RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 PNMA8AQ86V59 439 aaPredicted RBP26.18■■□□□ 1.78
MSRB3-208ENST00000538725 NIM1KQ8IY84 436 aa26.18■■□□□ 1.78
MSRB3-208ENST00000538725 MPNDQ8N594 471 aa26.18■■□□□ 1.78
MSRB3-208ENST00000538725 SF3B3Q15393 1217 aaKnown RBP26.17■■□□□ 1.78
MSRB3-208ENST00000538725 DPP8Q6V1X1 898 aaPredicted RBP26.17■■□□□ 1.78
MSRB3-208ENST00000538725 TMC4Q7Z404 712 aa26.17■■□□□ 1.78
MSRB3-208ENST00000538725 CLEC11AQ9Y240 323 aa26.17■■□□□ 1.78
MSRB3-208ENST00000538725 PCNTO95613 3336 aa26.16■■□□□ 1.78
MSRB3-208ENST00000538725 ANP32CO43423 234 aa26.16■■□□□ 1.78
MSRB3-208ENST00000538725 AOC3Q16853 763 aa26.16■■□□□ 1.78
MSRB3-208ENST00000538725 WWC1Q8IX03 1113 aa26.16■■□□□ 1.78
MSRB3-208ENST00000538725 RNF216Q9NWF9 866 aaPredicted RBP26.16■■□□□ 1.78
MSRB3-208ENST00000538725 DDX60Q8IY21 1712 aaKnown RBP26.16■■□□□ 1.78
MSRB3-208ENST00000538725 TAF1P21675 1872 aa26.15■■□□□ 1.78
MSRB3-208ENST00000538725 RTL5Q5HYW3 569 aaPredicted RBP26.15■■□□□ 1.78
MSRB3-208ENST00000538725 TSPYL6Q8N831 410 aa26.15■■□□□ 1.78
MSRB3-208ENST00000538725 CREBZFQ9NS37 354 aa26.15■■□□□ 1.78
MSRB3-208ENST00000538725 IRS4O14654 1257 aaPredicted RBP26.14■■□□□ 1.78
MSRB3-208ENST00000538725 MRS2Q9HD23 443 aa26.14■■□□□ 1.78
MSRB3-208ENST00000538725 ITGBL1O95965 494 aaPredicted RBP26.13■■□□□ 1.77
MSRB3-208ENST00000538725 LMOD1P29536 600 aaPredicted RBP26.13■■□□□ 1.77
MSRB3-208ENST00000538725 HOXD11P31277 338 aaPredicted RBP26.13■■□□□ 1.77
MSRB3-208ENST00000538725 ZBTB38Q8NAP3 1195 aaPredicted RBP26.13■■□□□ 1.77
MSRB3-208ENST00000538725 TSR2Q969E8 191 aaKnown RBP26.13■■□□□ 1.77
MSRB3-208ENST00000538725 ZNRF3Q9ULT6 936 aa26.13■■□□□ 1.77
MSRB3-208ENST00000538725 PASKQ96RG2 1323 aa26.13■■□□□ 1.77
MSRB3-208ENST00000538725 DDX58O95786 925 aaKnown RBP26.12■■□□□ 1.77
MSRB3-208ENST00000538725 CCDC191Q8NCU4 936 aa26.12■■□□□ 1.77
MSRB3-208ENST00000538725 MYD88Q99836 296 aa26.12■■□□□ 1.77
MSRB3-208ENST00000538725 HSP90B1P14625 803 aaKnown RBP26.11■■□□□ 1.77
MSRB3-208ENST00000538725 KIAA2012Q0VF49 1180 aa26.11■■□□□ 1.77
MSRB3-208ENST00000538725 IFFO2Q5TF58 517 aa26.11■■□□□ 1.77
MSRB3-208ENST00000538725 SCNN1DP51172 638 aa26.1■■□□□ 1.77
MSRB3-208ENST00000538725 CELF1Q92879 486 aaKnown RBP26.1■■□□□ 1.77
MSRB3-208ENST00000538725 METTL22Q9BUU2 404 aaPredicted RBP26.1■■□□□ 1.77
MSRB3-208ENST00000538725 IL16Q14005 1332 aa26.1■■□□□ 1.77
MSRB3-208ENST00000538725 ADAMTSL1Q8N6G6 1762 aa26.1■■□□□ 1.77
MSRB3-208ENST00000538725 KCNA4P22459 653 aa26.09■■□□□ 1.77
MSRB3-208ENST00000538725 EPS15P42566 896 aa26.09■■□□□ 1.77
MSRB3-208ENST00000538725 CXCL9Q07325 125 aa26.09■■□□□ 1.77
MSRB3-208ENST00000538725 CNTROBQ8N137 903 aa26.09■■□□□ 1.77
MSRB3-208ENST00000538725 CWC25Q9NXE8 425 aaPredicted RBP26.08■■□□□ 1.77
MSRB3-208ENST00000538725 PCCAP05165 728 aaPredicted RBP26.07■■□□□ 1.76
MSRB3-208ENST00000538725 RPS8P62241 208 aaKnown RBP26.07■■□□□ 1.76
MSRB3-208ENST00000538725 MAP1SQ66K74 1059 aaPredicted RBP26.07■■□□□ 1.76
MSRB3-208ENST00000538725 STK31Q9BXU1 1019 aa26.07■■□□□ 1.76
MSRB3-208ENST00000538725 NSFL1CQ9UNZ2 370 aaKnown RBP26.07■■□□□ 1.76
MSRB3-208ENST00000538725 LTBP1Q14766 1721 aa26.06■■□□□ 1.76
MSRB3-208ENST00000538725 TWISTNBQ3B726 338 aaPredicted RBP26.06■■□□□ 1.76
MSRB3-208ENST00000538725 KSR2Q6VAB6 950 aa26.06■■□□□ 1.76
MSRB3-208ENST00000538725 USP50Q70EL3 339 aaPredicted RBP26.06■■□□□ 1.76
MSRB3-208ENST00000538725 MAP3K2Q9Y2U5 619 aa26.06■■□□□ 1.76
MSRB3-208ENST00000538725 TMEM88BA6NKF7 163 aa26.05■■□□□ 1.76
MSRB3-208ENST00000538725 CIAPIN1Q6FI81 312 aa26.05■■□□□ 1.76
MSRB3-208ENST00000538725 LRRC37AA6NMS7 1700 aa26.05■■□□□ 1.76
MSRB3-208ENST00000538725 PI4KAP2A4QPH2 592 aa26.04■■□□□ 1.76
MSRB3-208ENST00000538725 PDE8AO60658 829 aa26.04■■□□□ 1.76
MSRB3-208ENST00000538725 TNIP1Q15025 636 aa26.04■■□□□ 1.76
MSRB3-208ENST00000538725 WASHC4Q2M389 1173 aa26.04■■□□□ 1.76
MSRB3-208ENST00000538725 PI4KAP1Q8N8J0 262 aa26.04■■□□□ 1.76
MSRB3-208ENST00000538725 GPRC5DQ9NZD1 345 aa26.04■■□□□ 1.76
MSRB3-208ENST00000538725 MKRN1Q9UHC7 482 aaKnown RBP26.04■■□□□ 1.76
MSRB3-208ENST00000538725 JARID2Q92833 1246 aaPredicted RBP26.03■■□□□ 1.76
MSRB3-208ENST00000538725 ADARB2Q9NS39 739 aaKnown RBP26.03■■□□□ 1.76
MSRB3-208ENST00000538725 RAD17O75943 681 aa26.02■■□□□ 1.76
MSRB3-208ENST00000538725 SLC4A2P04920 1241 aa26.02■■□□□ 1.76
MSRB3-208ENST00000538725 GPSM2P81274 684 aa26.02■■□□□ 1.76
MSRB3-208ENST00000538725 CCDC152Q4G0S7 254 aa26.02■■□□□ 1.76
MSRB3-208ENST00000538725 WDR63Q8IWG1 891 aa26.02■■□□□ 1.76
MSRB3-208ENST00000538725 SEC31BQ9NQW1 1179 aa26.02■■□□□ 1.76
MSRB3-208ENST00000538725 SALL2Q9Y467 1007 aaPredicted RBP26.02■■□□□ 1.76
MSRB3-208ENST00000538725 C6orf229H3BNL8 230 aa26.01■■□□□ 1.75
MSRB3-208ENST00000538725 GMPSP49915 693 aaPredicted RBP26.01■■□□□ 1.75
MSRB3-208ENST00000538725 NEXNQ0ZGT2 675 aa26.01■■□□□ 1.75
MSRB3-208ENST00000538725 DUOX1Q9NRD9 1551 aa26.01■■□□□ 1.75
MSRB3-208ENST00000538725 POLLQ9UGP5 575 aa26.01■■□□□ 1.75
MSRB3-208ENST00000538725 YDJCA8MPS7 323 aa26■■□□□ 1.75
MSRB3-208ENST00000538725 IGKV5-2P06315 115 aa26■■□□□ 1.75
MSRB3-208ENST00000538725 BCL2L13Q9BXK5 485 aa26■■□□□ 1.75
MSRB3-208ENST00000538725 COL4A1P02462 1669 aa25.99■■□□□ 1.75
MSRB3-208ENST00000538725 CNTNAP1P78357 1384 aa25.99■■□□□ 1.75
MSRB3-208ENST00000538725 CDHR2Q9BYE9 1310 aa25.99■■□□□ 1.75
MSRB3-208ENST00000538725 RIMBP2O15034 1052 aa25.99■■□□□ 1.75
MSRB3-208ENST00000538725 G2E3Q7L622 706 aa25.99■■□□□ 1.75
MSRB3-208ENST00000538725 EYA3Q99504 573 aa25.99■■□□□ 1.75
MSRB3-208ENST00000538725 HSPA1AP0DMV8 641 aaKnown RBP25.98■■□□□ 1.75
MSRB3-208ENST00000538725 HSPA1BP0DMV9 641 aaKnown RBP25.98■■□□□ 1.75
MSRB3-208ENST00000538725 TBC1D16Q8TBP0 767 aa25.98■■□□□ 1.75
MSRB3-208ENST00000538725 PODXL2Q9NZ53 605 aa25.98■■□□□ 1.75
MSRB3-208ENST00000538725 FANCIQ9NVI1 1328 aa25.97■■□□□ 1.75
MSRB3-208ENST00000538725 NPM3O75607 178 aaKnown RBP25.97■■□□□ 1.75
MSRB3-208ENST00000538725 CCDC85AQ96PX6 553 aaPredicted RBP25.96■■□□□ 1.75
MSRB3-208ENST00000538725 DBNDD1Q9H9R9 158 aa25.96■■□□□ 1.75
MSRB3-208ENST00000538725 NEURL1BA8MQ27 555 aa25.95■■□□□ 1.74
MSRB3-208ENST00000538725 VAMP4O75379 141 aa25.95■■□□□ 1.74
MSRB3-208ENST00000538725 CWF19L2Q2TBE0 894 aaKnown RBP25.95■■□□□ 1.74
MSRB3-208ENST00000538725 ZC3H12CQ9C0D7 883 aaKnown RBP25.95■■□□□ 1.74
MSRB3-208ENST00000538725 ANKIB1Q9P2G1 1089 aa25.95■■□□□ 1.74
MSRB3-208ENST00000538725 CNOT7Q9UIV1 285 aaKnown RBP25.95■■□□□ 1.74
MSRB3-208ENST00000538725 FLIIQ13045 1269 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms