RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 DDX46Q7L014 1031 aaKnown RBP26.2■■□□□ 1.78
LPCAT3-210ENST00000540090 XAGE3Q8WTP9 111 aa26.2■■□□□ 1.78
LPCAT3-210ENST00000540090 ZC3H15Q8WU90 426 aaKnown RBP26.2■■□□□ 1.78
LPCAT3-210ENST00000540090 CDHR2Q9BYE9 1310 aa26.19■■□□□ 1.78
LPCAT3-210ENST00000540090 CELF2O95319 508 aaKnown RBP26.19■■□□□ 1.78
LPCAT3-210ENST00000540090 AIMP1Q12904 312 aaKnown RBP26.19■■□□□ 1.78
LPCAT3-210ENST00000540090 TNIP1Q15025 636 aa26.19■■□□□ 1.78
LPCAT3-210ENST00000540090 HHIPL1Q96JK4 782 aa26.19■■□□□ 1.78
LPCAT3-210ENST00000540090 GLIS2Q9BZE0 524 aaPredicted RBP26.19■■□□□ 1.78
LPCAT3-210ENST00000540090 THSD7BQ9C0I4 1608 aa26.18■■□□□ 1.78
LPCAT3-210ENST00000540090 AOC2O75106 756 aa26.18■■□□□ 1.78
LPCAT3-210ENST00000540090 HIRAP54198 1017 aaPredicted RBP26.18■■□□□ 1.78
LPCAT3-210ENST00000540090 GRAPQ13588 217 aa26.18■■□□□ 1.78
LPCAT3-210ENST00000540090 GRAPLQ8TC17 118 aaPredicted RBP26.18■■□□□ 1.78
LPCAT3-210ENST00000540090 BCL2L13Q9BXK5 485 aa26.18■■□□□ 1.78
LPCAT3-210ENST00000540090 TRMT112Q9UI30 125 aaKnown RBP26.18■■□□□ 1.78
LPCAT3-210ENST00000540090 SH3TC1Q8TE82 1336 aa26.17■■□□□ 1.78
LPCAT3-210ENST00000540090 RAD17O75943 681 aa26.17■■□□□ 1.78
LPCAT3-210ENST00000540090 TMPOP42166 694 aaKnown RBP26.17■■□□□ 1.78
LPCAT3-210ENST00000540090 NECTIN2Q92692 538 aa26.17■■□□□ 1.78
LPCAT3-210ENST00000540090 LMOD3Q0VAK6 560 aa26.16■■□□□ 1.78
LPCAT3-210ENST00000540090 TRPM7Q96QT4 1865 aa26.15■■□□□ 1.78
LPCAT3-210ENST00000540090 TMC4Q7Z404 712 aa26.15■■□□□ 1.78
LPCAT3-210ENST00000540090 CNOT7Q9UIV1 285 aaKnown RBP26.15■■□□□ 1.78
LPCAT3-210ENST00000540090 YDJCA8MPS7 323 aa26.14■■□□□ 1.78
LPCAT3-210ENST00000540090 CDC37L1Q7L3B6 337 aa26.14■■□□□ 1.78
LPCAT3-210ENST00000540090 TRPM4Q8TD43 1214 aa26.14■■□□□ 1.78
LPCAT3-210ENST00000540090 CA12O43570 354 aa26.13■■□□□ 1.77
LPCAT3-210ENST00000540090 TSKSQ9UJT2 592 aa26.13■■□□□ 1.77
LPCAT3-210ENST00000540090 H7C1D1 291 aa26.12■■□□□ 1.77
LPCAT3-210ENST00000540090 CHL1O00533 1208 aa26.12■■□□□ 1.77
LPCAT3-210ENST00000540090 SHTN1A0MZ66 631 aa26.1■■□□□ 1.77
LPCAT3-210ENST00000540090 CCDC85CA6NKD9 419 aa26.1■■□□□ 1.77
LPCAT3-210ENST00000540090 BRPF1P55201 1214 aaPredicted RBP26.1■■□□□ 1.77
LPCAT3-210ENST00000540090 KRT24Q2M2I5 525 aa26.1■■□□□ 1.77
LPCAT3-210ENST00000540090 FAM161AQ3B820 660 aa26.1■■□□□ 1.77
LPCAT3-210ENST00000540090 DPF2Q92785 391 aa26.1■■□□□ 1.77
LPCAT3-210ENST00000540090 ZNF408Q9H9D4 720 aa26.1■■□□□ 1.77
LPCAT3-210ENST00000540090 RGS19P49795 217 aa26.09■■□□□ 1.77
LPCAT3-210ENST00000540090 RALBP1Q15311 655 aa26.09■■□□□ 1.77
LPCAT3-210ENST00000540090 SF3B3Q15393 1217 aaKnown RBP26.09■■□□□ 1.77
LPCAT3-210ENST00000540090 MICALL2Q8IY33 904 aa26.09■■□□□ 1.77
LPCAT3-210ENST00000540090 PLBD2Q8NHP8 589 aa26.09■■□□□ 1.77
LPCAT3-210ENST00000540090 ANKRD36CQ5JPF3 1778 aa26.09■■□□□ 1.77
LPCAT3-210ENST00000540090 WASHC4Q2M389 1173 aa26.08■■□□□ 1.77
LPCAT3-210ENST00000540090 USP48Q86UV5 1035 aa26.08■■□□□ 1.77
LPCAT3-210ENST00000540090 ISCA1Q9BUE6 129 aa26.08■■□□□ 1.77
LPCAT3-210ENST00000540090 CHPF2Q9P2E5 772 aa26.08■■□□□ 1.77
LPCAT3-210ENST00000540090 ZBTB12Q9Y330 459 aaPredicted RBP26.08■■□□□ 1.77
LPCAT3-210ENST00000540090 ANKRD13DQ6ZTN6 518 aa26.07■■□□□ 1.76
LPCAT3-210ENST00000540090 CELF1Q92879 486 aaKnown RBP26.07■■□□□ 1.76
LPCAT3-210ENST00000540090 ZNF428Q96B54 188 aa26.07■■□□□ 1.76
LPCAT3-210ENST00000540090 NSFL1CQ9UNZ2 370 aaKnown RBP26.07■■□□□ 1.76
LPCAT3-210ENST00000540090 LAMB2P55268 1798 aa26.06■■□□□ 1.76
LPCAT3-210ENST00000540090 PSMD14O00487 310 aa26.06■■□□□ 1.76
LPCAT3-210ENST00000540090 NEUROD2Q15784 382 aa26.06■■□□□ 1.76
LPCAT3-210ENST00000540090 FAM89AQ96GI7 184 aa26.06■■□□□ 1.76
LPCAT3-210ENST00000540090 DUOX1Q9NRD9 1551 aa26.05■■□□□ 1.76
LPCAT3-210ENST00000540090 SAMD7Q7Z3H4 446 aa26.05■■□□□ 1.76
LPCAT3-210ENST00000540090 POLLQ9UGP5 575 aa26.05■■□□□ 1.76
LPCAT3-210ENST00000540090 HOXB7P09629 217 aa26.04■■□□□ 1.76
LPCAT3-210ENST00000540090 NOGQ13253 232 aa26.04■■□□□ 1.76
LPCAT3-210ENST00000540090 HDGFL1Q5TGJ6 251 aa26.04■■□□□ 1.76
LPCAT3-210ENST00000540090 DBNDD1Q9H9R9 158 aa26.04■■□□□ 1.76
LPCAT3-210ENST00000540090 TRIM35Q9UPQ4 493 aa26.04■■□□□ 1.76
LPCAT3-210ENST00000540090 ATP5J2-PTCD1G3V325 749 aa26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 RIMBP2O15034 1052 aa26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 HUNKP57058 714 aa26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 MLLT1Q03111 559 aaPredicted RBP26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 DLK2Q6UY11 383 aa26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 ZIC5Q96T25 663 aa26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 MCOLN1Q9GZU1 580 aa26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 DBF4Q9UBU7 674 aaPredicted RBP26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 LAS1LQ9Y4W2 734 aaKnown RBP26.03■■□□□ 1.76
LPCAT3-210ENST00000540090 C6orf229H3BNL8 230 aa26.02■■□□□ 1.76
LPCAT3-210ENST00000540090 RPS12P25398 132 aaKnown RBP26.02■■□□□ 1.76
LPCAT3-210ENST00000540090 GPSM2P81274 684 aa26.02■■□□□ 1.76
LPCAT3-210ENST00000540090 TRIM28Q13263 835 aaKnown RBP26.02■■□□□ 1.76
LPCAT3-210ENST00000540090 CCDC146Q8IYE0 955 aa26.02■■□□□ 1.76
LPCAT3-210ENST00000540090 TBC1D10BQ4KMP7 808 aaPredicted RBP26.01■■□□□ 1.75
LPCAT3-210ENST00000540090 KCNQ5Q9NR82 932 aa26.01■■□□□ 1.75
LPCAT3-210ENST00000540090 TAF1P21675 1872 aa26■■□□□ 1.75
LPCAT3-210ENST00000540090 EGFRP00533 1210 aa26■■□□□ 1.75
LPCAT3-210ENST00000540090 KRT26Q7Z3Y9 468 aa26■■□□□ 1.75
LPCAT3-210ENST00000540090 RUNDC1Q96C34 613 aa26■■□□□ 1.75
LPCAT3-210ENST00000540090 EYA3Q99504 573 aa26■■□□□ 1.75
LPCAT3-210ENST00000540090 ECE2O60344 883 aa25.99■■□□□ 1.75
LPCAT3-210ENST00000540090 RPS8P62241 208 aaKnown RBP25.99■■□□□ 1.75
LPCAT3-210ENST00000540090 DOK7Q18PE1 504 aa25.99■■□□□ 1.75
LPCAT3-210ENST00000540090 HYPKQ9NX55 129 aa25.99■■□□□ 1.75
LPCAT3-210ENST00000540090 LRRC37AA6NMS7 1700 aa25.99■■□□□ 1.75
LPCAT3-210ENST00000540090 RTL9Q8NET4 1388 aa25.98■■□□□ 1.75
LPCAT3-210ENST00000540090 FAM155AB1AL88 458 aaPredicted RBP25.98■■□□□ 1.75
LPCAT3-210ENST00000540090 IRS4O14654 1257 aaPredicted RBP25.98■■□□□ 1.75
LPCAT3-210ENST00000540090 RGMBQ6NW40 437 aa25.98■■□□□ 1.75
LPCAT3-210ENST00000540090 TBC1D16Q8TBP0 767 aa25.98■■□□□ 1.75
LPCAT3-210ENST00000540090 DCPSQ96C86 337 aaKnown RBP25.98■■□□□ 1.75
LPCAT3-210ENST00000540090 GBA2Q9HCG7 927 aaPredicted RBP25.98■■□□□ 1.75
LPCAT3-210ENST00000540090 SLC34A2O95436 690 aa25.97■■□□□ 1.75
LPCAT3-210ENST00000540090 RTL5Q5HYW3 569 aaPredicted RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1017 ms