RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 HACL1Q9UJ83 578 aa24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 GJA3Q9Y6H8 435 aa24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 TAF1P21675 1872 aa24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 SF3B3Q15393 1217 aaKnown RBP24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 NCBP3Q53F19 620 aaKnown RBP24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 EAPPQ56P03 285 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 MPNDQ8N594 471 aa24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 ZBTB38Q8NAP3 1195 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 JARID2Q92833 1246 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 METTL22Q9BUU2 404 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 STK31Q9BXU1 1019 aa24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 MAP3K2Q9Y2U5 619 aa24.54■■□□□ 1.52
TNFRSF1A-212ENST00000539372 SUPT20HQ8NEM7 779 aa24.53■■□□□ 1.52
TNFRSF1A-212ENST00000539372 CELF1Q92879 486 aaKnown RBP24.53■■□□□ 1.52
TNFRSF1A-212ENST00000539372 SCN4AP35499 1836 aa24.53■■□□□ 1.52
TNFRSF1A-212ENST00000539372 FANCIQ9NVI1 1328 aa24.53■■□□□ 1.52
TNFRSF1A-212ENST00000539372 EPHX2P34913 555 aa24.52■■□□□ 1.52
TNFRSF1A-212ENST00000539372 LDHDQ86WU2 507 aa24.52■■□□□ 1.52
TNFRSF1A-212ENST00000539372 CCDC191Q8NCU4 936 aa24.52■■□□□ 1.52
TNFRSF1A-212ENST00000539372 KLRG1Q96E93 195 aa24.52■■□□□ 1.52
TNFRSF1A-212ENST00000539372 RTFDC1Q9BY42 306 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF1A-212ENST00000539372 CWC25Q9NXE8 425 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF1A-212ENST00000539372 COL4A1P02462 1669 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 PI4KAP2A4QPH2 592 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 KSR2Q6VAB6 950 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 G2E3Q7L622 706 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 TMC4Q7Z404 712 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 WDR63Q8IWG1 891 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 PI4KAP1Q8N8J0 262 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 VPS33BQ9H267 617 aa24.5■■□□□ 1.51
TNFRSF1A-212ENST00000539372 SLC4A2P04920 1241 aa24.49■■□□□ 1.51
TNFRSF1A-212ENST00000539372 PCCAP05165 728 aaPredicted RBP24.49■■□□□ 1.51
TNFRSF1A-212ENST00000539372 CLEC11AQ9Y240 323 aa24.49■■□□□ 1.51
TNFRSF1A-212ENST00000539372 LMOD1P29536 600 aaPredicted RBP24.47■■□□□ 1.51
TNFRSF1A-212ENST00000539372 SEC31BQ9NQW1 1179 aa24.47■■□□□ 1.51
TNFRSF1A-212ENST00000539372 ZNRF3Q9ULT6 936 aa24.47■■□□□ 1.51
TNFRSF1A-212ENST00000539372 IGKV5-2P06315 115 aa24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 HSP90B1P14625 803 aaKnown RBP24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 SCNN1DP51172 638 aa24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 EXOSC9Q06265 439 aaKnown RBP24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 KIAA2012Q0VF49 1180 aa24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 PNMA8AQ86V59 439 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 CCDC85AQ96PX6 553 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 SPINK5Q9NQ38 1064 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 NSFL1CQ9UNZ2 370 aaKnown RBP24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 DUOX1Q9NRD9 1551 aa24.46■■□□□ 1.51
TNFRSF1A-212ENST00000539372 LRRC37AA6NMS7 1700 aa24.45■■□□□ 1.5
TNFRSF1A-212ENST00000539372 LTBP1Q14766 1721 aa24.45■■□□□ 1.5
TNFRSF1A-212ENST00000539372 PDE8AO60658 829 aa24.45■■□□□ 1.5
TNFRSF1A-212ENST00000539372 EPS15P42566 896 aa24.45■■□□□ 1.5
TNFRSF1A-212ENST00000539372 RPS8P62241 208 aaKnown RBP24.45■■□□□ 1.5
TNFRSF1A-212ENST00000539372 CXCL9Q07325 125 aa24.45■■□□□ 1.5
TNFRSF1A-212ENST00000539372 VAMP4O75379 141 aa24.44■■□□□ 1.5
TNFRSF1A-212ENST00000539372 GPSM2P81274 684 aa24.44■■□□□ 1.5
TNFRSF1A-212ENST00000539372 NEXNQ0ZGT2 675 aa24.44■■□□□ 1.5
TNFRSF1A-212ENST00000539372 CWF19L2Q2TBE0 894 aaKnown RBP24.44■■□□□ 1.5
TNFRSF1A-212ENST00000539372 CCDC152Q4G0S7 254 aa24.44■■□□□ 1.5
TNFRSF1A-212ENST00000539372 FLIIQ13045 1269 aa24.43■■□□□ 1.5
TNFRSF1A-212ENST00000539372 ADAMTSL1Q8N6G6 1762 aa24.42■■□□□ 1.5
TNFRSF1A-212ENST00000539372 PASKQ96RG2 1323 aa24.42■■□□□ 1.5
TNFRSF1A-212ENST00000539372 RAD17O75943 681 aa24.42■■□□□ 1.5
TNFRSF1A-212ENST00000539372 MAP1SQ66K74 1059 aaPredicted RBP24.42■■□□□ 1.5
TNFRSF1A-212ENST00000539372 POLLQ9UGP5 575 aa24.42■■□□□ 1.5
TNFRSF1A-212ENST00000539372 CDHR2Q9BYE9 1310 aa24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 NEURL1BA8MQ27 555 aa24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 C6orf229H3BNL8 230 aa24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 RIMBP2O15034 1052 aa24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 ITGBL1O95965 494 aaPredicted RBP24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 WASHC4Q2M389 1173 aa24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 JMYQ8N9B5 988 aa24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 CREBZFQ9NS37 354 aa24.41■■□□□ 1.5
TNFRSF1A-212ENST00000539372 YDJCA8MPS7 323 aa24.4■■□□□ 1.5
TNFRSF1A-212ENST00000539372 FKBP5Q13451 457 aaPredicted RBP24.4■■□□□ 1.5
TNFRSF1A-212ENST00000539372 CIAPIN1Q6FI81 312 aa24.4■■□□□ 1.5
TNFRSF1A-212ENST00000539372 CNTROBQ8N137 903 aa24.4■■□□□ 1.5
TNFRSF1A-212ENST00000539372 GPR101Q96P66 508 aaPredicted RBP24.4■■□□□ 1.5
TNFRSF1A-212ENST00000539372 GMPSP49915 693 aaPredicted RBP24.39■■□□□ 1.49
TNFRSF1A-212ENST00000539372 CTSWP56202 376 aa24.39■■□□□ 1.49
TNFRSF1A-212ENST00000539372 MYH16Q9H6N6 1097 aa24.39■■□□□ 1.49
TNFRSF1A-212ENST00000539372 GPRC5DQ9NZD1 345 aa24.39■■□□□ 1.49
TNFRSF1A-212ENST00000539372 DBNDD1Q9H9R9 158 aa24.38■■□□□ 1.49
TNFRSF1A-212ENST00000539372 TNIP1Q15025 636 aa24.37■■□□□ 1.49
TNFRSF1A-212ENST00000539372 UBE3BQ7Z3V4 1068 aa24.37■■□□□ 1.49
TNFRSF1A-212ENST00000539372 TBC1D16Q8TBP0 767 aa24.37■■□□□ 1.49
TNFRSF1A-212ENST00000539372 DNAAF4Q8WXU2 420 aa24.37■■□□□ 1.49
TNFRSF1A-212ENST00000539372 BCL2L13Q9BXK5 485 aa24.37■■□□□ 1.49
TNFRSF1A-212ENST00000539372 ANKIB1Q9P2G1 1089 aa24.37■■□□□ 1.49
TNFRSF1A-212ENST00000539372 MKRN1Q9UHC7 482 aaKnown RBP24.37■■□□□ 1.49
TNFRSF1A-212ENST00000539372 DOK7Q18PE1 504 aa24.36■■□□□ 1.49
TNFRSF1A-212ENST00000539372 USP50Q70EL3 339 aaPredicted RBP24.36■■□□□ 1.49
TNFRSF1A-212ENST00000539372 ANKRD18AQ8IVF6 992 aa24.36■■□□□ 1.49
TNFRSF1A-212ENST00000539372 EYA3Q99504 573 aa24.36■■□□□ 1.49
TNFRSF1A-212ENST00000539372 H7C1W4 665 aa24.35■■□□□ 1.49
TNFRSF1A-212ENST00000539372 UFL1O94874 794 aa24.35■■□□□ 1.49
TNFRSF1A-212ENST00000539372 GCKRQ14397 625 aa24.35■■□□□ 1.49
TNFRSF1A-212ENST00000539372 TTLL11Q8NHH1 800 aa24.35■■□□□ 1.49
TNFRSF1A-212ENST00000539372 GREM2Q9H772 168 aa24.35■■□□□ 1.49
TNFRSF1A-212ENST00000539372 ADARB2Q9NS39 739 aaKnown RBP24.35■■□□□ 1.49
TNFRSF1A-212ENST00000539372 TMEM88BA6NKF7 163 aa24.34■■□□□ 1.49
TNFRSF1A-212ENST00000539372 PODXL2Q9NZ53 605 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms