RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 PRELPP51888 382 aa17.03■□□□□ 0.32
CCDC130-202ENST00000540216 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
CCDC130-202ENST00000540216 SSH1Q8WYL5 1049 aa17.03■□□□□ 0.32
CCDC130-202ENST00000540216 CCDC88AQ3V6T2 1871 aa17.03■□□□□ 0.32
CCDC130-202ENST00000540216 F6X3S4 739 aa17.02■□□□□ 0.32
CCDC130-202ENST00000540216 H7C1W4 665 aa17.02■□□□□ 0.32
CCDC130-202ENST00000540216 CCDC152Q4G0S7 254 aa17.02■□□□□ 0.32
CCDC130-202ENST00000540216 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
CCDC130-202ENST00000540216 KDM2BQ8NHM5 1336 aa17.01■□□□□ 0.31
CCDC130-202ENST00000540216 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
CCDC130-202ENST00000540216 UBE3BQ7Z3V4 1068 aa17.01■□□□□ 0.31
CCDC130-202ENST00000540216 SP8Q8IXZ3 490 aa17.01■□□□□ 0.31
CCDC130-202ENST00000540216 SMC4Q9NTJ3 1288 aa17.01■□□□□ 0.31
CCDC130-202ENST00000540216 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
CCDC130-202ENST00000540216 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
CCDC130-202ENST00000540216 MYH3P11055 1940 aa17■□□□□ 0.31
CCDC130-202ENST00000540216 ALDH1L1O75891 902 aa17■□□□□ 0.31
CCDC130-202ENST00000540216 BRPF1P55201 1214 aaPredicted RBP17■□□□□ 0.31
CCDC130-202ENST00000540216 CTSWP56202 376 aa17■□□□□ 0.31
CCDC130-202ENST00000540216 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
CCDC130-202ENST00000540216 PLA2G12BQ9BX93 195 aa17■□□□□ 0.31
CCDC130-202ENST00000540216 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
CCDC130-202ENST00000540216 SUPT20HQ8NEM7 779 aa16.99■□□□□ 0.31
CCDC130-202ENST00000540216 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
CCDC130-202ENST00000540216 RTL9Q8NET4 1388 aa16.99■□□□□ 0.31
CCDC130-202ENST00000540216 CASP7P55210 303 aa16.98■□□□□ 0.31
CCDC130-202ENST00000540216 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
CCDC130-202ENST00000540216 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
CCDC130-202ENST00000540216 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
CCDC130-202ENST00000540216 SRCIN1Q9C0H9 1055 aa16.98■□□□□ 0.31
CCDC130-202ENST00000540216 VPS33BQ9H267 617 aa16.98■□□□□ 0.31
CCDC130-202ENST00000540216 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
CCDC130-202ENST00000540216 TAF1P21675 1872 aa16.97■□□□□ 0.31
CCDC130-202ENST00000540216 GLTPD2A6NH11 291 aa16.97■□□□□ 0.31
CCDC130-202ENST00000540216 RPS8P62241 208 aaKnown RBP16.97■□□□□ 0.31
CCDC130-202ENST00000540216 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
CCDC130-202ENST00000540216 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
CCDC130-202ENST00000540216 MPNDQ8N594 471 aa16.97■□□□□ 0.31
CCDC130-202ENST00000540216 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
CCDC130-202ENST00000540216 CDC5LQ99459 802 aaKnown RBP16.97■□□□□ 0.31
CCDC130-202ENST00000540216 GRM8O00222 908 aa16.96■□□□□ 0.31
CCDC130-202ENST00000540216 DPP8Q6V1X1 898 aaPredicted RBP16.96■□□□□ 0.31
CCDC130-202ENST00000540216 KIF16BQ96L93 1317 aa16.96■□□□□ 0.3
CCDC130-202ENST00000540216 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
CCDC130-202ENST00000540216 ANKRD18AQ8IVF6 992 aa16.95■□□□□ 0.3
CCDC130-202ENST00000540216 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
CCDC130-202ENST00000540216 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
CCDC130-202ENST00000540216 C9orf78Q9NZ63 289 aaPredicted RBP16.95■□□□□ 0.3
CCDC130-202ENST00000540216 COL4A1P02462 1669 aa16.94■□□□□ 0.3
CCDC130-202ENST00000540216 SLC51AQ86UW1 340 aa16.94■□□□□ 0.3
CCDC130-202ENST00000540216 KIF3CO14782 793 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 CSF1RP07333 972 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 CCDC85AQ96PX6 553 aaPredicted RBP16.93■□□□□ 0.3
CCDC130-202ENST00000540216 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
CCDC130-202ENST00000540216 GREM2Q9H772 168 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 UTYO14607 1347 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 WDR90Q96KV7 1748 aa16.93■□□□□ 0.3
CCDC130-202ENST00000540216 FZD9O00144 591 aa16.92■□□□□ 0.3
CCDC130-202ENST00000540216 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
CCDC130-202ENST00000540216 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
CCDC130-202ENST00000540216 ARHGAP45Q92619 1136 aa16.92■□□□□ 0.3
CCDC130-202ENST00000540216 LTBP1Q14766 1721 aa16.92■□□□□ 0.3
CCDC130-202ENST00000540216 CCT4P50991 539 aaKnown RBP16.91■□□□□ 0.3
CCDC130-202ENST00000540216 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
CCDC130-202ENST00000540216 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
CCDC130-202ENST00000540216 BSDC1Q9NW68 430 aaPredicted RBP16.91■□□□□ 0.3
CCDC130-202ENST00000540216 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
CCDC130-202ENST00000540216 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
CCDC130-202ENST00000540216 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
CCDC130-202ENST00000540216 VEGFAP15692 232 aaPredicted RBP16.9■□□□□ 0.3
CCDC130-202ENST00000540216 ITGA6P23229 1130 aa16.9■□□□□ 0.3
CCDC130-202ENST00000540216 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
CCDC130-202ENST00000540216 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
CCDC130-202ENST00000540216 GPSM2P81274 684 aa16.9■□□□□ 0.3
CCDC130-202ENST00000540216 FOXO4P98177 505 aa16.9■□□□□ 0.3
CCDC130-202ENST00000540216 AOC3Q16853 763 aa16.9■□□□□ 0.3
CCDC130-202ENST00000540216 COL4A5P29400 1685 aa16.9■□□□□ 0.3
CCDC130-202ENST00000540216 ANKRD18BA2A2Z9 1011 aa16.89■□□□□ 0.29
CCDC130-202ENST00000540216 IPO8O15397 1037 aaKnown RBP16.89■□□□□ 0.29
CCDC130-202ENST00000540216 C1QTNF8P60827 252 aa16.89■□□□□ 0.29
CCDC130-202ENST00000540216 C16orf71Q8IYS4 520 aaPredicted RBP16.89■□□□□ 0.29
CCDC130-202ENST00000540216 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
CCDC130-202ENST00000540216 EYA3Q99504 573 aa16.89■□□□□ 0.29
CCDC130-202ENST00000540216 ANKIB1Q9P2G1 1089 aa16.89■□□□□ 0.29
CCDC130-202ENST00000540216 XDHP47989 1333 aa16.89■□□□□ 0.29
CCDC130-202ENST00000540216 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
CCDC130-202ENST00000540216 C6orf229H3BNL8 230 aa16.88■□□□□ 0.29
CCDC130-202ENST00000540216 TOMM70O94826 608 aa16.88■□□□□ 0.29
CCDC130-202ENST00000540216 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
CCDC130-202ENST00000540216 NBPF7P0C2Y1 421 aaPredicted RBP16.88■□□□□ 0.29
CCDC130-202ENST00000540216 IFIT5Q13325 482 aaKnown RBP16.88■□□□□ 0.29
CCDC130-202ENST00000540216 GPC2Q8N158 579 aa16.88■□□□□ 0.29
CCDC130-202ENST00000540216 TBC1D16Q8TBP0 767 aa16.88■□□□□ 0.29
CCDC130-202ENST00000540216 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
CCDC130-202ENST00000540216 GGA1Q9UJY5 639 aa16.88■□□□□ 0.29
CCDC130-202ENST00000540216 SPEF2Q9C093 1822 aa16.87■□□□□ 0.29
CCDC130-202ENST00000540216 IQCA1LA6NCM1 817 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms