RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 TCERG1O14776 1098 aaKnown RBP16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 ITGBL1O95965 494 aaPredicted RBP16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 EPHX2P34913 555 aa16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 ZBTB38Q8NAP3 1195 aaPredicted RBP16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 CCDC191Q8NCU4 936 aa16.94■□□□□ 0.3
SEMA4D-223ENST00000540475 ANP32CO43423 234 aa16.93■□□□□ 0.3
SEMA4D-223ENST00000540475 MPNDQ8N594 471 aa16.93■□□□□ 0.3
SEMA4D-223ENST00000540475 COL4A1P02462 1669 aa16.93■□□□□ 0.3
SEMA4D-223ENST00000540475 IRS4O14654 1257 aaPredicted RBP16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 SCNN1DP51172 638 aa16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 METTL22Q9BUU2 404 aaPredicted RBP16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 CREBZFQ9NS37 354 aa16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
SEMA4D-223ENST00000540475 DDX58O95786 925 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-223ENST00000540475 AOC3Q16853 763 aa16.91■□□□□ 0.3
SEMA4D-223ENST00000540475 NIM1KQ8IY84 436 aa16.91■□□□□ 0.3
SEMA4D-223ENST00000540475 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-223ENST00000540475 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-223ENST00000540475 MYH3P11055 1940 aa16.91■□□□□ 0.3
SEMA4D-223ENST00000540475 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
SEMA4D-223ENST00000540475 HSP90B1P14625 803 aaKnown RBP16.9■□□□□ 0.3
SEMA4D-223ENST00000540475 KSR2Q6VAB6 950 aa16.9■□□□□ 0.3
SEMA4D-223ENST00000540475 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
SEMA4D-223ENST00000540475 MYD88Q99836 296 aa16.9■□□□□ 0.3
SEMA4D-223ENST00000540475 CXCL9Q07325 125 aa16.89■□□□□ 0.29
SEMA4D-223ENST00000540475 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
SEMA4D-223ENST00000540475 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
SEMA4D-223ENST00000540475 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
SEMA4D-223ENST00000540475 RPS8P62241 208 aaKnown RBP16.88■□□□□ 0.29
SEMA4D-223ENST00000540475 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
SEMA4D-223ENST00000540475 ZNF428Q96B54 188 aa16.88■□□□□ 0.29
SEMA4D-223ENST00000540475 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
SEMA4D-223ENST00000540475 TRPM7Q96QT4 1865 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 PDE8AO60658 829 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 IGKV5-2P06315 115 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 EPS15P42566 896 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 EAPPQ56P03 285 aaPredicted RBP16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 CNTROBQ8N137 903 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 GPRC5DQ9NZD1 345 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 MAP3K2Q9Y2U5 619 aa16.87■□□□□ 0.29
SEMA4D-223ENST00000540475 LMOD1P29536 600 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-223ENST00000540475 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
SEMA4D-223ENST00000540475 STK31Q9BXU1 1019 aa16.86■□□□□ 0.29
SEMA4D-223ENST00000540475 POLLQ9UGP5 575 aa16.86■□□□□ 0.29
SEMA4D-223ENST00000540475 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
SEMA4D-223ENST00000540475 TMEM88BA6NKF7 163 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 YDJCA8MPS7 323 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 VAMP4O75379 141 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 GPSM2P81274 684 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 G2E3Q7L622 706 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 PGAP2Q9UHJ9 254 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 CLEC11AQ9Y240 323 aa16.85■□□□□ 0.29
SEMA4D-223ENST00000540475 PSME4Q14997 1843 aa16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 TNIP1Q15025 636 aa16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 WASHC4Q2M389 1173 aa16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 CCDC152Q4G0S7 254 aa16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 CIAPIN1Q6FI81 312 aa16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 SEC31BQ9NQW1 1179 aa16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 ADARB2Q9NS39 739 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 CNTNAP1P78357 1384 aa16.84■□□□□ 0.29
SEMA4D-223ENST00000540475 SCN9AQ15858 1988 aa16.83■□□□□ 0.28
SEMA4D-223ENST00000540475 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
SEMA4D-223ENST00000540475 TBC1D16Q8TBP0 767 aa16.83■□□□□ 0.28
SEMA4D-223ENST00000540475 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
SEMA4D-223ENST00000540475 H7C1W4 665 aa16.82■□□□□ 0.28
SEMA4D-223ENST00000540475 GMPSP49915 693 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-223ENST00000540475 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
SEMA4D-223ENST00000540475 DPF2Q92785 391 aa16.82■□□□□ 0.28
SEMA4D-223ENST00000540475 FLIIQ13045 1269 aa16.81■□□□□ 0.28
SEMA4D-223ENST00000540475 TTLL11Q8NHH1 800 aa16.81■□□□□ 0.28
SEMA4D-223ENST00000540475 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
SEMA4D-223ENST00000540475 JARID2Q92833 1246 aaPredicted RBP16.81■□□□□ 0.28
SEMA4D-223ENST00000540475 EYA3Q99504 573 aa16.81■□□□□ 0.28
SEMA4D-223ENST00000540475 PLA2G12BQ9BX93 195 aa16.81■□□□□ 0.28
SEMA4D-223ENST00000540475 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
SEMA4D-223ENST00000540475 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 RASSF10A6NK89 507 aa16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 RAD17O75943 681 aa16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 CASP7P55210 303 aa16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 CTSWP56202 376 aa16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 CWF19L2Q2TBE0 894 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 MKRN1Q9UHC7 482 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-223ENST00000540475 SPEF2Q9C093 1822 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms