RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 QTRT2Q9H974 415 aaKnown RBP27.29■■□□□ 1.96
HOMER3-204ENST00000539827 ONECUT3O60422 494 aaPredicted RBP27.28■■□□□ 1.96
HOMER3-204ENST00000539827 CTSWP56202 376 aa27.28■■□□□ 1.96
HOMER3-204ENST00000539827 IFIT5Q13325 482 aaKnown RBP27.28■■□□□ 1.96
HOMER3-204ENST00000539827 TAF7LQ5H9L4 462 aa27.28■■□□□ 1.96
HOMER3-204ENST00000539827 TTLL11Q8NHH1 800 aa27.28■■□□□ 1.96
HOMER3-204ENST00000539827 CD2BP2O95400 341 aaKnown RBP27.28■■□□□ 1.96
HOMER3-204ENST00000539827 CWC27Q6UX04 472 aaKnown RBP27.28■■□□□ 1.96
HOMER3-204ENST00000539827 NEUROD6Q96NK8 337 aa27.28■■□□□ 1.96
HOMER3-204ENST00000539827 DIAPH3Q9NSV4 1193 aa27.28■■□□□ 1.96
HOMER3-204ENST00000539827 SGSM2O43147 1006 aa27.27■■□□□ 1.96
HOMER3-204ENST00000539827 RABEP1Q15276 862 aa27.27■■□□□ 1.96
HOMER3-204ENST00000539827 GREM2Q9H772 168 aa27.27■■□□□ 1.96
HOMER3-204ENST00000539827 PDE8AO60658 829 aa27.26■■□□□ 1.95
HOMER3-204ENST00000539827 ATP5JP18859 108 aa27.26■■□□□ 1.95
HOMER3-204ENST00000539827 TIMM10P62072 90 aa27.26■■□□□ 1.95
HOMER3-204ENST00000539827 SMIM5Q71RC9 77 aa27.26■■□□□ 1.95
HOMER3-204ENST00000539827 GPR108Q9NPR9 543 aa27.26■■□□□ 1.95
HOMER3-204ENST00000539827 ITGA6P23229 1130 aa27.24■■□□□ 1.95
HOMER3-204ENST00000539827 UTP14AQ9BVJ6 771 aaKnown RBP27.24■■□□□ 1.95
HOMER3-204ENST00000539827 CEP126Q9P2H0 1117 aa27.24■■□□□ 1.95
HOMER3-204ENST00000539827 NIP7Q9Y221 180 aaKnown RBP eCLIP27.24■■□□□ 1.95
HOMER3-204ENST00000539827 CNTNAP4Q9C0A0 1308 aa27.24■■□□□ 1.95
HOMER3-204ENST00000539827 EDC3Q96F86 508 aaKnown RBP27.24■■□□□ 1.95
HOMER3-204ENST00000539827 MYH3P11055 1940 aa27.23■■□□□ 1.95
HOMER3-204ENST00000539827 MCCP23508 829 aa27.23■■□□□ 1.95
HOMER3-204ENST00000539827 CCNL1Q9UK58 526 aaPredicted RBP27.23■■□□□ 1.95
HOMER3-204ENST00000539827 ANKRD18BA2A2Z9 1011 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 HCLS1P14317 486 aaPredicted RBP27.22■■□□□ 1.95
HOMER3-204ENST00000539827 PARP10Q53GL7 1025 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 FSD1Q9BTV5 496 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 FBXO3Q9UK99 471 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 NDUFB9Q9Y6M9 179 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 ZNF609O15014 1411 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 SH3TC1Q8TE82 1336 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 RUFY2Q8WXA3 655 aa27.22■■□□□ 1.95
HOMER3-204ENST00000539827 SBF2Q86WG5 1849 aa27.21■■□□□ 1.95
HOMER3-204ENST00000539827 PALD1Q9ULE6 856 aa27.21■■□□□ 1.95
HOMER3-204ENST00000539827 A0A1B0GUL7 405 aa27.2■■□□□ 1.95
HOMER3-204ENST00000539827 ANTXR1Q9H6X2 564 aa27.2■■□□□ 1.95
HOMER3-204ENST00000539827 ZNF652Q9Y2D9 606 aa27.2■■□□□ 1.95
HOMER3-204ENST00000539827 DNAJC2Q99543 621 aaKnown RBP27.2■■□□□ 1.94
HOMER3-204ENST00000539827 LSG1Q9H089 658 aaKnown RBP27.2■■□□□ 1.94
HOMER3-204ENST00000539827 BCORQ6W2J9 1755 aa27.2■■□□□ 1.94
HOMER3-204ENST00000539827 NMIQ13287 307 aaPredicted RBP27.19■■□□□ 1.94
HOMER3-204ENST00000539827 RC3H1Q5TC82 1133 aaKnown RBP27.19■■□□□ 1.94
HOMER3-204ENST00000539827 K7ELQ4 463 aaPredicted RBP27.18■■□□□ 1.94
HOMER3-204ENST00000539827 NTSR2O95665 410 aa27.18■■□□□ 1.94
HOMER3-204ENST00000539827 LDHAL6AQ6ZMR3 332 aa27.18■■□□□ 1.94
HOMER3-204ENST00000539827 KIAA1211Q6ZU35 1233 aa27.18■■□□□ 1.94
HOMER3-204ENST00000539827 FAM227BQ96M60 508 aa27.18■■□□□ 1.94
HOMER3-204ENST00000539827 HIP1O00291 1037 aa27.18■■□□□ 1.94
HOMER3-204ENST00000539827 HAUS7Q99871 368 aa27.18■■□□□ 1.94
HOMER3-204ENST00000539827 RPS6KA4O75676 772 aa27.17■■□□□ 1.94
HOMER3-204ENST00000539827 RIPOR2Q9Y4F9 1068 aa27.17■■□□□ 1.94
HOMER3-204ENST00000539827 GNPATO15228 680 aa27.17■■□□□ 1.94
HOMER3-204ENST00000539827 EPB41L2O43491 1005 aaKnown RBP27.17■■□□□ 1.94
HOMER3-204ENST00000539827 CLEC4GQ6UXB4 293 aa27.17■■□□□ 1.94
HOMER3-204ENST00000539827 AK7Q96M32 723 aa27.17■■□□□ 1.94
HOMER3-204ENST00000539827 CNNM1Q9NRU3 951 aa27.17■■□□□ 1.94
HOMER3-204ENST00000539827 RAD50Q92878 1312 aa27.17■■□□□ 1.94
HOMER3-204ENST00000539827 METTL24Q5JXM2 366 aa27.16■■□□□ 1.94
HOMER3-204ENST00000539827 AKAP2Q9Y2D5 859 aa27.16■■□□□ 1.94
HOMER3-204ENST00000539827 ADORA1P30542 326 aa27.15■■□□□ 1.94
HOMER3-204ENST00000539827 HSPA4P34932 840 aa27.15■■□□□ 1.94
HOMER3-204ENST00000539827 RIC1Q4ADV7 1423 aa27.15■■□□□ 1.94
HOMER3-204ENST00000539827 LY75O60449 1722 aa27.14■■□□□ 1.94
HOMER3-204ENST00000539827 ANAPC15P60006 121 aa27.14■■□□□ 1.94
HOMER3-204ENST00000539827 PTH1RQ03431 593 aa27.14■■□□□ 1.94
HOMER3-204ENST00000539827 BICDL1Q6ZP65 573 aa27.14■■□□□ 1.94
HOMER3-204ENST00000539827 SRP68Q9UHB9 627 aaKnown RBP27.14■■□□□ 1.94
HOMER3-204ENST00000539827 A0A0D9SFI3 127 aa27.13■■□□□ 1.93
HOMER3-204ENST00000539827 USPL1Q5W0Q7 1092 aa27.13■■□□□ 1.93
HOMER3-204ENST00000539827 DDX46Q7L014 1031 aaKnown RBP27.13■■□□□ 1.93
HOMER3-204ENST00000539827 XAGE2Q96GT9 111 aa27.13■■□□□ 1.93
HOMER3-204ENST00000539827 BCL11BQ9C0K0 894 aaPredicted RBP27.13■■□□□ 1.93
HOMER3-204ENST00000539827 BCL2L12Q9HB09 334 aa27.13■■□□□ 1.93
HOMER3-204ENST00000539827 FOXD4L1Q9NU39 408 aa27.13■■□□□ 1.93
HOMER3-204ENST00000539827 DDX60Q8IY21 1712 aaKnown RBP27.13■■□□□ 1.93
HOMER3-204ENST00000539827 ST18O60284 1047 aa27.12■■□□□ 1.93
HOMER3-204ENST00000539827 IFIT1P09914 478 aaKnown RBP27.11■■□□□ 1.93
HOMER3-204ENST00000539827 NFKBIBQ15653 356 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 GORABQ5T7V8 394 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 TBC1D9BQ66K14 1250 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 SEC31BQ9NQW1 1179 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 NARFQ9UHQ1 456 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 RTCBQ9Y3I0 505 aaKnown RBP27.11■■□□□ 1.93
HOMER3-204ENST00000539827 NEK4P51957 841 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 ATP2B3Q16720 1220 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 AMIGO3Q86WK7 504 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 TAF1LQ8IZX4 1826 aa27.11■■□□□ 1.93
HOMER3-204ENST00000539827 GOLIM4O00461 696 aa27.1■■□□□ 1.93
HOMER3-204ENST00000539827 PAG1Q9NWQ8 432 aa27.1■■□□□ 1.93
HOMER3-204ENST00000539827 SCN7AQ01118 1682 aa27.1■■□□□ 1.93
HOMER3-204ENST00000539827 HSP90AA1P07900 732 aaKnown RBP27.09■■□□□ 1.93
HOMER3-204ENST00000539827 ERFEQ4G0M1 354 aa27.09■■□□□ 1.93
HOMER3-204ENST00000539827 TTC39AQ5SRH9 613 aa27.09■■□□□ 1.93
HOMER3-204ENST00000539827 KRT27Q7Z3Y8 459 aa27.09■■□□□ 1.93
HOMER3-204ENST00000539827 CHGBP05060 677 aa27.09■■□□□ 1.93
HOMER3-204ENST00000539827 CCDC152Q4G0S7 254 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms