RNA–Protein interactions for RNA: ENST00000539928.1

PHC1-207, Transcript of polyhomeotic homolog 1, humanhuman

TSL 4

Gene PHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-207ENST00000539928 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
PHC1-207ENST00000539928 PASKQ96RG2 1323 aa11.91□□□□□ -0.5
PHC1-207ENST00000539928 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
PHC1-207ENST00000539928 AOC3Q16853 763 aa11.91□□□□□ -0.5
PHC1-207ENST00000539928 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
PHC1-207ENST00000539928 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
PHC1-207ENST00000539928 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
PHC1-207ENST00000539928 NIM1KQ8IY84 436 aa11.91□□□□□ -0.5
PHC1-207ENST00000539928 FAM89AQ96GI7 184 aa11.91□□□□□ -0.5
PHC1-207ENST00000539928 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
PHC1-207ENST00000539928 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.5
PHC1-207ENST00000539928 SCNN1DP51172 638 aa11.9□□□□□ -0.5
PHC1-207ENST00000539928 GRAPQ13588 217 aa11.9□□□□□ -0.5
PHC1-207ENST00000539928 MAP1SQ66K74 1059 aaPredicted RBP11.9□□□□□ -0.5
PHC1-207ENST00000539928 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
PHC1-207ENST00000539928 DPP8Q6V1X1 898 aaPredicted RBP11.9□□□□□ -0.5
PHC1-207ENST00000539928 MPNDQ8N594 471 aa11.9□□□□□ -0.5
PHC1-207ENST00000539928 C8orf58Q8NAV2 365 aa11.9□□□□□ -0.5
PHC1-207ENST00000539928 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
PHC1-207ENST00000539928 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
PHC1-207ENST00000539928 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.5
PHC1-207ENST00000539928 MKRN1Q9UHC7 482 aaKnown RBP11.9□□□□□ -0.5
PHC1-207ENST00000539928 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
PHC1-207ENST00000539928 EPS15P42566 896 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 TRIM28Q13263 835 aaKnown RBP11.89□□□□□ -0.51
PHC1-207ENST00000539928 RIC3Q7Z5B4 369 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 CNTROBQ8N137 903 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 SUPT20HQ8NEM7 779 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
PHC1-207ENST00000539928 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
PHC1-207ENST00000539928 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
PHC1-207ENST00000539928 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
PHC1-207ENST00000539928 CELF1Q92879 486 aaKnown RBP11.88□□□□□ -0.51
PHC1-207ENST00000539928 TMEM88BA6NKF7 163 aa11.87□□□□□ -0.51
PHC1-207ENST00000539928 IRS4O14654 1257 aaPredicted RBP11.87□□□□□ -0.51
PHC1-207ENST00000539928 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
PHC1-207ENST00000539928 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
PHC1-207ENST00000539928 CXCL9Q07325 125 aa11.87□□□□□ -0.51
PHC1-207ENST00000539928 KIAA2012Q0VF49 1180 aa11.87□□□□□ -0.51
PHC1-207ENST00000539928 TMC4Q7Z404 712 aa11.87□□□□□ -0.51
PHC1-207ENST00000539928 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
PHC1-207ENST00000539928 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
PHC1-207ENST00000539928 MYD88Q99836 296 aa11.87□□□□□ -0.51
PHC1-207ENST00000539928 COL4A1P02462 1669 aa11.87□□□□□ -0.51
PHC1-207ENST00000539928 RAD17O75943 681 aa11.86□□□□□ -0.51
PHC1-207ENST00000539928 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
PHC1-207ENST00000539928 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
PHC1-207ENST00000539928 JARID2Q92833 1246 aaPredicted RBP11.86□□□□□ -0.51
PHC1-207ENST00000539928 GPRC5DQ9NZD1 345 aa11.86□□□□□ -0.51
PHC1-207ENST00000539928 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
PHC1-207ENST00000539928 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
PHC1-207ENST00000539928 PCNTO95613 3336 aa11.86□□□□□ -0.51
PHC1-207ENST00000539928 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
PHC1-207ENST00000539928 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
PHC1-207ENST00000539928 GMPSP49915 693 aaPredicted RBP11.85□□□□□ -0.51
PHC1-207ENST00000539928 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHC1-207ENST00000539928 CIAPIN1Q6FI81 312 aa11.85□□□□□ -0.51
PHC1-207ENST00000539928 USP50Q70EL3 339 aaPredicted RBP11.85□□□□□ -0.51
PHC1-207ENST00000539928 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
PHC1-207ENST00000539928 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
PHC1-207ENST00000539928 YDJCA8MPS7 323 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
PHC1-207ENST00000539928 VEGFBP49765 207 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
PHC1-207ENST00000539928 GPSM2P81274 684 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 TNIP1Q15025 636 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 CCDC27Q2M243 656 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 WASHC4Q2M389 1173 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
PHC1-207ENST00000539928 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
PHC1-207ENST00000539928 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
PHC1-207ENST00000539928 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
PHC1-207ENST00000539928 TRAF5O00463 557 aa11.83□□□□□ -0.52
PHC1-207ENST00000539928 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
PHC1-207ENST00000539928 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
PHC1-207ENST00000539928 GPR101Q96P66 508 aaPredicted RBP11.83□□□□□ -0.52
PHC1-207ENST00000539928 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
PHC1-207ENST00000539928 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
PHC1-207ENST00000539928 CWC25Q9NXE8 425 aaPredicted RBP11.83□□□□□ -0.52
PHC1-207ENST00000539928 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
PHC1-207ENST00000539928 ABT1Q9ULW3 272 aaKnown RBP11.83□□□□□ -0.52
PHC1-207ENST00000539928 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
PHC1-207ENST00000539928 SHTN1A0MZ66 631 aa11.82□□□□□ -0.52
PHC1-207ENST00000539928 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
PHC1-207ENST00000539928 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
PHC1-207ENST00000539928 ANP32CO43423 234 aa11.82□□□□□ -0.52
PHC1-207ENST00000539928 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
PHC1-207ENST00000539928 TWISTNBQ3B726 338 aaPredicted RBP11.82□□□□□ -0.52
PHC1-207ENST00000539928 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
PHC1-207ENST00000539928 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
PHC1-207ENST00000539928 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
PHC1-207ENST00000539928 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
PHC1-207ENST00000539928 TRPM7Q96QT4 1865 aa11.81□□□□□ -0.52
PHC1-207ENST00000539928 RASSF10A6NK89 507 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms