□□□□ 0.38
TNFSF13B-206ENST00000542136 SUPT20HQ8NEM7 779 aa17.4■□□□□ 0.38
TNFSF13B-206ENST00000542136 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
TNFSF13B-206ENST00000542136 MYH3P11055 1940 aa17.4■□□□□ 0.38
TNFSF13B-206ENST00000542136 FOXO4P98177 505 aa17.39■□□□□ 0.37
TNFSF13B-206ENST00000542136 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
TNFSF13B-206ENST00000542136 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
TNFSF13B-206ENST00000542136 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
TNFSF13B-206ENST00000542136 OLFM4Q6UX06 510 aa17.38■□□□□ 0.37
TNFSF13B-206ENST00000542136 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
TNFSF13B-206ENST00000542136 MPNDQ8N594 471 aa17.38■□□□□ 0.37
TNFSF13B-206ENST00000542136 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
TNFSF13B-206ENST00000542136 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
TNFSF13B-206ENST00000542136 LRRC37AA6NMS7 1700 aa17.38■□□□□ 0.37
TNFSF13B-206ENST00000542136 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
TNFSF13B-206ENST00000542136 GREM2Q9H772 168 aa17.37■□□□□ 0.37
TNFSF13B-206ENST00000542136 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
TNFSF13B-206ENST00000542136 BSDC1Q9NW68 430 aaPredicted RBP17.37■□□□□ 0.37
TNFSF13B-206ENST00000542136 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
TNFSF13B-206ENST00000542136 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
TNFSF13B-206ENST00000542136 BCAR3O75815 825 aa17.36■□□□□ 0.37
TNFSF13B-206ENST00000542136 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
TNFSF13B-206ENST00000542136 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
TNFSF13B-206ENST00000542136 DPY19L2Q6NUT2 758 aa17.36■□□□□ 0.37
TNFSF13B-206ENST00000542136 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
TNFSF13B-206ENST00000542136 ZNF277Q9NRM2 450 aaPredicted RBP17.35■□□□□ 0.37
TNFSF13B-206ENST00000542136 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
TNFSF13B-206ENST00000542136 TAF1P21675 1872 aa17.35■□□□□ 0.37
TNFSF13B-206ENST00000542136 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
TNFSF13B-206ENST00000542136 TRIM27P14373 513 aa17.34■□□□□ 0.37
TNFSF13B-206ENST00000542136 ITGA6P23229 1130 aa17.34■□□□□ 0.37
TNFSF13B-206ENST00000542136 RABL6Q3YEC7 729 aaPredicted RBP17.34■□□□□ 0.37
TNFSF13B-206ENST00000542136 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
TNFSF13B-206ENST00000542136 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
TNFSF13B-206ENST00000542136 GPBP1L1Q9HC44 474 aaPredicted RBP17.34■□□□□ 0.37
TNFSF13B-206ENST00000542136 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.36
TNFSF13B-206ENST00000542136 FZD9O00144 591 aa17.33■□□□□ 0.36
TNFSF13B-206ENST00000542136 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
TNFSF13B-206ENST00000542136 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.36
TNFSF13B-206ENST00000542136 KAZALD1Q96I82 304 aa17.33■□□□□ 0.36
TNFSF13B-206ENST00000542136 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
TNFSF13B-206ENST00000542136 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
TNFSF13B-206ENST00000542136 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
TNFSF13B-206ENST00000542136 CCDC57Q2TAC2 916 aa17.32■□□□□ 0.36
TNFSF13B-206ENST00000542136 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
TNFSF13B-206ENST00000542136 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13B-206ENST00000542136 XDHP47989 1333 aa17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 GPSM2P81274 684 aa17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 CCDC85AQ96PX6 553 aaPredicted RBP17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 EYA3Q99504 573 aa17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
TNFSF13B-206ENST00000542136 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 TIAM2Q8IVF5 1701 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 COL4A1P02462 1669 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 GNAI3P08754 354 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 MS4A1P11836 297 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 WASHC4Q2M389 1173 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 LARGE2Q8N3Y3 721 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 ANKIB1Q9P2G1 1089 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 POLLQ9UGP5 575 aa17.3■□□□□ 0.36
TNFSF13B-206ENST00000542136 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
TNFSF13B-206ENST00000542136 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13B-206ENST00000542136 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
TNFSF13B-206ENST00000542136 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms