RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
PXN-209ENST00000540221 RTL5Q5HYW3 569 aaPredicted RBP11.48□□□□□ -0.57
PXN-209ENST00000540221 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 SP8Q8IXZ3 490 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 SUPT20HQ8NEM7 779 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 CDC5LQ99459 802 aaKnown RBP11.48□□□□□ -0.57
PXN-209ENST00000540221 C9orf78Q9NZ63 289 aaPredicted RBP11.48□□□□□ -0.57
PXN-209ENST00000540221 RNF181Q9P0P0 153 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 ABCC4O15439 1325 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 COL11A2P13942 1736 aaPredicted RBP11.47□□□□□ -0.57
PXN-209ENST00000540221 GRM8O00222 908 aa11.47□□□□□ -0.57
PXN-209ENST00000540221 RPS8P62241 208 aaKnown RBP11.47□□□□□ -0.57
PXN-209ENST00000540221 C9orf131Q5VYM1 1079 aa11.47□□□□□ -0.57
PXN-209ENST00000540221 BCL2L13Q9BXK5 485 aa11.47□□□□□ -0.57
PXN-209ENST00000540221 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
PXN-209ENST00000540221 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.57
PXN-209ENST00000540221 TTLL11Q8NHH1 800 aa11.46□□□□□ -0.57
PXN-209ENST00000540221 NOB1Q9ULX3 412 aaKnown RBP11.46□□□□□ -0.57
PXN-209ENST00000540221 UTYO14607 1347 aa11.45□□□□□ -0.58
PXN-209ENST00000540221 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
PXN-209ENST00000540221 CSF1RP07333 972 aa11.45□□□□□ -0.58
PXN-209ENST00000540221 CASP7P55210 303 aa11.45□□□□□ -0.58
PXN-209ENST00000540221 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
PXN-209ENST00000540221 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
PXN-209ENST00000540221 MPNDQ8N594 471 aa11.45□□□□□ -0.58
PXN-209ENST00000540221 ZNF784Q8NCA9 323 aaPredicted RBP11.45□□□□□ -0.58
PXN-209ENST00000540221 RASSF7Q02833 373 aa11.44□□□□□ -0.58
PXN-209ENST00000540221 DPP8Q6V1X1 898 aaPredicted RBP11.44□□□□□ -0.58
PXN-209ENST00000540221 JDP2Q8WYK2 163 aa11.44□□□□□ -0.58
PXN-209ENST00000540221 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
PXN-209ENST00000540221 CHD4Q14839 1912 aa11.44□□□□□ -0.58
PXN-209ENST00000540221 MS4A1P11836 297 aa11.43□□□□□ -0.58
PXN-209ENST00000540221 IGHMBP2P38935 993 aaKnown RBP11.43□□□□□ -0.58
PXN-209ENST00000540221 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
PXN-209ENST00000540221 ZKSCAN2Q63HK3 967 aa11.43□□□□□ -0.58
PXN-209ENST00000540221 ATF7IPQ6VMQ6 1270 aa11.43□□□□□ -0.58
PXN-209ENST00000540221 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
PXN-209ENST00000540221 CELF1Q92879 486 aaKnown RBP11.43□□□□□ -0.58
PXN-209ENST00000540221 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
PXN-209ENST00000540221 BSDC1Q9NW68 430 aaPredicted RBP11.43□□□□□ -0.58
PXN-209ENST00000540221 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
PXN-209ENST00000540221 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 LAMB2P55268 1798 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 ANKRD18BA2A2Z9 1011 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
PXN-209ENST00000540221 CCDC57Q2TAC2 916 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
PXN-209ENST00000540221 EYA3Q99504 573 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 MPHOSPH8Q99549 860 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 SEC31BQ9NQW1 1179 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
PXN-209ENST00000540221 DDX60Q8IY21 1712 aaKnown RBP11.41□□□□□ -0.58
PXN-209ENST00000540221 GLTPD2A6NH11 291 aa11.41□□□□□ -0.58
PXN-209ENST00000540221 BCAR3O75815 825 aa11.41□□□□□ -0.58
PXN-209ENST00000540221 GNAI3P08754 354 aa11.41□□□□□ -0.58
PXN-209ENST00000540221 ITGA6P23229 1130 aa11.41□□□□□ -0.58
PXN-209ENST00000540221 FOXO4P98177 505 aa11.41□□□□□ -0.58
PXN-209ENST00000540221 FRAT1Q92837 279 aaPredicted RBP11.41□□□□□ -0.58
PXN-209ENST00000540221 USP44Q9H0E7 712 aa11.41□□□□□ -0.58
PXN-209ENST00000540221 GREM2Q9H772 168 aa11.41□□□□□ -0.58
PXN-209ENST00000540221 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
PXN-209ENST00000540221 NSFL1CQ9UNZ2 370 aaKnown RBP11.41□□□□□ -0.58
PXN-209ENST00000540221 XDHP47989 1333 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 NBPF7P0C2Y1 421 aaPredicted RBP11.4□□□□□ -0.58
PXN-209ENST00000540221 UBTFL1P0CB47 393 aaPredicted RBP11.4□□□□□ -0.58
PXN-209ENST00000540221 TRIM27P14373 513 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 KIAA2012Q0VF49 1180 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
PXN-209ENST00000540221 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 OLFM4Q6UX06 510 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
PXN-209ENST00000540221 ANKRD2Q9GZV1 360 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 ANKIB1Q9P2G1 1089 aa11.4□□□□□ -0.58
PXN-209ENST00000540221 FZD9O00144 591 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 ATP2B4P23634 1241 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 PRELPP51888 382 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
PXN-209ENST00000540221 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
PXN-209ENST00000540221 NIM1KQ8IY84 436 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 GGA1Q9UJY5 639 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 CHMP3Q9Y3E7 222 aa11.39□□□□□ -0.59
PXN-209ENST00000540221 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
PXN-209ENST00000540221 GPSM2P81274 684 aa11.38□□□□□ -0.59
PXN-209ENST00000540221 DZIP1LQ8IYY4 767 aaKnown RBP11.38□□□□□ -0.59
PXN-209ENST00000540221 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
PXN-209ENST00000540221 SUCLG2Q96I99 432 aa11.38□□□□□ -0.59
PXN-209ENST00000540221 ZC3H12CQ9C0D7 883 aaKnown RBP11.38□□□□□ -0.59
PXN-209ENST00000540221 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
PXN-209ENST00000540221 MINPP1Q9UNW1 487 aa11.38□□□□□ -0.59
PXN-209ENST00000540221 LEMD3Q9Y2U8 911 aa11.38□□□□□ -0.59
PXN-209ENST00000540221 IQCA1LA6NCM1 817 aa11.37□□□□□ -0.59
PXN-209ENST00000540221 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms