RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 LARGE2Q8N3Y3 721 aa11.61□□□□□ -0.55
LMO3-222ENST00000540445 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
LMO3-222ENST00000540445 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
LMO3-222ENST00000540445 PASKQ96RG2 1323 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 SP8Q8IXZ3 490 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 GPC2Q8N158 579 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 MYD88Q99836 296 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 STK31Q9BXU1 1019 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 RTFDC1Q9BY42 306 aaPredicted RBP11.6□□□□□ -0.55
LMO3-222ENST00000540445 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
LMO3-222ENST00000540445 IRS4O14654 1257 aaPredicted RBP11.59□□□□□ -0.55
LMO3-222ENST00000540445 PPIP5K2O43314 1243 aa11.59□□□□□ -0.55
LMO3-222ENST00000540445 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
LMO3-222ENST00000540445 EPHX2P34913 555 aa11.59□□□□□ -0.55
LMO3-222ENST00000540445 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
LMO3-222ENST00000540445 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
LMO3-222ENST00000540445 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
LMO3-222ENST00000540445 NIM1KQ8IY84 436 aa11.59□□□□□ -0.55
LMO3-222ENST00000540445 MPNDQ8N594 471 aa11.59□□□□□ -0.55
LMO3-222ENST00000540445 SUPT20HQ8NEM7 779 aa11.59□□□□□ -0.55
LMO3-222ENST00000540445 VPS33BQ9H267 617 aa11.59□□□□□ -0.55
LMO3-222ENST00000540445 PSME4Q14997 1843 aa11.58□□□□□ -0.56
LMO3-222ENST00000540445 HSP90B1P14625 803 aaKnown RBP11.58□□□□□ -0.56
LMO3-222ENST00000540445 GRAPQ13588 217 aa11.58□□□□□ -0.56
LMO3-222ENST00000540445 DPP8Q6V1X1 898 aaPredicted RBP11.58□□□□□ -0.56
LMO3-222ENST00000540445 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
LMO3-222ENST00000540445 GRAPLQ8TC17 118 aaPredicted RBP11.58□□□□□ -0.56
LMO3-222ENST00000540445 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
LMO3-222ENST00000540445 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
LMO3-222ENST00000540445 IL16Q14005 1332 aa11.58□□□□□ -0.56
LMO3-222ENST00000540445 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
LMO3-222ENST00000540445 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 SCNN1DP51172 638 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 SF3B3Q15393 1217 aaKnown RBP11.57□□□□□ -0.56
LMO3-222ENST00000540445 AOC3Q16853 763 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
LMO3-222ENST00000540445 KSR2Q6VAB6 950 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 TMC4Q7Z404 712 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 CCDC191Q8NCU4 936 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 JARID2Q92833 1246 aaPredicted RBP11.57□□□□□ -0.56
LMO3-222ENST00000540445 METTL22Q9BUU2 404 aaPredicted RBP11.57□□□□□ -0.56
LMO3-222ENST00000540445 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
LMO3-222ENST00000540445 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
LMO3-222ENST00000540445 SPEF2Q9C093 1822 aa11.56□□□□□ -0.56
LMO3-222ENST00000540445 PI4KAP2A4QPH2 592 aa11.56□□□□□ -0.56
LMO3-222ENST00000540445 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
LMO3-222ENST00000540445 NEXNQ0ZGT2 675 aa11.56□□□□□ -0.56
LMO3-222ENST00000540445 PNMA8AQ86V59 439 aaPredicted RBP11.56□□□□□ -0.56
LMO3-222ENST00000540445 PI4KAP1Q8N8J0 262 aa11.56□□□□□ -0.56
LMO3-222ENST00000540445 CELF1Q92879 486 aaKnown RBP11.56□□□□□ -0.56
LMO3-222ENST00000540445 NSFL1CQ9UNZ2 370 aaKnown RBP11.56□□□□□ -0.56
LMO3-222ENST00000540445 CNTNAP1P78357 1384 aa11.55□□□□□ -0.56
LMO3-222ENST00000540445 EPS15P42566 896 aa11.55□□□□□ -0.56
LMO3-222ENST00000540445 RPS8P62241 208 aaKnown RBP11.55□□□□□ -0.56
LMO3-222ENST00000540445 CXCL9Q07325 125 aa11.55□□□□□ -0.56
LMO3-222ENST00000540445 KIAA2012Q0VF49 1180 aa11.55□□□□□ -0.56
LMO3-222ENST00000540445 ZNRF3Q9ULT6 936 aa11.55□□□□□ -0.56
LMO3-222ENST00000540445 C6orf229H3BNL8 230 aa11.54□□□□□ -0.56
LMO3-222ENST00000540445 PDE8AO60658 829 aa11.54□□□□□ -0.56
LMO3-222ENST00000540445 PCCAP05165 728 aaPredicted RBP11.54□□□□□ -0.56
LMO3-222ENST00000540445 EXOSC9Q06265 439 aaKnown RBP11.54□□□□□ -0.56
LMO3-222ENST00000540445 CCDC152Q4G0S7 254 aa11.54□□□□□ -0.56
LMO3-222ENST00000540445 MAP1SQ66K74 1059 aaPredicted RBP11.54□□□□□ -0.56
LMO3-222ENST00000540445 G2E3Q7L622 706 aa11.54□□□□□ -0.56
LMO3-222ENST00000540445 CNTROBQ8N137 903 aa11.54□□□□□ -0.56
LMO3-222ENST00000540445 CCDC85AQ96PX6 553 aaPredicted RBP11.54□□□□□ -0.56
LMO3-222ENST00000540445 FANCIQ9NVI1 1328 aa11.54□□□□□ -0.56
LMO3-222ENST00000540445 THSD7BQ9C0I4 1608 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 YDJCA8MPS7 323 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 VAMP4O75379 141 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 HSPA1AP0DMV8 641 aaKnown RBP11.53□□□□□ -0.56
LMO3-222ENST00000540445 HSPA1BP0DMV9 641 aaKnown RBP11.53□□□□□ -0.56
LMO3-222ENST00000540445 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 USP50Q70EL3 339 aaPredicted RBP11.53□□□□□ -0.56
LMO3-222ENST00000540445 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 GPRC5DQ9NZD1 345 aa11.53□□□□□ -0.56
LMO3-222ENST00000540445 MKRN1Q9UHC7 482 aaKnown RBP11.53□□□□□ -0.56
LMO3-222ENST00000540445 ZNF646O15015 1829 aaPredicted RBP11.53□□□□□ -0.56
LMO3-222ENST00000540445 G3V3G9 751 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 RAD17O75943 681 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
LMO3-222ENST00000540445 TNIP1Q15025 636 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 CWF19L2Q2TBE0 894 aaKnown RBP11.52□□□□□ -0.57
LMO3-222ENST00000540445 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 COL13A1Q5TAT6 717 aaPredicted RBP11.52□□□□□ -0.57
LMO3-222ENST00000540445 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 ANKIB1Q9P2G1 1089 aa11.52□□□□□ -0.57
LMO3-222ENST00000540445 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
LMO3-222ENST00000540445 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
LMO3-222ENST00000540445 GPSM2P81274 684 aa11.51□□□□□ -0.57
LMO3-222ENST00000540445 FLIIQ13045 1269 aa11.51□□□□□ -0.57
LMO3-222ENST00000540445 ANKRD18AQ8IVF6 992 aa11.51□□□□□ -0.57
LMO3-222ENST00000540445 EYA3Q99504 573 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms