RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 SNRKQ9NRH2 765 aa10.77□□□□□ -0.68
GGA3-202ENST00000538886 GLI3P10071 1580 aa10.77□□□□□ -0.69
GGA3-202ENST00000538886 SMARCA5O60264 1052 aaPredicted RBP10.77□□□□□ -0.69
GGA3-202ENST00000538886 PDIA6Q15084 440 aa10.77□□□□□ -0.69
GGA3-202ENST00000538886 DOK7Q18PE1 504 aa10.77□□□□□ -0.69
GGA3-202ENST00000538886 CLASRPQ8N2M8 674 aaKnown RBP10.77□□□□□ -0.69
GGA3-202ENST00000538886 ZBTB38Q8NAP3 1195 aaPredicted RBP10.77□□□□□ -0.69
GGA3-202ENST00000538886 ERBB4Q15303 1308 aa10.77□□□□□ -0.69
GGA3-202ENST00000538886 ERVV-1B6SEH8 477 aa10.76□□□□□ -0.69
GGA3-202ENST00000538886 ALDH1B1P30837 517 aa10.76□□□□□ -0.69
GGA3-202ENST00000538886 SHPRHQ149N8 1683 aa10.76□□□□□ -0.69
GGA3-202ENST00000538886 PPIP5K2O43314 1243 aa10.76□□□□□ -0.69
GGA3-202ENST00000538886 MAP4K4O95819 1239 aaPredicted RBP10.76□□□□□ -0.69
GGA3-202ENST00000538886 CNKSR1Q969H4 720 aa10.76□□□□□ -0.69
GGA3-202ENST00000538886 ALDH1L1O75891 902 aa10.76□□□□□ -0.69
GGA3-202ENST00000538886 IGKV5-2P06315 115 aa10.76□□□□□ -0.69
GGA3-202ENST00000538886 DDR1Q08345 913 aa10.75□□□□□ -0.69
GGA3-202ENST00000538886 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
GGA3-202ENST00000538886 AACSQ86V21 672 aa10.75□□□□□ -0.69
GGA3-202ENST00000538886 BEND3Q5T5X7 828 aa10.75□□□□□ -0.69
GGA3-202ENST00000538886 MPNDQ8N594 471 aa10.75□□□□□ -0.69
GGA3-202ENST00000538886 NLGN2Q8NFZ4 835 aa10.75□□□□□ -0.69
GGA3-202ENST00000538886 AKT1S1Q96B36 256 aa10.75□□□□□ -0.69
GGA3-202ENST00000538886 SYT17Q9BSW7 474 aa10.75□□□□□ -0.69
GGA3-202ENST00000538886 IFIT1P09914 478 aaKnown RBP10.74□□□□□ -0.69
GGA3-202ENST00000538886 CAVIN4Q5BKX8 364 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 USP44Q9H0E7 712 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 CARMIL3Q8ND23 1372 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 PDE3AQ14432 1141 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 ZNF521Q96K83 1311 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 CTSWP56202 376 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 TIMM10P62072 90 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 TSHZ3Q63HK5 1081 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 STK11IPQ8N1F8 1099 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 CELF1Q92879 486 aaKnown RBP10.74□□□□□ -0.69
GGA3-202ENST00000538886 GPATCH3Q96I76 525 aa10.74□□□□□ -0.69
GGA3-202ENST00000538886 ZNF277Q9NRM2 450 aaPredicted RBP10.74□□□□□ -0.69
GGA3-202ENST00000538886 EAPPQ56P03 285 aaPredicted RBP10.73□□□□□ -0.69
GGA3-202ENST00000538886 ARID3AQ99856 593 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 RGPD2P0DJD1 1756 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 WASHC4Q2M389 1173 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 BRIP1Q9BX63 1249 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 DBNDD1Q9H9R9 158 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 RAD21O60216 631 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 PCCAP05165 728 aaPredicted RBP10.73□□□□□ -0.69
GGA3-202ENST00000538886 PRPF40BQ6NWY9 871 aaKnown RBP10.73□□□□□ -0.69
GGA3-202ENST00000538886 MASTLQ96GX5 879 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 PUS3Q9BZE2 481 aaKnown RBP10.73□□□□□ -0.69
GGA3-202ENST00000538886 RNF181Q9P0P0 153 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 UBN2Q6ZU65 1347 aa10.73□□□□□ -0.69
GGA3-202ENST00000538886 PPEF1O14829 653 aaPredicted RBP10.72□□□□□ -0.69
GGA3-202ENST00000538886 APPP05067 770 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 PDIA4P13667 645 aaKnown RBP10.72□□□□□ -0.69
GGA3-202ENST00000538886 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 TOMM22Q9NS69 142 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 RAI14Q9P0K7 980 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 PLCH1Q4KWH8 1693 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 IDH1O75874 414 aaKnown RBP10.72□□□□□ -0.69
GGA3-202ENST00000538886 RAD17O75943 681 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 SLC4A8Q2Y0W8 1093 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
GGA3-202ENST00000538886 LRP2BPQ9P2M1 347 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 GGA1Q9UJY5 639 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 SAMD1Q6SPF0 538 aaPredicted RBP10.72□□□□□ -0.69
GGA3-202ENST00000538886 SKAP1Q86WV1 359 aa10.72□□□□□ -0.69
GGA3-202ENST00000538886 C16orf71Q8IYS4 520 aaPredicted RBP10.72□□□□□ -0.69
GGA3-202ENST00000538886 NPR1P16066 1061 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 EPHA10Q5JZY3 1008 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 FAM43AQ8N2R8 423 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 ZNF408Q9H9D4 720 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 BCL2L12Q9HB09 334 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.69
GGA3-202ENST00000538886 LRRC24Q50LG9 513 aa10.71□□□□□ -0.69
GGA3-202ENST00000538886 ZSCAN29Q8IWY8 852 aaPredicted RBP10.71□□□□□ -0.7
GGA3-202ENST00000538886 ARHGAP45Q92619 1136 aa10.71□□□□□ -0.7
GGA3-202ENST00000538886 NOL10Q9BSC4 688 aaKnown RBP10.71□□□□□ -0.7
GGA3-202ENST00000538886 BOLA2Q9H3K6 86 aa10.71□□□□□ -0.7
GGA3-202ENST00000538886 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 ATP2B3Q16720 1220 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 NIM1KQ8IY84 436 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 SLC5A1P13866 664 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 ZNF34Q8IZ26 560 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 TTLL11Q8NHH1 800 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 CHMP4CQ96CF2 233 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 LRRCC1Q9C099 1032 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 TAOK3Q9H2K8 898 aa10.7□□□□□ -0.7
GGA3-202ENST00000538886 FGD1P98174 961 aa10.69□□□□□ -0.7
GGA3-202ENST00000538886 TFCP2Q12800 502 aa10.69□□□□□ -0.7
GGA3-202ENST00000538886 DPY19L2Q6NUT2 758 aa10.69□□□□□ -0.7
GGA3-202ENST00000538886 GYG1P46976 350 aa10.69□□□□□ -0.7
GGA3-202ENST00000538886 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
GGA3-202ENST00000538886 TTLL12Q14166 644 aaPredicted RBP10.69□□□□□ -0.7
GGA3-202ENST00000538886 OGFOD1Q8N543 542 aa10.69□□□□□ -0.7
GGA3-202ENST00000538886 NAP1L2Q9ULW6 460 aaPredicted RBP10.69□□□□□ -0.7
GGA3-202ENST00000538886 NDUFB9Q9Y6M9 179 aa10.69□□□□□ -0.7
GGA3-202ENST00000538886 CCDC93Q567U6 631 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms