RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 NPC1L1Q9UHC9 1359 aa10.37□□□□□ -0.75
NPIPB4-215ENST00000542133 AKAP11Q9UKA4 1901 aa10.37□□□□□ -0.75
NPIPB4-215ENST00000542133 CDHR2Q9BYE9 1310 aa10.36□□□□□ -0.75
NPIPB4-215ENST00000542133 FGD1P98174 961 aa10.36□□□□□ -0.75
NPIPB4-215ENST00000542133 RASEFQ8IZ41 740 aa10.36□□□□□ -0.75
NPIPB4-215ENST00000542133 RNF186Q9NXI6 227 aa10.36□□□□□ -0.75
NPIPB4-215ENST00000542133 NIP7Q9Y221 180 aaKnown RBP eCLIP10.36□□□□□ -0.75
NPIPB4-215ENST00000542133 TRPA1O75762 1119 aa10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 HMOX1P09601 288 aa10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 PIP4K2AP48426 406 aaPredicted RBP10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 GMPSP49915 693 aaPredicted RBP10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 HIRAP54198 1017 aaPredicted RBP10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 KIF23Q02241 960 aaPredicted RBP10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 RGMBQ6NW40 437 aa10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 CDC37L1Q7L3B6 337 aa10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 TRPM4Q8TD43 1214 aa10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 FMNL2Q96PY5 1086 aa10.35□□□□□ -0.75
NPIPB4-215ENST00000542133 FAM177BA6PVY3 158 aa10.34□□□□□ -0.75
NPIPB4-215ENST00000542133 RGL2O15211 777 aa10.34□□□□□ -0.75
NPIPB4-215ENST00000542133 PPIP5K2O43314 1243 aa10.34□□□□□ -0.75
NPIPB4-215ENST00000542133 CXCL9Q07325 125 aa10.34□□□□□ -0.75
NPIPB4-215ENST00000542133 GRIPAP1Q4V328 841 aa10.34□□□□□ -0.75
NPIPB4-215ENST00000542133 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 FXR1P51114 621 aaKnown RBP eCLIP10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 TEFQ10587 303 aa10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 AOC3Q16853 763 aa10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 DLK2Q6UY11 383 aa10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 MORC1Q86VD1 984 aa10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 MKI67P46013 3256 aaKnown RBP10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
NPIPB4-215ENST00000542133 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 SLC10A3P09131 477 aa10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 PKN2Q16513 984 aaKnown RBP10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 IL17REQ8NFR9 667 aa10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 KIF12Q96FN5 646 aa10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 GBA2Q9HCG7 927 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 ZNRF3Q9ULT6 936 aa10.32□□□□□ -0.76
NPIPB4-215ENST00000542133 CEMIPQ8WUJ3 1361 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 SHTN1A0MZ66 631 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 PRAMEF22A3QJZ6 481 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 KCNQ3O43525 872 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 GTF2E1P29083 439 aaPredicted RBP10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 ZNF157P51786 506 aaPredicted RBP10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 NUTM1Q86Y26 1132 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 RPGRQ92834 1020 aaKnown RBP10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 CSRNP1Q96S65 589 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 POLR3GLQ9BT43 218 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 USP16Q9Y5T5 823 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 LAMB4A4D0S4 1761 aa10.31□□□□□ -0.76
NPIPB4-215ENST00000542133 IBTKQ9P2D0 1353 aaPredicted RBP10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 NBPF26B4DH59 902 aa10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 HLFQ16534 295 aa10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 ASTLQ6HA08 431 aaPredicted RBP10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 NBPF10Q6P3W6 841 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 CRAMP1Q96RY5 1269 aa10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 BCL2L13Q9BXK5 485 aa10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 VPS33BQ9H267 617 aa10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 HTTP42858 3142 aa10.3□□□□□ -0.76
NPIPB4-215ENST00000542133 RBBP6Q7Z6E9 1792 aaKnown RBP10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 GNAT3A8MTJ3 354 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 MAP3K13O43283 966 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 KRT26Q7Z3Y9 468 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 C2orf69Q8N8R5 385 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 ZNF296Q8WUU4 475 aaPredicted RBP10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 NYXQ9GZU5 481 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 PANK3Q9H999 370 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 DUOX1Q9NRD9 1551 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 SZT2Q5T011 3432 aa10.29□□□□□ -0.76
NPIPB4-215ENST00000542133 NUP98P52948 1817 aa10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 ADM5C9JUS6 153 aa10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 RAD17O75943 681 aa10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 FBXO46Q6PJ61 603 aaPredicted RBP10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 RBM17Q96I25 401 aaKnown RBP10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 CNOT7Q9UIV1 285 aaKnown RBP10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 HDAC9Q9UKV0 1011 aa10.28□□□□□ -0.76
NPIPB4-215ENST00000542133 BTBD11A6QL63 1104 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 KIAA2012Q0VF49 1180 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 TNIP1Q15025 636 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 SUPT20HQ8NEM7 779 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 GAS2L2Q8NHY3 880 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 METRNQ9UJH8 293 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 COL3A1P02461 1466 aaPredicted RBP10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 UBN2Q6ZU65 1347 aa10.27□□□□□ -0.77
NPIPB4-215ENST00000542133 PAPPA2Q9BXP8 1791 aa10.26□□□□□ -0.77
NPIPB4-215ENST00000542133 CUL9Q8IWT3 2517 aa10.26□□□□□ -0.77
NPIPB4-215ENST00000542133 YDJCA8MPS7 323 aa10.26□□□□□ -0.77
NPIPB4-215ENST00000542133 H7C1D1 291 aa10.26□□□□□ -0.77
NPIPB4-215ENST00000542133 EGFRP00533 1210 aa10.26□□□□□ -0.77
NPIPB4-215ENST00000542133 SNRPA1P09661 255 aaKnown RBP10.26□□□□□ -0.77
NPIPB4-215ENST00000542133 SAMD7Q7Z3H4 446 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms