RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 C1QTNF8P60827 252 aa19.24■□□□□ 0.67
UBE3B-212ENST00000540230 CC2D2BQ6DHV5 1058 aa19.24■□□□□ 0.67
UBE3B-212ENST00000540230 PSMD1Q99460 953 aa19.24■□□□□ 0.67
UBE3B-212ENST00000540230 CDHR2Q9BYE9 1310 aa19.24■□□□□ 0.67
UBE3B-212ENST00000540230 GLTPD2A6NH11 291 aa19.23■□□□□ 0.67
UBE3B-212ENST00000540230 PDE8AO60658 829 aa19.23■□□□□ 0.67
UBE3B-212ENST00000540230 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
UBE3B-212ENST00000540230 MRPL50Q8N5N7 158 aaKnown RBP19.23■□□□□ 0.67
UBE3B-212ENST00000540230 CCDC85AQ96PX6 553 aaPredicted RBP19.23■□□□□ 0.67
UBE3B-212ENST00000540230 SEC31BQ9NQW1 1179 aa19.23■□□□□ 0.67
UBE3B-212ENST00000540230 MYH3P11055 1940 aa19.23■□□□□ 0.67
UBE3B-212ENST00000540230 BBOX1O75936 387 aa19.22■□□□□ 0.67
UBE3B-212ENST00000540230 GCKRQ14397 625 aa19.22■□□□□ 0.67
UBE3B-212ENST00000540230 LINS1Q8NG48 757 aa19.22■□□□□ 0.67
UBE3B-212ENST00000540230 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
UBE3B-212ENST00000540230 BCL2L13Q9BXK5 485 aa19.22■□□□□ 0.67
UBE3B-212ENST00000540230 KDM2BQ8NHM5 1336 aa19.22■□□□□ 0.67
UBE3B-212ENST00000540230 DUOX1Q9NRD9 1551 aa19.21■□□□□ 0.67
UBE3B-212ENST00000540230 H7C1W4 665 aa19.21■□□□□ 0.67
UBE3B-212ENST00000540230 BEND3Q5T5X7 828 aa19.21■□□□□ 0.67
UBE3B-212ENST00000540230 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
UBE3B-212ENST00000540230 SP8Q8IXZ3 490 aa19.21■□□□□ 0.67
UBE3B-212ENST00000540230 RRAGCQ9HB90 399 aa19.21■□□□□ 0.67
UBE3B-212ENST00000540230 CASP7P55210 303 aa19.2■□□□□ 0.66
UBE3B-212ENST00000540230 CTSWP56202 376 aa19.2■□□□□ 0.66
UBE3B-212ENST00000540230 ZNF541Q9H0D2 1346 aa19.2■□□□□ 0.66
UBE3B-212ENST00000540230 WDR90Q96KV7 1748 aa19.19■□□□□ 0.66
UBE3B-212ENST00000540230 DDNO94850 711 aaPredicted RBP19.19■□□□□ 0.66
UBE3B-212ENST00000540230 LTBP1Q14766 1721 aa19.19■□□□□ 0.66
UBE3B-212ENST00000540230 POTECB2RU33 542 aa19.18■□□□□ 0.66
UBE3B-212ENST00000540230 HNRNPUQ00839 825 aaKnown RBP eCLIP19.18■□□□□ 0.66
UBE3B-212ENST00000540230 CCDC152Q4G0S7 254 aa19.18■□□□□ 0.66
UBE3B-212ENST00000540230 GRIPAP1Q4V328 841 aa19.18■□□□□ 0.66
UBE3B-212ENST00000540230 TTLL11Q8NHH1 800 aa19.18■□□□□ 0.66
UBE3B-212ENST00000540230 SPEF2Q9C093 1822 aa19.18■□□□□ 0.66
UBE3B-212ENST00000540230 HSP90B1P14625 803 aaKnown RBP19.17■□□□□ 0.66
UBE3B-212ENST00000540230 RPS8P62241 208 aaKnown RBP19.17■□□□□ 0.66
UBE3B-212ENST00000540230 AOC3Q16853 763 aa19.17■□□□□ 0.66
UBE3B-212ENST00000540230 SLC4A10Q6U841 1118 aa19.17■□□□□ 0.66
UBE3B-212ENST00000540230 DPP8Q6V1X1 898 aaPredicted RBP19.17■□□□□ 0.66
UBE3B-212ENST00000540230 MPNDQ8N594 471 aa19.17■□□□□ 0.66
UBE3B-212ENST00000540230 RTFDC1Q9BY42 306 aaPredicted RBP19.17■□□□□ 0.66
UBE3B-212ENST00000540230 FZD9O00144 591 aa19.16■□□□□ 0.66
UBE3B-212ENST00000540230 DPY19L2Q6NUT2 758 aa19.16■□□□□ 0.66
UBE3B-212ENST00000540230 TMX4Q9H1E5 349 aaPredicted RBP19.16■□□□□ 0.66
UBE3B-212ENST00000540230 GREM2Q9H772 168 aa19.16■□□□□ 0.66
UBE3B-212ENST00000540230 PPIP5K2O43314 1243 aa19.15■□□□□ 0.66
UBE3B-212ENST00000540230 TMC4Q7Z404 712 aa19.15■□□□□ 0.66
UBE3B-212ENST00000540230 LARGE2Q8N3Y3 721 aa19.15■□□□□ 0.66
UBE3B-212ENST00000540230 GPSM2P81274 684 aa19.15■□□□□ 0.66
UBE3B-212ENST00000540230 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
UBE3B-212ENST00000540230 PLA2G12BQ9BX93 195 aa19.15■□□□□ 0.66
UBE3B-212ENST00000540230 SMC4Q9NTJ3 1288 aa19.15■□□□□ 0.66
UBE3B-212ENST00000540230 TOMM70O94826 608 aa19.14■□□□□ 0.65
UBE3B-212ENST00000540230 JDP2Q8WYK2 163 aa19.14■□□□□ 0.65
UBE3B-212ENST00000540230 NSFL1CQ9UNZ2 370 aaKnown RBP19.14■□□□□ 0.65
UBE3B-212ENST00000540230 PTPRCP08575 1304 aa19.13■□□□□ 0.65
UBE3B-212ENST00000540230 VEGFAP15692 232 aaPredicted RBP19.13■□□□□ 0.65
UBE3B-212ENST00000540230 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
UBE3B-212ENST00000540230 GPR101Q96P66 508 aaPredicted RBP19.13■□□□□ 0.65
UBE3B-212ENST00000540230 POLLQ9UGP5 575 aa19.13■□□□□ 0.65
UBE3B-212ENST00000540230 RTL9Q8NET4 1388 aa19.13■□□□□ 0.65
UBE3B-212ENST00000540230 GRM8O00222 908 aa19.12■□□□□ 0.65
UBE3B-212ENST00000540230 SUPT20HQ8NEM7 779 aa19.12■□□□□ 0.65
UBE3B-212ENST00000540230 SRCIN1Q9C0H9 1055 aa19.12■□□□□ 0.65
UBE3B-212ENST00000540230 ALDH1L1O75891 902 aa19.11■□□□□ 0.65
UBE3B-212ENST00000540230 CSF1RP07333 972 aa19.11■□□□□ 0.65
UBE3B-212ENST00000540230 CT47B1P0C2W7 299 aaPredicted RBP19.11■□□□□ 0.65
UBE3B-212ENST00000540230 FOXO4P98177 505 aa19.11■□□□□ 0.65
UBE3B-212ENST00000540230 KIAA2012Q0VF49 1180 aa19.11■□□□□ 0.65
UBE3B-212ENST00000540230 EPHA10Q5JZY3 1008 aa19.11■□□□□ 0.65
UBE3B-212ENST00000540230 ANKRD18AQ8IVF6 992 aa19.11■□□□□ 0.65
UBE3B-212ENST00000540230 NIM1KQ8IY84 436 aa19.1■□□□□ 0.65
UBE3B-212ENST00000540230 C16orf71Q8IYS4 520 aaPredicted RBP19.1■□□□□ 0.65
UBE3B-212ENST00000540230 L3MBTL3Q96JM7 780 aaPredicted RBP19.1■□□□□ 0.65
UBE3B-212ENST00000540230 CEP350Q5VT06 3117 aa19.1■□□□□ 0.65
UBE3B-212ENST00000540230 ITGA6P23229 1130 aa19.1■□□□□ 0.65
UBE3B-212ENST00000540230 RARSP54136 660 aaKnown RBP19.1■□□□□ 0.65
UBE3B-212ENST00000540230 TBC1D16Q8TBP0 767 aa19.1■□□□□ 0.65
UBE3B-212ENST00000540230 RBM46Q8TBY0 533 aaKnown RBP19.1■□□□□ 0.65
UBE3B-212ENST00000540230 CDC5LQ99459 802 aaKnown RBP19.1■□□□□ 0.65
UBE3B-212ENST00000540230 VPS33BQ9H267 617 aa19.1■□□□□ 0.65
UBE3B-212ENST00000540230 SCN4AP35499 1836 aa19.09■□□□□ 0.65
UBE3B-212ENST00000540230 WTIPA6NIX2 430 aaPredicted RBP19.09■□□□□ 0.65
UBE3B-212ENST00000540230 NBPF7P0C2Y1 421 aaPredicted RBP19.09■□□□□ 0.65
UBE3B-212ENST00000540230 POTEIP0CG38 1075 aa19.09■□□□□ 0.65
UBE3B-212ENST00000540230 POTEJP0CG39 1038 aa19.09■□□□□ 0.65
UBE3B-212ENST00000540230 EIF6P56537 245 aaKnown RBP19.09■□□□□ 0.65
UBE3B-212ENST00000540230 PODXL2Q9NZ53 605 aa19.09■□□□□ 0.65
UBE3B-212ENST00000540230 C9orf78Q9NZ63 289 aaPredicted RBP19.09■□□□□ 0.65
UBE3B-212ENST00000540230 GJA3Q9Y6H8 435 aa19.09■□□□□ 0.65
UBE3B-212ENST00000540230 YDJCA8MPS7 323 aa19.08■□□□□ 0.64
UBE3B-212ENST00000540230 C6orf229H3BNL8 230 aa19.08■□□□□ 0.64
UBE3B-212ENST00000540230 RIMBP2O15034 1052 aa19.08■□□□□ 0.64
UBE3B-212ENST00000540230 GPC2Q8N158 579 aa19.08■□□□□ 0.64
UBE3B-212ENST00000540230 KAZALD1Q96I82 304 aa19.08■□□□□ 0.64
UBE3B-212ENST00000540230 SUCLG2Q96I99 432 aa19.08■□□□□ 0.64
UBE3B-212ENST00000540230 NOB1Q9ULX3 412 aaKnown RBP19.08■□□□□ 0.64
UBE3B-212ENST00000540230 WASHC4Q2M389 1173 aa19.07■□□□□ 0.64
UBE3B-212ENST00000540230 BSDC1Q9NW68 430 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 396.7 ms