RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 NFIXQ14938 502 aa25.59■■□□□ 1.69
COPS7A-208ENST00000538410 TBC1D9BQ66K14 1250 aa25.59■■□□□ 1.69
COPS7A-208ENST00000538410 ZNF784Q8NCA9 323 aaPredicted RBP25.59■■□□□ 1.69
COPS7A-208ENST00000538410 UTP14AQ9BVJ6 771 aaKnown RBP25.58■■□□□ 1.69
COPS7A-208ENST00000538410 DPEP1P16444 411 aa25.57■■□□□ 1.68
COPS7A-208ENST00000538410 PLA2G12BQ9BX93 195 aa25.57■■□□□ 1.68
COPS7A-208ENST00000538410 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
COPS7A-208ENST00000538410 NTSR2O95665 410 aa25.55■■□□□ 1.68
COPS7A-208ENST00000538410 SYNE4Q8N205 404 aa25.55■■□□□ 1.68
COPS7A-208ENST00000538410 SH3TC1Q8TE82 1336 aa25.55■■□□□ 1.68
COPS7A-208ENST00000538410 FAM177BA6PVY3 158 aa25.55■■□□□ 1.68
COPS7A-208ENST00000538410 BICDL1Q6ZP65 573 aa25.55■■□□□ 1.68
COPS7A-208ENST00000538410 SETDB2Q96T68 719 aa25.55■■□□□ 1.68
COPS7A-208ENST00000538410 BRCA1P38398 1863 aaKnown RBP25.55■■□□□ 1.68
COPS7A-208ENST00000538410 SERPINB2P05120 415 aa25.54■■□□□ 1.68
COPS7A-208ENST00000538410 LMBR1LQ6UX01 489 aa25.54■■□□□ 1.68
COPS7A-208ENST00000538410 BCS1LQ9Y276 419 aa25.54■■□□□ 1.68
COPS7A-208ENST00000538410 NRXN2Q9P2S2 1712 aa25.53■■□□□ 1.68
COPS7A-208ENST00000538410 IRS4O14654 1257 aaPredicted RBP25.53■■□□□ 1.68
COPS7A-208ENST00000538410 NUCB1Q02818 461 aa25.53■■□□□ 1.68
COPS7A-208ENST00000538410 ANKRD45Q5TZF3 282 aa25.52■■□□□ 1.68
COPS7A-208ENST00000538410 EXOC6BQ9Y2D4 811 aa25.52■■□□□ 1.68
COPS7A-208ENST00000538410 PDE8AO60658 829 aa25.51■■□□□ 1.67
COPS7A-208ENST00000538410 KCNA3P22001 575 aa25.51■■□□□ 1.67
COPS7A-208ENST00000538410 SKAP1Q86WV1 359 aa25.51■■□□□ 1.67
COPS7A-208ENST00000538410 NYXQ9GZU5 481 aa25.51■■□□□ 1.67
COPS7A-208ENST00000538410 SURF6O75683 361 aaKnown RBP25.5■■□□□ 1.67
COPS7A-208ENST00000538410 CSF1RP07333 972 aa25.5■■□□□ 1.67
COPS7A-208ENST00000538410 PIM2Q9P1W9 311 aa25.5■■□□□ 1.67
COPS7A-208ENST00000538410 NOP58Q9Y2X3 529 aaKnown RBP25.5■■□□□ 1.67
COPS7A-208ENST00000538410 CARMIL3Q8ND23 1372 aa25.49■■□□□ 1.67
COPS7A-208ENST00000538410 CHD1LQ86WJ1 897 aa25.49■■□□□ 1.67
COPS7A-208ENST00000538410 NUTM1Q86Y26 1132 aa25.49■■□□□ 1.67
COPS7A-208ENST00000538410 HSP90B1P14625 803 aaKnown RBP25.48■■□□□ 1.67
COPS7A-208ENST00000538410 RFX5P48382 616 aaPredicted RBP25.48■■□□□ 1.67
COPS7A-208ENST00000538410 CHMP3Q9Y3E7 222 aa25.48■■□□□ 1.67
COPS7A-208ENST00000538410 CHRNA5P30532 468 aa25.48■■□□□ 1.67
COPS7A-208ENST00000538410 CTSWP56202 376 aa25.48■■□□□ 1.67
COPS7A-208ENST00000538410 PA2G4Q9UQ80 394 aaKnown RBP25.48■■□□□ 1.67
COPS7A-208ENST00000538410 ARFGEF1Q9Y6D6 1849 aa25.47■■□□□ 1.67
COPS7A-208ENST00000538410 RAB11FIP3O75154 756 aa25.47■■□□□ 1.67
COPS7A-208ENST00000538410 HCLS1P14317 486 aaPredicted RBP25.47■■□□□ 1.67
COPS7A-208ENST00000538410 ERFEQ4G0M1 354 aa25.47■■□□□ 1.67
COPS7A-208ENST00000538410 HSP90AB4PQ58FF6 505 aa25.47■■□□□ 1.67
COPS7A-208ENST00000538410 NBPF5PQ86XG9 351 aaPredicted RBP25.47■■□□□ 1.67
COPS7A-208ENST00000538410 TTLL11Q8NHH1 800 aa25.47■■□□□ 1.67
COPS7A-208ENST00000538410 LNPKQ9C0E8 428 aa25.47■■□□□ 1.67
COPS7A-208ENST00000538410 COPRSQ9NQ92 184 aa25.47■■□□□ 1.67
COPS7A-208ENST00000538410 APBB1O00213 710 aa25.46■■□□□ 1.67
COPS7A-208ENST00000538410 TPTE2Q6XPS3 522 aa25.46■■□□□ 1.67
COPS7A-208ENST00000538410 GTF2E1P29083 439 aaPredicted RBP25.45■■□□□ 1.67
COPS7A-208ENST00000538410 PTPN12Q05209 780 aaKnown RBP25.45■■□□□ 1.67
COPS7A-208ENST00000538410 DALRD3Q5D0E6 543 aaKnown RBP25.45■■□□□ 1.67
COPS7A-208ENST00000538410 ZBTB47Q9UFB7 747 aaPredicted RBP25.45■■□□□ 1.67
COPS7A-208ENST00000538410 RGS3P49796 1198 aa25.45■■□□□ 1.66
COPS7A-208ENST00000538410 SLC10A5Q5PT55 438 aa25.45■■□□□ 1.66
COPS7A-208ENST00000538410 KLHDC4Q8TBB5 520 aa25.45■■□□□ 1.66
COPS7A-208ENST00000538410 LRRCC1Q9C099 1032 aa25.45■■□□□ 1.66
COPS7A-208ENST00000538410 PDE4AP27815 886 aa25.44■■□□□ 1.66
COPS7A-208ENST00000538410 ARHGAP27Q6ZUM4 889 aa25.44■■□□□ 1.66
COPS7A-208ENST00000538410 SMARCA5O60264 1052 aaPredicted RBP25.43■■□□□ 1.66
COPS7A-208ENST00000538410 G3BP1Q13283 466 aaKnown RBP eCLIP25.43■■□□□ 1.66
COPS7A-208ENST00000538410 CCDC57Q2TAC2 916 aa25.43■■□□□ 1.66
COPS7A-208ENST00000538410 FAM161AQ3B820 660 aa25.43■■□□□ 1.66
COPS7A-208ENST00000538410 ABCC12Q96J65 1359 aa25.43■■□□□ 1.66
COPS7A-208ENST00000538410 OS9Q13438 667 aaPredicted RBP25.42■■□□□ 1.66
COPS7A-208ENST00000538410 CCDC85AQ96PX6 553 aaPredicted RBP25.42■■□□□ 1.66
COPS7A-208ENST00000538410 DLEC1Q9Y238 1755 aa25.42■■□□□ 1.66
COPS7A-208ENST00000538410 IFIT5Q13325 482 aaKnown RBP25.41■■□□□ 1.66
COPS7A-208ENST00000538410 ERC1Q8IUD2 1116 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 RHPN1Q8TCX5 695 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 KIF1BPQ96EK5 621 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 GREM2Q9H772 168 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 SPEF2Q9C093 1822 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 TNRC6CQ9HCJ0 1690 aaKnown RBP25.41■■□□□ 1.66
COPS7A-208ENST00000538410 NPHP1O15259 732 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 PRR5LQ6MZQ0 368 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 C2CD5Q86YS7 1000 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 SIL1Q9H173 461 aa25.41■■□□□ 1.66
COPS7A-208ENST00000538410 ANKRD31Q8N7Z5 1873 aa25.4■■□□□ 1.66
COPS7A-208ENST00000538410 H0YIN7 160 aa25.4■■□□□ 1.66
COPS7A-208ENST00000538410 ITGA6P23229 1130 aa25.4■■□□□ 1.66
COPS7A-208ENST00000538410 CNBD1Q8NA66 436 aa25.4■■□□□ 1.66
COPS7A-208ENST00000538410 RTL9Q8NET4 1388 aa25.39■■□□□ 1.66
COPS7A-208ENST00000538410 CCDC152Q4G0S7 254 aa25.39■■□□□ 1.66
COPS7A-208ENST00000538410 BRIP1Q9BX63 1249 aa25.39■■□□□ 1.66
COPS7A-208ENST00000538410 ANKRD18BA2A2Z9 1011 aa25.38■■□□□ 1.65
COPS7A-208ENST00000538410 ZNF594Q96JF6 807 aaPredicted RBP25.38■■□□□ 1.65
COPS7A-208ENST00000538410 RIC1Q4ADV7 1423 aa25.38■■□□□ 1.65
COPS7A-208ENST00000538410 TAF1P21675 1872 aa25.38■■□□□ 1.65
COPS7A-208ENST00000538410 SASH1O94885 1247 aa25.37■■□□□ 1.65
COPS7A-208ENST00000538410 PDE6BP35913 854 aa25.37■■□□□ 1.65
COPS7A-208ENST00000538410 SF3B3Q15393 1217 aaKnown RBP25.37■■□□□ 1.65
COPS7A-208ENST00000538410 CCDC24Q8N4L8 307 aa25.37■■□□□ 1.65
COPS7A-208ENST00000538410 ST5P78524 1137 aa25.37■■□□□ 1.65
COPS7A-208ENST00000538410 C16orf71Q8IYS4 520 aaPredicted RBP25.37■■□□□ 1.65
COPS7A-208ENST00000538410 NLRP3Q96P20 1036 aa25.37■■□□□ 1.65
COPS7A-208ENST00000538410 TAF7LQ5H9L4 462 aa25.36■■□□□ 1.65
COPS7A-208ENST00000538410 C3orf67Q6ZVT6 689 aa25.36■■□□□ 1.65
COPS7A-208ENST00000538410 IL1RAPL2Q9NP60 686 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms