RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 JARID2Q92833 1246 aaPredicted RBP10.88□□□□□ -0.67
DDB1-213ENST00000539332 TFCP2L1Q9NZI6 479 aa10.88□□□□□ -0.67
DDB1-213ENST00000539332 AOX1Q06278 1338 aa10.88□□□□□ -0.67
DDB1-213ENST00000539332 DDX60Q8IY21 1712 aaKnown RBP10.88□□□□□ -0.67
DDB1-213ENST00000539332 GSPT1P15170 499 aaKnown RBP10.88□□□□□ -0.67
DDB1-213ENST00000539332 C16orf71Q8IYS4 520 aaPredicted RBP10.88□□□□□ -0.67
DDB1-213ENST00000539332 OTUD7AQ8TE49 926 aaPredicted RBP10.88□□□□□ -0.67
DDB1-213ENST00000539332 KIF1BPQ96EK5 621 aa10.88□□□□□ -0.67
DDB1-213ENST00000539332 STAP2Q9UGK3 403 aa10.88□□□□□ -0.67
DDB1-213ENST00000539332 NIP7Q9Y221 180 aaKnown RBP eCLIP10.88□□□□□ -0.67
DDB1-213ENST00000539332 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
DDB1-213ENST00000539332 SEC24BO95487 1268 aa10.87□□□□□ -0.67
DDB1-213ENST00000539332 PCCAP05165 728 aaPredicted RBP10.87□□□□□ -0.67
DDB1-213ENST00000539332 PDE1AP54750 535 aa10.87□□□□□ -0.67
DDB1-213ENST00000539332 QSER1Q2KHR3 1735 aa10.87□□□□□ -0.67
DDB1-213ENST00000539332 EPHA10Q5JZY3 1008 aa10.87□□□□□ -0.67
DDB1-213ENST00000539332 ZBTB38Q8NAP3 1195 aaPredicted RBP10.87□□□□□ -0.67
DDB1-213ENST00000539332 FAM89AQ96GI7 184 aa10.87□□□□□ -0.67
DDB1-213ENST00000539332 SURF6O75683 361 aaKnown RBP10.86□□□□□ -0.67
DDB1-213ENST00000539332 PARP10Q53GL7 1025 aa10.86□□□□□ -0.67
DDB1-213ENST00000539332 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
DDB1-213ENST00000539332 RHPN1Q8TCX5 695 aa10.86□□□□□ -0.67
DDB1-213ENST00000539332 TRMT112Q9UI30 125 aaKnown RBP10.86□□□□□ -0.67
DDB1-213ENST00000539332 RFX5P48382 616 aaPredicted RBP10.85□□□□□ -0.67
DDB1-213ENST00000539332 SUSD4Q5VX71 490 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 ERC1Q8IUD2 1116 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 COPRSQ9NQ92 184 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 LRP5O75197 1615 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 GYS1P13807 737 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 FOXO4P98177 505 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 BICDL1Q6ZP65 573 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 COL23A1Q86Y22 540 aaPredicted RBP10.85□□□□□ -0.67
DDB1-213ENST00000539332 FLAD1Q8NFF5 587 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 UTP14AQ9BVJ6 771 aaKnown RBP10.85□□□□□ -0.67
DDB1-213ENST00000539332 PLA2G12BQ9BX93 195 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 CDHR2Q9BYE9 1310 aa10.85□□□□□ -0.67
DDB1-213ENST00000539332 FAM177BA6PVY3 158 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 APBB1O00213 710 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 NTSR2O95665 410 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 MX1P20591 662 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 SLC15A2Q16348 729 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 TBC1D32Q96NH3 1257 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 SETDB2Q96T68 719 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 PNPLA7Q6ZV29 1317 aa10.84□□□□□ -0.67
DDB1-213ENST00000539332 IRS4O14654 1257 aaPredicted RBP10.83□□□□□ -0.68
DDB1-213ENST00000539332 STK32BQ9NY57 414 aa10.83□□□□□ -0.68
DDB1-213ENST00000539332 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
DDB1-213ENST00000539332 PA2G4Q9UQ80 394 aaKnown RBP10.83□□□□□ -0.68
DDB1-213ENST00000539332 SH3TC1Q8TE82 1336 aa10.83□□□□□ -0.68
DDB1-213ENST00000539332 A0A1B0GUL6 1792 aa10.83□□□□□ -0.68
DDB1-213ENST00000539332 CDC45O75419 566 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 PTPN12Q05209 780 aaKnown RBP10.82□□□□□ -0.68
DDB1-213ENST00000539332 NFIXQ14938 502 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 LMBR1LQ6UX01 489 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 TBC1D9Q6ZT07 1266 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 UPF1Q92900 1129 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDB1-213ENST00000539332 SASH1O94885 1247 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 IL1RAPL2Q9NP60 686 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 CARMIL3Q8ND23 1372 aa10.82□□□□□ -0.68
DDB1-213ENST00000539332 ARAP2Q8WZ64 1704 aa10.81□□□□□ -0.68
DDB1-213ENST00000539332 SDSP20132 328 aa10.81□□□□□ -0.68
DDB1-213ENST00000539332 L1TD1Q5T7N2 865 aaKnown RBP10.81□□□□□ -0.68
DDB1-213ENST00000539332 NBPF5PQ86XG9 351 aaPredicted RBP10.81□□□□□ -0.68
DDB1-213ENST00000539332 PI4K2BQ8TCG2 481 aa10.81□□□□□ -0.68
DDB1-213ENST00000539332 NYXQ9GZU5 481 aa10.81□□□□□ -0.68
DDB1-213ENST00000539332 TTC41PQ6P2S7 1318 aa10.81□□□□□ -0.68
DDB1-213ENST00000539332 SPEF2Q9C093 1822 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 PDE8AO60658 829 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 CSF1RP07333 972 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 HCLS1P14317 486 aaPredicted RBP10.8□□□□□ -0.68
DDB1-213ENST00000539332 TM4SF1P30408 202 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 CTSWP56202 376 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 G3BP1Q13283 466 aaKnown RBP eCLIP10.8□□□□□ -0.689e-8■■■□□ 16.5
DDB1-213ENST00000539332 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 TPTE2Q6XPS3 522 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 NLGN1Q8N2Q7 840 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 UPF2Q9HAU5 1272 aaKnown RBP10.8□□□□□ -0.68
DDB1-213ENST00000539332 CHMP3Q9Y3E7 222 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 HMGB1P09429 215 aaKnown RBP10.8□□□□□ -0.68
DDB1-213ENST00000539332 HSP90B1P14625 803 aaKnown RBP10.8□□□□□ -0.68
DDB1-213ENST00000539332 CLASRPQ8N2M8 674 aaKnown RBP10.8□□□□□ -0.68
DDB1-213ENST00000539332 TTLL11Q8NHH1 800 aa10.8□□□□□ -0.68
DDB1-213ENST00000539332 ABCC12Q96J65 1359 aa10.79□□□□□ -0.68
DDB1-213ENST00000539332 GTF2E1P29083 439 aaPredicted RBP10.79□□□□□ -0.68
DDB1-213ENST00000539332 RBM25P49756 843 aaKnown RBP10.79□□□□□ -0.68
DDB1-213ENST00000539332 DDR1Q08345 913 aa10.79□□□□□ -0.68
DDB1-213ENST00000539332 OS9Q13438 667 aaPredicted RBP10.79□□□□□ -0.68
DDB1-213ENST00000539332 SLC10A5Q5PT55 438 aa10.79□□□□□ -0.68
DDB1-213ENST00000539332 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
DDB1-213ENST00000539332 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.79□□□□□ -0.68
DDB1-213ENST00000539332 MYH7P12883 1935 aa10.79□□□□□ -0.68
DDB1-213ENST00000539332 TAF1P21675 1872 aa10.79□□□□□ -0.68
DDB1-213ENST00000539332 NRXN2Q9P2S2 1712 aa10.78□□□□□ -0.68
DDB1-213ENST00000539332 CIAO1O76071 339 aa10.78□□□□□ -0.68
DDB1-213ENST00000539332 TSHZ3Q63HK5 1081 aa10.78□□□□□ -0.68
DDB1-213ENST00000539332 CNBD1Q8NA66 436 aa10.78□□□□□ -0.68
DDB1-213ENST00000539332 CCDC85AQ96PX6 553 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms