RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 C11orf91Q3C1V1 193 aa11.36□□□□□ -0.59
CCDC7-209ENST00000539197 NKAPLQ5M9Q1 402 aa11.36□□□□□ -0.59
CCDC7-209ENST00000539197 FAM35AQ86V20 835 aa11.36□□□□□ -0.59
CCDC7-209ENST00000539197 DMRTC2Q8IXT2 367 aaPredicted RBP11.36□□□□□ -0.59
CCDC7-209ENST00000539197 RGS9O75916 674 aaPredicted RBP11.35□□□□□ -0.59
CCDC7-209ENST00000539197 ELNP15502 786 aa11.35□□□□□ -0.59
CCDC7-209ENST00000539197 ARSDP51689 593 aa11.35□□□□□ -0.59
CCDC7-209ENST00000539197 MYO19Q96H55 970 aa11.35□□□□□ -0.59
CCDC7-209ENST00000539197 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC7-209ENST00000539197 ZMIZ1Q9ULJ6 1067 aa11.35□□□□□ -0.59
CCDC7-209ENST00000539197 PRMT3O60678 531 aa11.34□□□□□ -0.59
CCDC7-209ENST00000539197 MAP3K6O95382 1288 aa11.34□□□□□ -0.59
CCDC7-209ENST00000539197 DHX32Q7L7V1 743 aaKnown RBP11.34□□□□□ -0.59
CCDC7-209ENST00000539197 COX20Q5RI15 118 aa11.33□□□□□ -0.6
CCDC7-209ENST00000539197 PERM1Q5SV97 790 aa11.33□□□□□ -0.6
CCDC7-209ENST00000539197 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
CCDC7-209ENST00000539197 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
CCDC7-209ENST00000539197 LPIN3Q9BQK8 851 aa11.33□□□□□ -0.6
CCDC7-209ENST00000539197 C11orf16Q9NQ32 467 aa11.33□□□□□ -0.6
CCDC7-209ENST00000539197 GRIK5Q16478 980 aa11.32□□□□□ -0.6
CCDC7-209ENST00000539197 CAPN12Q6ZSI9 719 aa11.32□□□□□ -0.6
CCDC7-209ENST00000539197 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
CCDC7-209ENST00000539197 SAP130Q9H0E3 1048 aa11.32□□□□□ -0.6
CCDC7-209ENST00000539197 RTCBQ9Y3I0 505 aaKnown RBP11.32□□□□□ -0.6
CCDC7-209ENST00000539197 RARAP10276 462 aa11.31□□□□□ -0.6
CCDC7-209ENST00000539197 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
CCDC7-209ENST00000539197 TREML1Q86YW5 311 aa11.31□□□□□ -0.6
CCDC7-209ENST00000539197 RGL4Q8IZJ4 473 aa11.31□□□□□ -0.6
CCDC7-209ENST00000539197 NRG1Q02297 640 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-209ENST00000539197 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
CCDC7-209ENST00000539197 ADGRE1Q14246 886 aa11.3□□□□□ -0.6
CCDC7-209ENST00000539197 MBTPS1Q14703 1052 aa11.3□□□□□ -0.6
CCDC7-209ENST00000539197 FOXD4L6Q3SYB3 417 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-209ENST00000539197 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
CCDC7-209ENST00000539197 FOXD4L3Q6VB84 417 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-209ENST00000539197 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
CCDC7-209ENST00000539197 LENG1Q96BZ8 264 aaPredicted RBP11.3□□□□□ -0.6
CCDC7-209ENST00000539197 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.29□□□□□ -0.6
CCDC7-209ENST00000539197 DYRK3O43781 588 aa11.29□□□□□ -0.6
CCDC7-209ENST00000539197 OCLNQ16625 522 aa11.29□□□□□ -0.6
CCDC7-209ENST00000539197 FMR1NBQ8N0W7 255 aaPredicted RBP11.29□□□□□ -0.6
CCDC7-209ENST00000539197 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
CCDC7-209ENST00000539197 FRRS1LQ9P0K9 344 aa11.29□□□□□ -0.6
CCDC7-209ENST00000539197 ARID4AP29374 1257 aaPredicted RBP11.28□□□□□ -0.6
CCDC7-209ENST00000539197 ETFBKMTQ8IXQ9 262 aa11.28□□□□□ -0.6
CCDC7-209ENST00000539197 XYLBO75191 536 aa11.27□□□□□ -0.61
CCDC7-209ENST00000539197 SRPK2P78362 688 aaKnown RBP11.27□□□□□ -0.61
CCDC7-209ENST00000539197 MSL1Q68DK7 614 aa11.27□□□□□ -0.61
CCDC7-209ENST00000539197 ELMSAN1Q6PJG2 1045 aa11.27□□□□□ -0.61
CCDC7-209ENST00000539197 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
CCDC7-209ENST00000539197 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
CCDC7-209ENST00000539197 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
CCDC7-209ENST00000539197 GPLD1P80108 840 aa11.26□□□□□ -0.61
CCDC7-209ENST00000539197 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
CCDC7-209ENST00000539197 SMG9Q9H0W8 520 aaKnown RBP11.26□□□□□ -0.61
CCDC7-209ENST00000539197 USP21Q9UK80 565 aa11.26□□□□□ -0.61
CCDC7-209ENST00000539197 J3QW42 95 aa11.25□□□□□ -0.61
CCDC7-209ENST00000539197 DTWD1Q8N5C7 304 aa11.25□□□□□ -0.61
CCDC7-209ENST00000539197 SWI5Q1ZZU3 235 aa11.24□□□□□ -0.61
CCDC7-209ENST00000539197 TTC9Q92623 222 aa11.24□□□□□ -0.61
CCDC7-209ENST00000539197 EGFRP00533 1210 aa11.23□□□□□ -0.61
CCDC7-209ENST00000539197 NRLP54845 237 aa11.23□□□□□ -0.61
CCDC7-209ENST00000539197 NAA30Q147X3 362 aaPredicted RBP11.23□□□□□ -0.61
CCDC7-209ENST00000539197 WFDC8Q8IUA0 241 aa11.23□□□□□ -0.61
CCDC7-209ENST00000539197 TLR7Q9NYK1 1049 aaKnown RBP11.23□□□□□ -0.61
CCDC7-209ENST00000539197 MMP20O60882 483 aa11.22□□□□□ -0.61
CCDC7-209ENST00000539197 H2AFB1P0C5Y9 115 aa11.22□□□□□ -0.61
CCDC7-209ENST00000539197 H2AFB2P0C5Z0 115 aa11.22□□□□□ -0.61
CCDC7-209ENST00000539197 EIF2AK2P19525 551 aaKnown RBP11.22□□□□□ -0.61
CCDC7-209ENST00000539197 ELOAQ14241 798 aaKnown RBP11.22□□□□□ -0.61
CCDC7-209ENST00000539197 TRIP4Q15650 581 aaPredicted RBP11.22□□□□□ -0.61
CCDC7-209ENST00000539197 PRSS36Q5K4E3 855 aa11.22□□□□□ -0.61
CCDC7-209ENST00000539197 TMEM164Q5U3C3 297 aa11.22□□□□□ -0.61
CCDC7-209ENST00000539197 NSUN5Q96P11 429 aaKnown RBP11.22□□□□□ -0.61
CCDC7-209ENST00000539197 TNFRSF10BO14763 440 aa11.21□□□□□ -0.61
CCDC7-209ENST00000539197 DEAF1O75398 565 aaPredicted RBP11.21□□□□□ -0.61
CCDC7-209ENST00000539197 FBXO11Q86XK2 927 aa11.21□□□□□ -0.61
CCDC7-209ENST00000539197 C16orf46Q6P387 395 aa11.2□□□□□ -0.62
CCDC7-209ENST00000539197 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
CCDC7-209ENST00000539197 SCO2A0A1W2PP80 73 aa11.19□□□□□ -0.62
CCDC7-209ENST00000539197 PSAPP07602 524 aa11.19□□□□□ -0.62
CCDC7-209ENST00000539197 TP53INP1Q96A56 240 aa11.19□□□□□ -0.62
CCDC7-209ENST00000539197 CXXC1Q9P0U4 656 aaPredicted RBP11.19□□□□□ -0.62
CCDC7-209ENST00000539197 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
CCDC7-209ENST00000539197 SIK1P57059 783 aa11.18□□□□□ -0.62
CCDC7-209ENST00000539197 PLD4Q96BZ4 506 aa11.18□□□□□ -0.62
CCDC7-209ENST00000539197 SSBP4Q9BWG4 385 aaPredicted RBP11.18□□□□□ -0.62
CCDC7-209ENST00000539197 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
CCDC7-209ENST00000539197 IREB2P48200 963 aaKnown RBP11.17□□□□□ -0.62
CCDC7-209ENST00000539197 GDF6Q6KF10 455 aaPredicted RBP11.17□□□□□ -0.62
CCDC7-209ENST00000539197 ZBTB39O15060 712 aa11.16□□□□□ -0.62
CCDC7-209ENST00000539197 ATG7O95352 703 aa11.16□□□□□ -0.62
CCDC7-209ENST00000539197 NOS3P29474 1203 aa11.16□□□□□ -0.62
CCDC7-209ENST00000539197 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
CCDC7-209ENST00000539197 GHRHP01286 108 aa11.15□□□□□ -0.62
CCDC7-209ENST00000539197 COL13A1Q5TAT6 717 aaPredicted RBP11.15□□□□□ -0.62
CCDC7-209ENST00000539197 IGF2-ASQ6U949 168 aa11.15□□□□□ -0.62
CCDC7-209ENST00000539197 COL26A1Q96A83 441 aa11.15□□□□□ -0.62
CCDC7-209ENST00000539197 RBSNQ9H1K0 784 aa11.14□□□□□ -0.63
CCDC7-209ENST00000539197 TRIM33Q9UPN9 1127 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms