RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 MYL6BP14649 208 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 CHMLP26374 656 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 FOSBP53539 338 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 NCBP1Q09161 790 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 G2E3Q7L622 706 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 STK11IPQ8N1F8 1099 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 LRRC59Q96AG4 307 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 C19orf44Q9H6X5 657 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 PES1O00541 588 aaKnown RBP6.18□□□□□ -1.42
PROM1-220ENST00000540805 TRIM66O15016 1216 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 SYCP1Q15431 976 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 TSHZ3Q63HK5 1081 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 FUCA2Q9BTY2 467 aa6.18□□□□□ -1.42
PROM1-220ENST00000540805 KDM6AO15550 1401 aaPredicted RBP6.17□□□□□ -1.42
PROM1-220ENST00000540805 TATP17735 454 aaPredicted RBP6.17□□□□□ -1.42
PROM1-220ENST00000540805 GABPB1Q06547 395 aaPredicted RBP6.17□□□□□ -1.42
PROM1-220ENST00000540805 WASHC4Q2M389 1173 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 IL17RAQ96F46 866 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 PRM3Q9NNZ6 103 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 PXDNLA1KZ92 1463 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 PHLPP1O60346 1717 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 STX6O43752 255 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 F13A1P00488 732 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 CCDC192P0DO97 292 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 LRRCC1Q9C099 1032 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 LGR6Q9HBX8 967 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 EXOC6BQ9Y2D4 811 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.17□□□□□ -1.42
PROM1-220ENST00000540805 AHDC1Q5TGY3 1603 aaPredicted RBP6.17□□□□□ -1.42
PROM1-220ENST00000540805 TNS3Q68CZ2 1445 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 SALL3Q9BXA9 1300 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 WNK3Q9BYP7 1800 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 EPB41L2O43491 1005 aaKnown RBP6.17□□□□□ -1.42
PROM1-220ENST00000540805 TERF2Q15554 542 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 ZNF219Q9P2Y4 722 aaPredicted RBP6.17□□□□□ -1.42
PROM1-220ENST00000540805 LCMT1Q9UIC8 334 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 SMC3Q9UQE7 1217 aa6.17□□□□□ -1.42
PROM1-220ENST00000540805 LAMB4A4D0S4 1761 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 SMTNL1A8MU46 457 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 NRDCO43847 1150 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 HNRNPH2P55795 449 aaKnown RBP6.16□□□□□ -1.42
PROM1-220ENST00000540805 AKAP17AQ02040 695 aaKnown RBP6.16□□□□□ -1.42
PROM1-220ENST00000540805 CNPY4Q8N129 248 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 NFATC2IPQ8NCF5 419 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 UPF1Q92900 1129 aaKnown RBP eCLIP6.16□□□□□ -1.42
PROM1-220ENST00000540805 C16orf45Q96MC5 204 aaPredicted RBP6.16□□□□□ -1.42
PROM1-220ENST00000540805 CTNNA3Q9UI47 895 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 GNAI2P04899 355 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 PTGS1P23219 599 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 CCT4P50991 539 aaKnown RBP6.16□□□□□ -1.42
PROM1-220ENST00000540805 CABP4P57796 275 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 LRMPQ12912 555 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 TIGD1Q96MW7 591 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 ERBB3P21860 1342 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 CPDO75976 1380 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 NUP188Q5SRE5 1749 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 GNAT3A8MTJ3 354 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 TNNT1P13805 278 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 SYT1P21579 422 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 HSPA4P34932 840 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 PLEKHO1Q53GL0 409 aaPredicted RBP6.16□□□□□ -1.42
PROM1-220ENST00000540805 KRT28Q7Z3Y7 464 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 FAM200AQ8TCP9 573 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 ZNF592Q92610 1267 aa6.16□□□□□ -1.42
PROM1-220ENST00000540805 FEZ2Q9UHY8 353 aaPredicted RBP6.16□□□□□ -1.42
PROM1-220ENST00000540805 COL22A1Q8NFW1 1626 aaPredicted RBP6.16□□□□□ -1.42
PROM1-220ENST00000540805 SURF6O75683 361 aaKnown RBP6.15□□□□□ -1.42
PROM1-220ENST00000540805 IKQ13123 557 aaPredicted RBP6.15□□□□□ -1.42
PROM1-220ENST00000540805 HDGFL1Q5TGJ6 251 aa6.15□□□□□ -1.42
PROM1-220ENST00000540805 GTF3C6Q969F1 213 aa6.15□□□□□ -1.42
PROM1-220ENST00000540805 SIL1Q9H173 461 aa6.15□□□□□ -1.42
PROM1-220ENST00000540805 RSPH14Q9UHP6 348 aa6.15□□□□□ -1.42
PROM1-220ENST00000540805 KCNQ3O43525 872 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 SLC4A2P04920 1241 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 CHRNA2Q15822 529 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 KCNH5Q8NCM2 988 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 NEK11Q8NG66 645 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 BABAM1Q9NWV8 329 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 EP400Q96L91 3159 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 ANKRD65E5RJM6 399 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 ATP2B1P20020 1258 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 ATP2B2Q01814 1243 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 MPRIPQ6WCQ1 1025 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 CCDC112Q8NEF3 446 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.43
PROM1-220ENST00000540805 LIMCH1Q9UPQ0 1083 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 AOX1Q06278 1338 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 SPATA31A3Q5VYP0 1347 aa6.15□□□□□ -1.43
PROM1-220ENST00000540805 UBTFL1P0CB47 393 aaPredicted RBP6.14□□□□□ -1.43
PROM1-220ENST00000540805 AK2P54819 239 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 DNM1Q05193 864 aaKnown RBP6.14□□□□□ -1.43
PROM1-220ENST00000540805 SYNE3Q6ZMZ3 975 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 BRINP3Q76B58 766 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 STAP2Q9UGK3 403 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 DDX41Q9UJV9 622 aaKnown RBP6.14□□□□□ -1.43
PROM1-220ENST00000540805 PAXBP1Q9Y5B6 917 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 RAD50Q92878 1312 aa6.14□□□□□ -1.43
PROM1-220ENST00000540805 PLCH1Q4KWH8 1693 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms