RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
ITM2C-208ENST00000541852 ADARB2Q9NS39 739 aaKnown RBP19.4■□□□□ 0.7
ITM2C-208ENST00000541852 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.7
ITM2C-208ENST00000541852 KIAA2012Q0VF49 1180 aa19.39■□□□□ 0.69
ITM2C-208ENST00000541852 GPRC5DQ9NZD1 345 aa19.39■□□□□ 0.69
ITM2C-208ENST00000541852 CTCFP49711 727 aaPredicted RBP19.38■□□□□ 0.69
ITM2C-208ENST00000541852 MAP2K1Q02750 393 aaPredicted RBP19.38■□□□□ 0.69
ITM2C-208ENST00000541852 CXCL9Q07325 125 aa19.38■□□□□ 0.69
ITM2C-208ENST00000541852 SF3B3Q15393 1217 aaKnown RBP19.38■□□□□ 0.69
ITM2C-208ENST00000541852 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
ITM2C-208ENST00000541852 ANKRD36CQ5JPF3 1778 aa19.38■□□□□ 0.69
ITM2C-208ENST00000541852 DUSP27Q5VZP5 1158 aa19.38■□□□□ 0.69
ITM2C-208ENST00000541852 CIAPIN1Q6FI81 312 aa19.38■□□□□ 0.69
ITM2C-208ENST00000541852 ISCA1Q9BUE6 129 aa19.38■□□□□ 0.69
ITM2C-208ENST00000541852 CDHR2Q9BYE9 1310 aa19.38■□□□□ 0.69
ITM2C-208ENST00000541852 PRKRIP1Q9H875 184 aaPredicted RBP19.38■□□□□ 0.69
ITM2C-208ENST00000541852 ABT1Q9ULW3 272 aaKnown RBP19.38■□□□□ 0.69
ITM2C-208ENST00000541852 ZC3H15Q8WU90 426 aaKnown RBP19.37■□□□□ 0.69
ITM2C-208ENST00000541852 ECE1P42892 770 aa19.36■□□□□ 0.69
ITM2C-208ENST00000541852 GNAI1P63096 354 aa19.36■□□□□ 0.69
ITM2C-208ENST00000541852 BCL2L13Q9BXK5 485 aa19.36■□□□□ 0.69
ITM2C-208ENST00000541852 IFT57Q9NWB7 429 aa19.36■□□□□ 0.69
ITM2C-208ENST00000541852 WBP1LQ9NX94 342 aa19.36■□□□□ 0.69
ITM2C-208ENST00000541852 COL4A5P29400 1685 aa19.36■□□□□ 0.69
ITM2C-208ENST00000541852 WDR33Q9C0J8 1336 aaKnown RBP19.35■□□□□ 0.69
ITM2C-208ENST00000541852 ZNF853P0CG23 659 aa19.35■□□□□ 0.69
ITM2C-208ENST00000541852 PGAP2Q9UHJ9 254 aa19.35■□□□□ 0.69
ITM2C-208ENST00000541852 FOXN1O15353 648 aa19.34■□□□□ 0.69
ITM2C-208ENST00000541852 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
ITM2C-208ENST00000541852 WASHC4Q2M389 1173 aa19.34■□□□□ 0.69
ITM2C-208ENST00000541852 RIC3Q7Z5B4 369 aa19.34■□□□□ 0.69
ITM2C-208ENST00000541852 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
ITM2C-208ENST00000541852 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
ITM2C-208ENST00000541852 ATP5J2-PTCD1G3V325 749 aa19.33■□□□□ 0.68
ITM2C-208ENST00000541852 H7C1D1 291 aa19.33■□□□□ 0.68
ITM2C-208ENST00000541852 GMPSP49915 693 aaPredicted RBP19.33■□□□□ 0.68
ITM2C-208ENST00000541852 IRS4O14654 1257 aaPredicted RBP19.32■□□□□ 0.68
ITM2C-208ENST00000541852 APAF1O14727 1248 aa19.32■□□□□ 0.68
ITM2C-208ENST00000541852 ZBTB38Q8NAP3 1195 aaPredicted RBP19.32■□□□□ 0.68
ITM2C-208ENST00000541852 DPF2Q92785 391 aa19.32■□□□□ 0.68
ITM2C-208ENST00000541852 EYA3Q99504 573 aa19.32■□□□□ 0.68
ITM2C-208ENST00000541852 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
ITM2C-208ENST00000541852 RAD17O75943 681 aa19.31■□□□□ 0.68
ITM2C-208ENST00000541852 DDX58O95786 925 aaKnown RBP19.31■□□□□ 0.68
ITM2C-208ENST00000541852 RPS8P62241 208 aaKnown RBP19.31■□□□□ 0.68
ITM2C-208ENST00000541852 CCDC191Q8NCU4 936 aa19.31■□□□□ 0.68
ITM2C-208ENST00000541852 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
ITM2C-208ENST00000541852 CNOT7Q9UIV1 285 aaKnown RBP19.31■□□□□ 0.68
ITM2C-208ENST00000541852 LAMB2P55268 1798 aa19.31■□□□□ 0.68
ITM2C-208ENST00000541852 CAPN15O75808 1086 aa19.3■□□□□ 0.68
ITM2C-208ENST00000541852 CST9Q5W186 159 aa19.3■□□□□ 0.68
ITM2C-208ENST00000541852 CDC37L1Q7L3B6 337 aa19.3■□□□□ 0.68
ITM2C-208ENST00000541852 SLC51AQ86UW1 340 aa19.3■□□□□ 0.68
ITM2C-208ENST00000541852 TLL2Q9Y6L7 1015 aa19.3■□□□□ 0.68
ITM2C-208ENST00000541852 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
ITM2C-208ENST00000541852 C6orf229H3BNL8 230 aa19.29■□□□□ 0.68
ITM2C-208ENST00000541852 MAP2K2P36507 400 aa19.29■□□□□ 0.68
ITM2C-208ENST00000541852 CCDC30Q5VVM6 783 aa19.29■□□□□ 0.68
ITM2C-208ENST00000541852 CELF1Q92879 486 aaKnown RBP19.29■□□□□ 0.68
ITM2C-208ENST00000541852 HHIPL1Q96JK4 782 aa19.29■□□□□ 0.68
ITM2C-208ENST00000541852 CAPNS2Q96L46 248 aa19.29■□□□□ 0.68
ITM2C-208ENST00000541852 GPR101Q96P66 508 aaPredicted RBP19.29■□□□□ 0.68
ITM2C-208ENST00000541852 TRPM7Q96QT4 1865 aa19.28■□□□□ 0.68
ITM2C-208ENST00000541852 RPS12P25398 132 aaKnown RBP19.28■□□□□ 0.68
ITM2C-208ENST00000541852 YDJCA8MPS7 323 aa19.27■□□□□ 0.68
ITM2C-208ENST00000541852 TRAF5O00463 557 aa19.27■□□□□ 0.68
ITM2C-208ENST00000541852 CCDC152Q4G0S7 254 aa19.27■□□□□ 0.68
ITM2C-208ENST00000541852 PAXIP1Q6ZW49 1069 aaPredicted RBP19.27■□□□□ 0.68
ITM2C-208ENST00000541852 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
ITM2C-208ENST00000541852 PDE8AO60658 829 aa19.26■□□□□ 0.67
ITM2C-208ENST00000541852 CELF2O95319 508 aaKnown RBP19.26■□□□□ 0.67
ITM2C-208ENST00000541852 PCCAP05165 728 aaPredicted RBP19.26■□□□□ 0.67
ITM2C-208ENST00000541852 LBX1P52954 281 aa19.26■□□□□ 0.67
ITM2C-208ENST00000541852 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
ITM2C-208ENST00000541852 PHAXQ9H814 394 aaKnown RBP19.26■□□□□ 0.67
ITM2C-208ENST00000541852 CWC25Q9NXE8 425 aaPredicted RBP19.26■□□□□ 0.67
ITM2C-208ENST00000541852 PODXL2Q9NZ53 605 aa19.26■□□□□ 0.67
ITM2C-208ENST00000541852 POLLQ9UGP5 575 aa19.26■□□□□ 0.67
ITM2C-208ENST00000541852 G3V3G9 751 aa19.25■□□□□ 0.67
ITM2C-208ENST00000541852 ELL2O00472 640 aaPredicted RBP19.25■□□□□ 0.67
ITM2C-208ENST00000541852 GPSM2P81274 684 aa19.25■□□□□ 0.67
ITM2C-208ENST00000541852 DCAF8Q5TAQ9 597 aa19.25■□□□□ 0.67
ITM2C-208ENST00000541852 SAPCD2Q86UD0 394 aa19.25■□□□□ 0.67
ITM2C-208ENST00000541852 METTL22Q9BUU2 404 aaPredicted RBP19.25■□□□□ 0.67
ITM2C-208ENST00000541852 TAF1P21675 1872 aa19.24■□□□□ 0.67
ITM2C-208ENST00000541852 PSMD14O00487 310 aa19.24■□□□□ 0.67
ITM2C-208ENST00000541852 RIMBP2O15034 1052 aa19.24■□□□□ 0.67
ITM2C-208ENST00000541852 CA12O43570 354 aa19.24■□□□□ 0.67
ITM2C-208ENST00000541852 HIRAP54198 1017 aaPredicted RBP19.24■□□□□ 0.67
ITM2C-208ENST00000541852 FMR1Q06787 632 aaKnown RBP eCLIP19.24■□□□□ 0.67
ITM2C-208ENST00000541852 MICALL2Q8IY33 904 aa19.24■□□□□ 0.67
ITM2C-208ENST00000541852 TBC1D16Q8TBP0 767 aa19.24■□□□□ 0.67
ITM2C-208ENST00000541852 MYD88Q99836 296 aa19.24■□□□□ 0.67
ITM2C-208ENST00000541852 DDX60Q8IY21 1712 aaKnown RBP19.24■□□□□ 0.67
ITM2C-208ENST00000541852 LRRC37AA6NMS7 1700 aa19.23■□□□□ 0.67
ITM2C-208ENST00000541852 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
ITM2C-208ENST00000541852 CYP4F22Q6NT55 531 aa19.23■□□□□ 0.67
ITM2C-208ENST00000541852 C8orf58Q8NAV2 365 aa19.23■□□□□ 0.67
ITM2C-208ENST00000541852 ZNF428Q96B54 188 aa19.23■□□□□ 0.67
ITM2C-208ENST00000541852 GLIS2Q9BZE0 524 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms