RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 BBOX1O75936 387 aa19.49■□□□□ 0.71
DDB1-218ENST00000540784 CSF1RP07333 972 aa19.49■□□□□ 0.71
DDB1-218ENST00000540784 RLBP1P12271 317 aa19.49■□□□□ 0.71
DDB1-218ENST00000540784 YBX3P16989 372 aaKnown RBP eCLIP19.49■□□□□ 0.718e-12■□□□□ 9.5
DDB1-218ENST00000540784 FOXO4P98177 505 aa19.49■□□□□ 0.71
DDB1-218ENST00000540784 PRPF40BQ6NWY9 871 aaKnown RBP19.49■□□□□ 0.71
DDB1-218ENST00000540784 PANK1Q8TE04 598 aa19.49■□□□□ 0.71
DDB1-218ENST00000540784 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
DDB1-218ENST00000540784 GNAI3P08754 354 aa19.48■□□□□ 0.71
DDB1-218ENST00000540784 UBTFL1P0CB47 393 aaPredicted RBP19.48■□□□□ 0.71
DDB1-218ENST00000540784 ITPRIPQ8IWB1 547 aa19.48■□□□□ 0.71
DDB1-218ENST00000540784 SUCLG2Q96I99 432 aa19.48■□□□□ 0.71
DDB1-218ENST00000540784 C21orf2O43822 256 aa19.47■□□□□ 0.71
DDB1-218ENST00000540784 GRAPQ13588 217 aa19.47■□□□□ 0.71
DDB1-218ENST00000540784 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
DDB1-218ENST00000540784 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
DDB1-218ENST00000540784 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
DDB1-218ENST00000540784 GRAPLQ8TC17 118 aaPredicted RBP19.47■□□□□ 0.71
DDB1-218ENST00000540784 TMX4Q9H1E5 349 aaPredicted RBP19.47■□□□□ 0.71
DDB1-218ENST00000540784 KIAA1551Q9HCM1 1747 aa19.46■□□□□ 0.71
DDB1-218ENST00000540784 RPS8P62241 208 aaKnown RBP19.46■□□□□ 0.71
DDB1-218ENST00000540784 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
DDB1-218ENST00000540784 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
DDB1-218ENST00000540784 MEIS3Q99687 375 aa19.46■□□□□ 0.71
DDB1-218ENST00000540784 GREM2Q9H772 168 aa19.46■□□□□ 0.71
DDB1-218ENST00000540784 SEC31BQ9NQW1 1179 aa19.46■□□□□ 0.71
DDB1-218ENST00000540784 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
DDB1-218ENST00000540784 PPEF1O14829 653 aaPredicted RBP19.45■□□□□ 0.7
DDB1-218ENST00000540784 C7orf43Q8WVR3 580 aa19.45■□□□□ 0.7
DDB1-218ENST00000540784 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
DDB1-218ENST00000540784 ZBTB7BO15156 539 aaPredicted RBP19.44■□□□□ 0.7
DDB1-218ENST00000540784 SOGA3Q5TF21 947 aa19.44■□□□□ 0.7
DDB1-218ENST00000540784 TMC4Q7Z404 712 aa19.44■□□□□ 0.7
DDB1-218ENST00000540784 CELF1Q92879 486 aaKnown RBP19.44■□□□□ 0.7
DDB1-218ENST00000540784 CDC5LQ99459 802 aaKnown RBP19.44■□□□□ 0.7
DDB1-218ENST00000540784 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
DDB1-218ENST00000540784 DDX60Q8IY21 1712 aaKnown RBP19.43■□□□□ 0.7
DDB1-218ENST00000540784 ANKRD18BA2A2Z9 1011 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 ITGA6P23229 1130 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 RRP1P56182 461 aaKnown RBP19.43■□□□□ 0.7
DDB1-218ENST00000540784 IFIT5Q13325 482 aaKnown RBP19.43■□□□□ 0.7
DDB1-218ENST00000540784 CCDC57Q2TAC2 916 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 CC2D2BQ6DHV5 1058 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 COG6Q9Y2V7 657 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 ATP6V0A2Q9Y487 856 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 RTL9Q8NET4 1388 aa19.43■□□□□ 0.7
DDB1-218ENST00000540784 GNAI2P04899 355 aa19.42■□□□□ 0.7
DDB1-218ENST00000540784 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
DDB1-218ENST00000540784 FAM161AQ3B820 660 aa19.42■□□□□ 0.7
DDB1-218ENST00000540784 C20orf194Q5TEA3 1177 aa19.42■□□□□ 0.7
DDB1-218ENST00000540784 LRRFIP2Q9Y608 721 aaKnown RBP19.42■□□□□ 0.7
DDB1-218ENST00000540784 COL11A2P13942 1736 aaPredicted RBP19.42■□□□□ 0.7
DDB1-218ENST00000540784 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
DDB1-218ENST00000540784 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
DDB1-218ENST00000540784 CCDC93Q567U6 631 aa19.41■□□□□ 0.7
DDB1-218ENST00000540784 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
DDB1-218ENST00000540784 ANKRD44Q8N8A2 993 aa19.41■□□□□ 0.7
DDB1-218ENST00000540784 CHMP4BQ9H444 224 aaKnown RBP19.41■□□□□ 0.7
DDB1-218ENST00000540784 DDX19BQ9UMR2 479 aa19.41■□□□□ 0.7
DDB1-218ENST00000540784 IGHMBP2P38935 993 aaKnown RBP19.4■□□□□ 0.7
DDB1-218ENST00000540784 TAF7LQ5H9L4 462 aa19.4■□□□□ 0.7
DDB1-218ENST00000540784 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
DDB1-218ENST00000540784 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
DDB1-218ENST00000540784 DLEC1Q9Y238 1755 aa19.39■□□□□ 0.7
DDB1-218ENST00000540784 MPHOSPH8Q99549 860 aa19.39■□□□□ 0.69
DDB1-218ENST00000540784 SLX4Q8IY92 1834 aa19.39■□□□□ 0.69
DDB1-218ENST00000540784 LAMB2P55268 1798 aa19.38■□□□□ 0.69
DDB1-218ENST00000540784 BSDC1Q9NW68 430 aaPredicted RBP19.38■□□□□ 0.69
DDB1-218ENST00000540784 BRCA1P38398 1863 aaKnown RBP19.37■□□□□ 0.69
DDB1-218ENST00000540784 MPNDQ8N594 471 aa19.37■□□□□ 0.69
DDB1-218ENST00000540784 LDHAL6AQ6ZMR3 332 aa19.36■□□□□ 0.69
DDB1-218ENST00000540784 ZNF594Q96JF6 807 aaPredicted RBP19.36■□□□□ 0.69
DDB1-218ENST00000540784 NSFL1CQ9UNZ2 370 aaKnown RBP19.36■□□□□ 0.69
DDB1-218ENST00000540784 DPP8Q6V1X1 898 aaPredicted RBP19.35■□□□□ 0.69
DDB1-218ENST00000540784 TAOK3Q9H2K8 898 aa19.35■□□□□ 0.69
DDB1-218ENST00000540784 MINPP1Q9UNW1 487 aa19.35■□□□□ 0.69
DDB1-218ENST00000540784 NFKBIEO00221 500 aa19.34■□□□□ 0.69
DDB1-218ENST00000540784 FKBP4Q02790 459 aaKnown RBP eCLIP19.34■□□□□ 0.69
DDB1-218ENST00000540784 C1orf115Q9H7X2 142 aa19.34■□□□□ 0.69
DDB1-218ENST00000540784 CNNM1Q9NRU3 951 aa19.34■□□□□ 0.69
DDB1-218ENST00000540784 ZBTB40Q9NUA8 1239 aa19.34■□□□□ 0.69
DDB1-218ENST00000540784 ANKIB1Q9P2G1 1089 aa19.34■□□□□ 0.69
DDB1-218ENST00000540784 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 GPSM2P81274 684 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 ATP8B2P98198 1209 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 MTX1Q13505 466 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 SLC51AQ86UW1 340 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 SUPT20HQ8NEM7 779 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 PSMD1Q99460 953 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 ANKRD2Q9GZV1 360 aa19.33■□□□□ 0.68
DDB1-218ENST00000540784 LTBP3Q9NS15 1303 aa19.32■□□□□ 0.68
DDB1-218ENST00000540784 MYH3P11055 1940 aa19.32■□□□□ 0.68
DDB1-218ENST00000540784 RFX5P48382 616 aaPredicted RBP19.32■□□□□ 0.68
DDB1-218ENST00000540784 RASSF7Q02833 373 aa19.32■□□□□ 0.68
DDB1-218ENST00000540784 KLHDC4Q8TBB5 520 aa19.32■□□□□ 0.68
DDB1-218ENST00000540784 TAF1P21675 1872 aa19.32■□□□□ 0.68
DDB1-218ENST00000540784 ARFGEF1Q9Y6D6 1849 aa19.32■□□□□ 0.68
DDB1-218ENST00000540784 C6orf229H3BNL8 230 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms