RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 CYP19A1P11511 503 aaPredicted RBP10.42□□□□□ -0.74
LMO3-226ENST00000541589 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
LMO3-226ENST00000541589 CANXP27824 592 aaKnown RBP10.42□□□□□ -0.74
LMO3-226ENST00000541589 MAP2K1Q02750 393 aaPredicted RBP10.42□□□□□ -0.74
LMO3-226ENST00000541589 DEFB115Q30KQ5 88 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 AMOTQ4VCS5 1084 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 ZNF530Q6P9A1 599 aaPredicted RBP10.42□□□□□ -0.74
LMO3-226ENST00000541589 DNAJC10Q8IXB1 793 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 COL15A1P39059 1388 aa10.41□□□□□ -0.74
LMO3-226ENST00000541589 CCDC85CA6NKD9 419 aa10.41□□□□□ -0.74
LMO3-226ENST00000541589 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
LMO3-226ENST00000541589 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
LMO3-226ENST00000541589 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
LMO3-226ENST00000541589 TAOK3Q9H2K8 898 aa10.41□□□□□ -0.74
LMO3-226ENST00000541589 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
LMO3-226ENST00000541589 WDR33Q9C0J8 1336 aaKnown RBP10.41□□□□□ -0.74
LMO3-226ENST00000541589 ADAMTSL1Q8N6G6 1762 aa10.4□□□□□ -0.74
LMO3-226ENST00000541589 EMP3P54852 163 aa10.4□□□□□ -0.74
LMO3-226ENST00000541589 TMC2Q8TDI7 906 aa10.4□□□□□ -0.74
LMO3-226ENST00000541589 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
LMO3-226ENST00000541589 BRIP1Q9BX63 1249 aa10.4□□□□□ -0.74
LMO3-226ENST00000541589 ZBTB1Q9Y2K1 713 aa10.4□□□□□ -0.74
LMO3-226ENST00000541589 SCN4AP35499 1836 aa10.39□□□□□ -0.75
LMO3-226ENST00000541589 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
LMO3-226ENST00000541589 MTHFSDQ2M296 383 aaKnown RBP10.39□□□□□ -0.75
LMO3-226ENST00000541589 ALDH1L2Q3SY69 923 aa10.39□□□□□ -0.75
LMO3-226ENST00000541589 ZNF622Q969S3 477 aaKnown RBP eCLIP10.39□□□□□ -0.75
LMO3-226ENST00000541589 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
LMO3-226ENST00000541589 LAS1LQ9Y4W2 734 aaKnown RBP10.39□□□□□ -0.75
LMO3-226ENST00000541589 ANKRD31Q8N7Z5 1873 aa10.39□□□□□ -0.75
LMO3-226ENST00000541589 THSD7BQ9C0I4 1608 aa10.38□□□□□ -0.75
LMO3-226ENST00000541589 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
LMO3-226ENST00000541589 MS4A1P11836 297 aa10.38□□□□□ -0.75
LMO3-226ENST00000541589 PDE6BP35913 854 aa10.38□□□□□ -0.75
LMO3-226ENST00000541589 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
LMO3-226ENST00000541589 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
LMO3-226ENST00000541589 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
LMO3-226ENST00000541589 SMC4Q9NTJ3 1288 aa10.38□□□□□ -0.75
LMO3-226ENST00000541589 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 AAMPQ13685 434 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 C1orf141Q5JVX7 400 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 CNTROBQ8N137 903 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 SSH1Q8WYL5 1049 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 RTF1Q92541 710 aaKnown RBP10.37□□□□□ -0.75
LMO3-226ENST00000541589 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 KIF16BQ96L93 1317 aa10.37□□□□□ -0.75
LMO3-226ENST00000541589 COL11A2P13942 1736 aaPredicted RBP10.37□□□□□ -0.75
LMO3-226ENST00000541589 TNRC18O15417 2968 aaPredicted RBP10.37□□□□□ -0.75
LMO3-226ENST00000541589 CHL1O00533 1208 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 BRPF1P55201 1214 aaPredicted RBP10.36□□□□□ -0.75
LMO3-226ENST00000541589 EAPPQ56P03 285 aaPredicted RBP10.36□□□□□ -0.75
LMO3-226ENST00000541589 TBC1D9BQ66K14 1250 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 PRR5LQ6MZQ0 368 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 HACL1Q9UJ83 578 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 ZNF541Q9H0D2 1346 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 VAMP4O75379 141 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 EPHX2P34913 555 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 EIF5P55010 431 aaKnown RBP10.36□□□□□ -0.75
LMO3-226ENST00000541589 SOGA3Q5TF21 947 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 MAP1SQ66K74 1059 aaPredicted RBP10.36□□□□□ -0.75
LMO3-226ENST00000541589 STYK1Q6J9G0 422 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 PRPF40BQ6NWY9 871 aaKnown RBP10.36□□□□□ -0.75
LMO3-226ENST00000541589 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 MCM10Q7L590 875 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 PNMA8AQ86V59 439 aaPredicted RBP10.36□□□□□ -0.75
LMO3-226ENST00000541589 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 PANK1Q8TE04 598 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 CNKSR1Q969H4 720 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 SLC52A2Q9HAB3 445 aa10.36□□□□□ -0.75
LMO3-226ENST00000541589 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
LMO3-226ENST00000541589 SLX4Q8IY92 1834 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 MRC1P22897 1456 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 GNAT3A8MTJ3 354 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
LMO3-226ENST00000541589 SRGNP10124 158 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 TWISTNBQ3B726 338 aaPredicted RBP10.35□□□□□ -0.75
LMO3-226ENST00000541589 DZIP1LQ8IYY4 767 aaKnown RBP10.35□□□□□ -0.75
LMO3-226ENST00000541589 CCDC24Q8N4L8 307 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 CAPNS2Q96L46 248 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 DDX21Q9NR30 783 aaKnown RBP eCLIP10.35□□□□□ -0.75
LMO3-226ENST00000541589 ABT1Q9ULW3 272 aaKnown RBP10.35□□□□□ -0.75
LMO3-226ENST00000541589 COG6Q9Y2V7 657 aa10.35□□□□□ -0.75
LMO3-226ENST00000541589 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
LMO3-226ENST00000541589 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
LMO3-226ENST00000541589 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
LMO3-226ENST00000541589 CENPQQ7L2Z9 268 aaPredicted RBP10.34□□□□□ -0.75
LMO3-226ENST00000541589 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
LMO3-226ENST00000541589 MCOLN1Q9GZU1 580 aa10.34□□□□□ -0.75
LMO3-226ENST00000541589 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
LMO3-226ENST00000541589 FZD9O00144 591 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 RLBP1P12271 317 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 ECE1P42892 770 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 FOXK1P85037 733 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms