RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 BCORQ6W2J9 1755 aa11.89□□□□□ -0.51
TRAPPC1-202ENST00000540486 COL4A5P29400 1685 aa11.88□□□□□ -0.51
TRAPPC1-202ENST00000540486 SCN7AQ01118 1682 aa11.88□□□□□ -0.51
TRAPPC1-202ENST00000540486 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC1-202ENST00000540486 CXCL9Q07325 125 aa11.88□□□□□ -0.51
TRAPPC1-202ENST00000540486 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
TRAPPC1-202ENST00000540486 A1BGP04217 495 aa11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 SLC10A3P09131 477 aa11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 CRY2Q49AN0 593 aa11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 NOM1Q5C9Z4 860 aaKnown RBP11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 ZNRF3Q9ULT6 936 aa11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
TRAPPC1-202ENST00000540486 H7C1D1 291 aa11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 GABBR2O75899 941 aa11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 GTF2E1P29083 439 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 ZNF790Q6PG37 636 aa11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 ZNF296Q8WUU4 475 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
TRAPPC1-202ENST00000540486 MKI67P46013 3256 aaKnown RBP11.85□□□□□ -0.51
TRAPPC1-202ENST00000540486 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC1-202ENST00000540486 TNIP1Q15025 636 aa11.85□□□□□ -0.51
TRAPPC1-202ENST00000540486 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
TRAPPC1-202ENST00000540486 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC1-202ENST00000540486 AKAP11Q9UKA4 1901 aa11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 SUPT20HQ8NEM7 779 aa11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 TRPM4Q8TD43 1214 aa11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 FMNL2Q96PY5 1086 aa11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC1-202ENST00000540486 A0A0C4DFX4 3053 aa11.83□□□□□ -0.52
TRAPPC1-202ENST00000540486 IL13P35225 146 aa11.83□□□□□ -0.52
TRAPPC1-202ENST00000540486 AOC3Q16853 763 aa11.83□□□□□ -0.52
TRAPPC1-202ENST00000540486 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
TRAPPC1-202ENST00000540486 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-202ENST00000540486 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-202ENST00000540486 CRAMP1Q96RY5 1269 aa11.83□□□□□ -0.52
TRAPPC1-202ENST00000540486 GPR25O00155 361 aa11.82□□□□□ -0.52
TRAPPC1-202ENST00000540486 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC1-202ENST00000540486 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-202ENST00000540486 RBM17Q96I25 401 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-202ENST00000540486 NYXQ9GZU5 481 aa11.82□□□□□ -0.52
TRAPPC1-202ENST00000540486 CUL9Q8IWT3 2517 aa11.82□□□□□ -0.52
TRAPPC1-202ENST00000540486 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
TRAPPC1-202ENST00000540486 FAM177BA6PVY3 158 aa11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 PPEF1O14829 653 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 TBC1D8O95759 1140 aa11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 TEFQ10587 303 aa11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 MTHFSDQ2M296 383 aaKnown RBP11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 DLK2Q6UY11 383 aa11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 DPF2Q92785 391 aa11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 RTFDC1Q9BY42 306 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 UBR2Q8IWV8 1755 aa11.81□□□□□ -0.52
TRAPPC1-202ENST00000540486 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
TRAPPC1-202ENST00000540486 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-202ENST00000540486 FKTNO75072 461 aa11.8□□□□□ -0.52
TRAPPC1-202ENST00000540486 RASAL3Q86YV0 1011 aa11.8□□□□□ -0.52
TRAPPC1-202ENST00000540486 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
TRAPPC1-202ENST00000540486 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-202ENST00000540486 RAD17O75943 681 aa11.79□□□□□ -0.52
TRAPPC1-202ENST00000540486 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
TRAPPC1-202ENST00000540486 TM4SF4P48230 202 aa11.79□□□□□ -0.52
TRAPPC1-202ENST00000540486 FKBP1BP68106 108 aa11.79□□□□□ -0.52
TRAPPC1-202ENST00000540486 CFHR5Q9BXR6 569 aa11.79□□□□□ -0.52
TRAPPC1-202ENST00000540486 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
TRAPPC1-202ENST00000540486 SAMD7Q7Z3H4 446 aa11.78□□□□□ -0.52
TRAPPC1-202ENST00000540486 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
TRAPPC1-202ENST00000540486 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
TRAPPC1-202ENST00000540486 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
TRAPPC1-202ENST00000540486 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
TRAPPC1-202ENST00000540486 TRIOBPQ9H2D6 2365 aa11.77□□□□□ -0.52
TRAPPC1-202ENST00000540486 ADM5C9JUS6 153 aa11.77□□□□□ -0.53
TRAPPC1-202ENST00000540486 TCERG1O14776 1098 aaKnown RBP11.77□□□□□ -0.53
TRAPPC1-202ENST00000540486 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
TRAPPC1-202ENST00000540486 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.53
TRAPPC1-202ENST00000540486 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
TRAPPC1-202ENST00000540486 PIP4K2AP48426 406 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC1-202ENST00000540486 NUTM1Q86Y26 1132 aa11.76□□□□□ -0.53
TRAPPC1-202ENST00000540486 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
TRAPPC1-202ENST00000540486 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 HMOX1P09601 288 aa11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 EN2P19622 333 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 HLFQ16534 295 aa11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 TBC1D10BQ4KMP7 808 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 DPP8Q6V1X1 898 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-202ENST00000540486 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
TRAPPC1-202ENST00000540486 YDJCA8MPS7 323 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms