RNA–Protein interactions for RNA: ENST00000540029.5

EPB42-203, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 2 BASIC

Gene EPB42, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-203ENST00000540029 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
EPB42-203ENST00000540029 CCDC24Q8N4L8 307 aa17.16■□□□□ 0.34
EPB42-203ENST00000540029 ZNF594Q96JF6 807 aaPredicted RBP17.16■□□□□ 0.34
EPB42-203ENST00000540029 GOLGB1Q14789 3259 aaKnown RBP17.15■□□□□ 0.34
EPB42-203ENST00000540029 MYH3P11055 1940 aa17.15■□□□□ 0.34
EPB42-203ENST00000540029 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
EPB42-203ENST00000540029 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
EPB42-203ENST00000540029 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
EPB42-203ENST00000540029 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
EPB42-203ENST00000540029 CTSWP56202 376 aa17.14■□□□□ 0.33
EPB42-203ENST00000540029 GREM2Q9H772 168 aa17.14■□□□□ 0.33
EPB42-203ENST00000540029 COL4A1P02462 1669 aa17.14■□□□□ 0.33
EPB42-203ENST00000540029 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
EPB42-203ENST00000540029 COPRSQ9NQ92 184 aa17.14■□□□□ 0.33
EPB42-203ENST00000540029 PDE8AO60658 829 aa17.13■□□□□ 0.33
EPB42-203ENST00000540029 SASH1O94885 1247 aa17.13■□□□□ 0.33
EPB42-203ENST00000540029 BAG6P46379 1132 aa17.13■□□□□ 0.33
EPB42-203ENST00000540029 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
EPB42-203ENST00000540029 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
EPB42-203ENST00000540029 LAMB2P55268 1798 aa17.13■□□□□ 0.33
EPB42-203ENST00000540029 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
EPB42-203ENST00000540029 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
EPB42-203ENST00000540029 PUS3Q9BZE2 481 aaKnown RBP17.12■□□□□ 0.33
EPB42-203ENST00000540029 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
EPB42-203ENST00000540029 DDR1Q08345 913 aa17.11■□□□□ 0.33
EPB42-203ENST00000540029 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
EPB42-203ENST00000540029 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
EPB42-203ENST00000540029 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
EPB42-203ENST00000540029 TM4SF1P30408 202 aa17.11■□□□□ 0.33
EPB42-203ENST00000540029 LRRC24Q50LG9 513 aa17.11■□□□□ 0.33
EPB42-203ENST00000540029 TSHZ3Q63HK5 1081 aa17.11■□□□□ 0.33
EPB42-203ENST00000540029 ATG9AQ7Z3C6 839 aa17.11■□□□□ 0.33
EPB42-203ENST00000540029 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
EPB42-203ENST00000540029 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
EPB42-203ENST00000540029 ITGA6P23229 1130 aa17.1■□□□□ 0.33
EPB42-203ENST00000540029 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
EPB42-203ENST00000540029 SALL3Q9BXA9 1300 aa17.1■□□□□ 0.33
EPB42-203ENST00000540029 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
EPB42-203ENST00000540029 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
EPB42-203ENST00000540029 SEC31BQ9NQW1 1179 aa17.09■□□□□ 0.33
EPB42-203ENST00000540029 TAF1P21675 1872 aa17.09■□□□□ 0.33
EPB42-203ENST00000540029 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
EPB42-203ENST00000540029 CCDC57Q2TAC2 916 aa17.09■□□□□ 0.33
EPB42-203ENST00000540029 MSL1Q68DK7 614 aa17.08■□□□□ 0.33
EPB42-203ENST00000540029 POLRMTO00411 1230 aaKnown RBP17.08■□□□□ 0.32
EPB42-203ENST00000540029 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
EPB42-203ENST00000540029 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
EPB42-203ENST00000540029 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
EPB42-203ENST00000540029 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
EPB42-203ENST00000540029 NYXQ9GZU5 481 aa17.08■□□□□ 0.32
EPB42-203ENST00000540029 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
EPB42-203ENST00000540029 GTF2E1P29083 439 aaPredicted RBP17.07■□□□□ 0.32
EPB42-203ENST00000540029 TFCP2Q12800 502 aa17.07■□□□□ 0.32
EPB42-203ENST00000540029 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
EPB42-203ENST00000540029 STK32BQ9NY57 414 aa17.07■□□□□ 0.32
EPB42-203ENST00000540029 EAF2Q96CJ1 260 aaPredicted RBP17.06■□□□□ 0.32
EPB42-203ENST00000540029 EYA2O00167 538 aa17.06■□□□□ 0.32
EPB42-203ENST00000540029 SERPINB2P05120 415 aa17.06■□□□□ 0.32
EPB42-203ENST00000540029 GSPT1P15170 499 aaKnown RBP17.06■□□□□ 0.32
EPB42-203ENST00000540029 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
EPB42-203ENST00000540029 FLAD1Q8NFF5 587 aa17.06■□□□□ 0.32
EPB42-203ENST00000540029 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
EPB42-203ENST00000540029 LRP5O75197 1615 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 PDE1AP54750 535 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 QSER1Q2KHR3 1735 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 SRCAPQ6ZRS2 3230 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 SEC24BO95487 1268 aa17.05■□□□□ 0.32
EPB42-203ENST00000540029 SF3B3Q15393 1217 aaKnown RBP17.05■□□□□ 0.32
EPB42-203ENST00000540029 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
EPB42-203ENST00000540029 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
EPB42-203ENST00000540029 SPEF2Q9C093 1822 aa17.04■□□□□ 0.32
EPB42-203ENST00000540029 CCDC152Q4G0S7 254 aa17.04■□□□□ 0.32
EPB42-203ENST00000540029 MX1P20591 662 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 SLC51AQ86UW1 340 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 NLGN1Q8N2Q7 840 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
EPB42-203ENST00000540029 RIPOR2Q9Y4F9 1068 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 CIAO1O76071 339 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 MMP10P09238 476 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 GSE1Q14687 1217 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 AACSQ86V21 672 aa17.03■□□□□ 0.32
EPB42-203ENST00000540029 NPHP1O15259 732 aa17.02■□□□□ 0.32
EPB42-203ENST00000540029 IL15P40933 162 aaPredicted RBP17.02■□□□□ 0.32
EPB42-203ENST00000540029 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
EPB42-203ENST00000540029 CLASRPQ8N2M8 674 aaKnown RBP17.02■□□□□ 0.32
EPB42-203ENST00000540029 NRXN2Q9P2S2 1712 aa17.02■□□□□ 0.31
EPB42-203ENST00000540029 TNNI3KQ59H18 835 aa17.01■□□□□ 0.31
EPB42-203ENST00000540029 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
EPB42-203ENST00000540029 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
EPB42-203ENST00000540029 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
EPB42-203ENST00000540029 FPGT-TNNI3KV9GXZ4 949 aa17.01■□□□□ 0.31
EPB42-203ENST00000540029 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
EPB42-203ENST00000540029 CELF1Q92879 486 aaKnown RBP17.01■□□□□ 0.31
EPB42-203ENST00000540029 DBNLQ9UJU6 430 aaKnown RBP17.01■□□□□ 0.31
EPB42-203ENST00000540029 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms