RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ERC1Q8IUD2 1116 aa17.59■□□□□ 0.41
CYB561A3-216ENST00000540755 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
CYB561A3-216ENST00000540755 RHPN1Q8TCX5 695 aa17.59■□□□□ 0.41
CYB561A3-216ENST00000540755 COPRSQ9NQ92 184 aa17.59■□□□□ 0.41
CYB561A3-216ENST00000540755 WWC3Q9ULE0 1092 aa17.59■□□□□ 0.41
CYB561A3-216ENST00000540755 C8orf34Q49A92 452 aa17.58■□□□□ 0.41
CYB561A3-216ENST00000540755 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.41
CYB561A3-216ENST00000540755 ARHGEF1Q92888 912 aaKnown RBP17.58■□□□□ 0.41
CYB561A3-216ENST00000540755 NARFQ9UHQ1 456 aa17.58■□□□□ 0.41
CYB561A3-216ENST00000540755 GYS1P13807 737 aa17.57■□□□□ 0.4
CYB561A3-216ENST00000540755 C1QTNF8P60827 252 aa17.57■□□□□ 0.4
CYB561A3-216ENST00000540755 TRAPPC3LQ5T215 181 aa17.57■□□□□ 0.4
CYB561A3-216ENST00000540755 FAM89AQ96GI7 184 aa17.57■□□□□ 0.4
CYB561A3-216ENST00000540755 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
CYB561A3-216ENST00000540755 DDX60Q8IY21 1712 aaKnown RBP17.57■□□□□ 0.4
CYB561A3-216ENST00000540755 BMP2KLQ5H9B9 411 aa17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 OSBPL3Q9H4L5 887 aa17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 TRMT112Q9UI30 125 aaKnown RBP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 SALL3Q9BXA9 1300 aa17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 PTPN12Q05209 780 aaKnown RBP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 G3BP1Q13283 466 aaKnown RBP eCLIP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 SUSD4Q5VX71 490 aa17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 NIP7Q9Y221 180 aaKnown RBP eCLIP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
CYB561A3-216ENST00000540755 BRCA1P38398 1863 aaKnown RBP17.55■□□□□ 0.4
CYB561A3-216ENST00000540755 CSF1RP07333 972 aa17.55■□□□□ 0.4
CYB561A3-216ENST00000540755 UTP14AQ9BVJ6 771 aaKnown RBP17.55■□□□□ 0.4
CYB561A3-216ENST00000540755 BCL2L12Q9HB09 334 aa17.55■□□□□ 0.4
CYB561A3-216ENST00000540755 SH3TC1Q8TE82 1336 aa17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 ZPR1O75312 459 aa17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 USPL1Q5W0Q7 1092 aa17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 CEP350Q5VT06 3117 aa17.54■□□□□ 0.4
CYB561A3-216ENST00000540755 PDE8AO60658 829 aa17.53■□□□□ 0.4
CYB561A3-216ENST00000540755 NTSR2O95665 410 aa17.53■□□□□ 0.4
CYB561A3-216ENST00000540755 TTC22Q5TAA0 569 aa17.53■□□□□ 0.4
CYB561A3-216ENST00000540755 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
CYB561A3-216ENST00000540755 SRP68Q9UHB9 627 aaKnown RBP17.53■□□□□ 0.4
CYB561A3-216ENST00000540755 AOX1Q06278 1338 aa17.53■□□□□ 0.4
CYB561A3-216ENST00000540755 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
CYB561A3-216ENST00000540755 SASH1O94885 1247 aa17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 MX1P20591 662 aa17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 RFC4P35249 363 aa17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 PDE1AP54750 535 aa17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 CTSWP56202 376 aa17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 CLASRPQ8N2M8 674 aaKnown RBP17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 STAP2Q9UGK3 403 aa17.52■□□□□ 0.4
CYB561A3-216ENST00000540755 SYNE4Q8N205 404 aa17.51■□□□□ 0.39
CYB561A3-216ENST00000540755 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
CYB561A3-216ENST00000540755 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 DDR1Q08345 913 aa17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 SIL1Q9H173 461 aa17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 CIAO1O76071 339 aa17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 CCDC57Q2TAC2 916 aa17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 TBC1D9BQ66K14 1250 aa17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
CYB561A3-216ENST00000540755 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
CYB561A3-216ENST00000540755 TGFB2P61812 414 aa17.49■□□□□ 0.39
CYB561A3-216ENST00000540755 EYA2O00167 538 aa17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 DPEP1P16444 411 aa17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 IL15P40933 162 aaPredicted RBP17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 NUTM1Q86Y26 1132 aa17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 SETDB2Q96T68 719 aa17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 NYXQ9GZU5 481 aa17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
CYB561A3-216ENST00000540755 AK9Q5TCS8 1911 aa17.47■□□□□ 0.39
CYB561A3-216ENST00000540755 FAM177BA6PVY3 158 aa17.47■□□□□ 0.39
CYB561A3-216ENST00000540755 ATG9AQ7Z3C6 839 aa17.47■□□□□ 0.39
CYB561A3-216ENST00000540755 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
CYB561A3-216ENST00000540755 ARFGEF1Q9Y6D6 1849 aa17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 ANKRD18BA2A2Z9 1011 aa17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 IFIT2P09913 472 aaKnown RBP17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 KCNA3P22001 575 aa17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 ITGA6P23229 1130 aa17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 AACSQ86V21 672 aa17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 GREM2Q9H772 168 aa17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 PARP3Q9Y6F1 533 aa17.46■□□□□ 0.39
CYB561A3-216ENST00000540755 NRXN2Q9P2S2 1712 aa17.46■□□□□ 0.38
CYB561A3-216ENST00000540755 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
CYB561A3-216ENST00000540755 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
CYB561A3-216ENST00000540755 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
CYB561A3-216ENST00000540755 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
CYB561A3-216ENST00000540755 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
CYB561A3-216ENST00000540755 GPR108Q9NPR9 543 aa17.45■□□□□ 0.38
CYB561A3-216ENST00000540755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
CYB561A3-216ENST00000540755 POLRMTO00411 1230 aaKnown RBP17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 TFCP2Q12800 502 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 TAF7LQ5H9L4 462 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 PI4K2BQ8TCG2 481 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 ZNF526Q8TF50 670 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms