RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-210	ENST00000539191	ATP6V0A2	Q9Y487	856 aa		10.87	□□□□□ -0.67
NPIPB4-210	ENST00000539191	LRRC37A	A6NMS7	1700 aa		10.87	□□□□□ -0.67
NPIPB4-210	ENST00000539191	ATP5J2-PTCD1	G3V325	749 aa		10.86	□□□□□ -0.67
NPIPB4-210	ENST00000539191	RIMBP2	O15034	1052 aa		10.86	□□□□□ -0.67
NPIPB4-210	ENST00000539191	CELF2	O95319	508 aa	Known RBP	10.86	□□□□□ -0.67
NPIPB4-210	ENST00000539191	NLRP10	Q86W26	655 aa		10.86	□□□□□ -0.67
NPIPB4-210	ENST00000539191	JARID2	Q92833	1246 aa	Predicted RBP	10.86	□□□□□ -0.67
NPIPB4-210	ENST00000539191	CCDC85C	A6NKD9	419 aa		10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	NEFM	P07197	916 aa		10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	DPP8	Q6V1X1	898 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	SAMD7	Q7Z3H4	446 aa		10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	PNISR	Q8TF01	805 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	CELF1	Q92879	486 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	NLRP3	Q96P20	1036 aa		10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	DBNDD1	Q9H9R9	158 aa		10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	CHPF2	Q9P2E5	772 aa		10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	TRMT112	Q9UI30	125 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	SCAF8	Q9UPN6	1271 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPB4-210	ENST00000539191	ASTN2	O75129	1339 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	DOK7	Q18PE1	504 aa		10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	RBM26	Q5T8P6	1007 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	PPP1R42	Q7Z4L9	355 aa		10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	USP48	Q86UV5	1035 aa		10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	CFAP44	Q96MT7	982 aa		10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	BCL2L13	Q9BXK5	485 aa		10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	ZNRF3	Q9ULT6	936 aa		10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	TLL2	Q9Y6L7	1015 aa		10.84	□□□□□ -0.67
NPIPB4-210	ENST00000539191	ADM5	C9JUS6	153 aa		10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	RGL2	O15211	777 aa		10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	TMPO	P42166	694 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	CC2D2B	Q6DHV5	1058 aa		10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	USP50	Q70EL3	339 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	SAPCD2	Q86UD0	394 aa		10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	MPND	Q8N594	471 aa		10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	FAM89A	Q96GI7	184 aa		10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	ADARB2	Q9NS39	739 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-210	ENST00000539191	WTIP	A6NIX2	430 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-210	ENST00000539191	MAP2K1	Q02750	393 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-210	ENST00000539191	PARP10	Q53GL7	1025 aa		10.82	□□□□□ -0.68
NPIPB4-210	ENST00000539191	SLC10A5	Q5PT55	438 aa		10.82	□□□□□ -0.68
NPIPB4-210	ENST00000539191	CIAPIN1	Q6FI81	312 aa		10.82	□□□□□ -0.68
NPIPB4-210	ENST00000539191	MICALL2	Q8IY33	904 aa		10.82	□□□□□ -0.68
NPIPB4-210	ENST00000539191	CNOT7	Q9UIV1	285 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-210	ENST00000539191	RTL9	Q8NET4	1388 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	PSMD14	O00487	310 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	GPSM2	P81274	684 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	KIAA2012	Q0VF49	1180 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	TCIRG1	Q13488	830 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	DDX46	Q7L014	1031 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	SP8	Q8IXZ3	490 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	POLL	Q9UGP5	575 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	TRIM35	Q9UPQ4	493 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	PDE4DIP	Q5VU43	2346 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	SH3TC1	Q8TE82	1336 aa		10.81	□□□□□ -0.68
NPIPB4-210	ENST00000539191	ELL2	O00472	640 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPB4-210	ENST00000539191	GRAP	Q13588	217 aa		10.8	□□□□□ -0.68
NPIPB4-210	ENST00000539191	GRAPL	Q8TC17	118 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPB4-210	ENST00000539191	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPB4-210	ENST00000539191	SEC31B	Q9NQW1	1179 aa		10.8	□□□□□ -0.68
NPIPB4-210	ENST00000539191	ERBB4	Q15303	1308 aa		10.8	□□□□□ -0.68
NPIPB4-210	ENST00000539191	AKAP11	Q9UKA4	1901 aa		10.8	□□□□□ -0.68
NPIPB4-210	ENST00000539191	C6orf229	H3BNL8	230 aa		10.79	□□□□□ -0.68
NPIPB4-210	ENST00000539191	ECE1	P42892	770 aa		10.79	□□□□□ -0.68
NPIPB4-210	ENST00000539191	DDX10	Q13206	875 aa	Known RBP	10.79	□□□□□ -0.68
NPIPB4-210	ENST00000539191	HDGFL1	Q5TGJ6	251 aa		10.79	□□□□□ -0.68
NPIPB4-210	ENST00000539191	BEGAIN	Q9BUH8	593 aa		10.79	□□□□□ -0.68
NPIPB4-210	ENST00000539191	MCOLN1	Q9GZU1	580 aa		10.79	□□□□□ -0.68
NPIPB4-210	ENST00000539191	TMX4	Q9H1E5	349 aa	Predicted RBP	10.79	□□□□□ -0.68
NPIPB4-210	ENST00000539191	BBOX1	O75936	387 aa		10.78	□□□□□ -0.68
NPIPB4-210	ENST00000539191	HUNK	P57058	714 aa		10.78	□□□□□ -0.68
NPIPB4-210	ENST00000539191	MOB2	Q70IA6	237 aa		10.78	□□□□□ -0.68
NPIPB4-210	ENST00000539191	PHAX	Q9H814	394 aa	Known RBP	10.78	□□□□□ -0.68
NPIPB4-210	ENST00000539191	ZNF646	O15015	1829 aa	Predicted RBP	10.78	□□□□□ -0.68
NPIPB4-210	ENST00000539191	PSME4	Q14997	1843 aa		10.78	□□□□□ -0.68
NPIPB4-210	ENST00000539191	CHL1	O00533	1208 aa		10.77	□□□□□ -0.69
NPIPB4-210	ENST00000539191	ECE2	O60344	883 aa		10.77	□□□□□ -0.69
NPIPB4-210	ENST00000539191	DGKZ	Q13574	1117 aa		10.77	□□□□□ -0.69
NPIPB4-210	ENST00000539191	WASHC4	Q2M389	1173 aa		10.77	□□□□□ -0.69
NPIPB4-210	ENST00000539191	SUPT20H	Q8NEM7	779 aa		10.77	□□□□□ -0.69
NPIPB4-210	ENST00000539191	ISCA1	Q9BUE6	129 aa		10.77	□□□□□ -0.69
NPIPB4-210	ENST00000539191	MXD3	Q9BW11	206 aa		10.77	□□□□□ -0.69
NPIPB4-210	ENST00000539191	CENPF	P49454	3210 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191		H7C1D1	291 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	SOX10	P56693	466 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	HSP90AB3P	Q58FF7	597 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	PRAMEF18	Q5VWM3	479 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	DUSP27	Q5VZP5	1158 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	ANKRD13D	Q6ZTN6	518 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	KRT26	Q7Z3Y9	468 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	MBIP	Q9NS73	344 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	PGAP2	Q9UHJ9	254 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	ADAMTS8	Q9UP79	889 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	MYH3	P11055	1940 aa		10.76	□□□□□ -0.69
NPIPB4-210	ENST00000539191	FAM155A	B1AL88	458 aa	Predicted RBP	10.75	□□□□□ -0.69
NPIPB4-210	ENST00000539191	IRS4	O14654	1257 aa	Predicted RBP	10.75	□□□□□ -0.69
NPIPB4-210	ENST00000539191	TNIP1	Q15025	636 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms