RNA–Protein interactions for RNA: ENST00000538354.5

TULP3-203, Transcript of tubby like protein 3, humanhuman

TSL 1 (best)

Gene TULP3, Length 1,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-203ENST00000538354 ISCA1Q9BUE6 129 aa25.27■■□□□ 1.64
TULP3-203ENST00000538354 IFT57Q9NWB7 429 aa25.27■■□□□ 1.64
TULP3-203ENST00000538354 EPS15P42566 896 aa25.26■■□□□ 1.63
TULP3-203ENST00000538354 SCNN1DP51172 638 aa25.26■■□□□ 1.63
TULP3-203ENST00000538354 WWC1Q8IX03 1113 aa25.26■■□□□ 1.63
TULP3-203ENST00000538354 GNAI1P63096 354 aa25.25■■□□□ 1.63
TULP3-203ENST00000538354 GRAPQ13588 217 aa25.25■■□□□ 1.63
TULP3-203ENST00000538354 DPP8Q6V1X1 898 aaPredicted RBP25.25■■□□□ 1.63
TULP3-203ENST00000538354 PNMA8AQ86V59 439 aaPredicted RBP25.25■■□□□ 1.63
TULP3-203ENST00000538354 SP8Q8IXZ3 490 aa25.25■■□□□ 1.63
TULP3-203ENST00000538354 GRAPLQ8TC17 118 aaPredicted RBP25.25■■□□□ 1.63
TULP3-203ENST00000538354 PHAXQ9H814 394 aaKnown RBP25.25■■□□□ 1.63
TULP3-203ENST00000538354 HYPKQ9NX55 129 aa25.25■■□□□ 1.63
TULP3-203ENST00000538354 COL4A1P02462 1669 aa25.25■■□□□ 1.63
TULP3-203ENST00000538354 BBOX1O75936 387 aa25.24■■□□□ 1.63
TULP3-203ENST00000538354 LMOD1P29536 600 aaPredicted RBP25.24■■□□□ 1.63
TULP3-203ENST00000538354 CNTROBQ8N137 903 aa25.24■■□□□ 1.63
TULP3-203ENST00000538354 MPNDQ8N594 471 aa25.24■■□□□ 1.63
TULP3-203ENST00000538354 RTFDC1Q9BY42 306 aaPredicted RBP25.23■■□□□ 1.63
TULP3-203ENST00000538354 TMEM88BA6NKF7 163 aa25.22■■□□□ 1.63
TULP3-203ENST00000538354 C8orf58Q8NAV2 365 aa25.22■■□□□ 1.63
TULP3-203ENST00000538354 CNTNAP1P78357 1384 aa25.21■■□□□ 1.63
TULP3-203ENST00000538354 FMR1Q06787 632 aaKnown RBP eCLIP25.21■■□□□ 1.63
TULP3-203ENST00000538354 CXCL9Q07325 125 aa25.21■■□□□ 1.63
TULP3-203ENST00000538354 SUPT20HQ8NEM7 779 aa25.21■■□□□ 1.63
TULP3-203ENST00000538354 DUOX1Q9NRD9 1551 aa25.21■■□□□ 1.63
TULP3-203ENST00000538354 IL16Q14005 1332 aa25.2■■□□□ 1.62
TULP3-203ENST00000538354 RIC3Q7Z5B4 369 aa25.2■■□□□ 1.62
TULP3-203ENST00000538354 CELF1Q92879 486 aaKnown RBP25.2■■□□□ 1.62
TULP3-203ENST00000538354 LRRC37AA6NMS7 1700 aa25.2■■□□□ 1.62
TULP3-203ENST00000538354 ZNRF3Q9ULT6 936 aa25.19■■□□□ 1.62
TULP3-203ENST00000538354 IRS4O14654 1257 aaPredicted RBP25.18■■□□□ 1.62
TULP3-203ENST00000538354 RAD17O75943 681 aa25.18■■□□□ 1.62
TULP3-203ENST00000538354 GOLGA2Q08379 1002 aa25.18■■□□□ 1.62
TULP3-203ENST00000538354 KIAA2012Q0VF49 1180 aa25.18■■□□□ 1.62
TULP3-203ENST00000538354 MYD88Q99836 296 aa25.18■■□□□ 1.62
TULP3-203ENST00000538354 VEGFBP49765 207 aa25.17■■□□□ 1.62
TULP3-203ENST00000538354 GMPSP49915 693 aaPredicted RBP25.17■■□□□ 1.62
TULP3-203ENST00000538354 SF3B3Q15393 1217 aaKnown RBP25.17■■□□□ 1.62
TULP3-203ENST00000538354 WDR63Q8IWG1 891 aa25.17■■□□□ 1.62
TULP3-203ENST00000538354 TSPYL6Q8N831 410 aa25.17■■□□□ 1.62
TULP3-203ENST00000538354 JARID2Q92833 1246 aaPredicted RBP25.17■■□□□ 1.62
TULP3-203ENST00000538354 VPS33BQ9H267 617 aa25.17■■□□□ 1.62
TULP3-203ENST00000538354 MIER1Q8N108 512 aa25.16■■□□□ 1.62
TULP3-203ENST00000538354 TSR2Q969E8 191 aaKnown RBP25.16■■□□□ 1.62
TULP3-203ENST00000538354 GPRC5DQ9NZD1 345 aa25.16■■□□□ 1.62
TULP3-203ENST00000538354 YDJCA8MPS7 323 aa25.15■■□□□ 1.62
TULP3-203ENST00000538354 CIAPIN1Q6FI81 312 aa25.15■■□□□ 1.62
TULP3-203ENST00000538354 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
TULP3-203ENST00000538354 TRAF5O00463 557 aa25.14■■□□□ 1.62
TULP3-203ENST00000538354 TRIM28Q13263 835 aaKnown RBP25.14■■□□□ 1.62
TULP3-203ENST00000538354 USP50Q70EL3 339 aaPredicted RBP25.14■■□□□ 1.62
TULP3-203ENST00000538354 NSFL1CQ9UNZ2 370 aaKnown RBP25.14■■□□□ 1.62
TULP3-203ENST00000538354 RIMBP2O15034 1052 aa25.13■■□□□ 1.61
TULP3-203ENST00000538354 GPSM2P81274 684 aa25.13■■□□□ 1.61
TULP3-203ENST00000538354 TMC4Q7Z404 712 aa25.13■■□□□ 1.61
TULP3-203ENST00000538354 TNS4Q8IZW8 715 aa25.13■■□□□ 1.61
TULP3-203ENST00000538354 GPR101Q96P66 508 aaPredicted RBP25.13■■□□□ 1.61
TULP3-203ENST00000538354 SHTN1A0MZ66 631 aa25.12■■□□□ 1.61
TULP3-203ENST00000538354 ZBTB38Q8NAP3 1195 aaPredicted RBP25.12■■□□□ 1.61
TULP3-203ENST00000538354 CCDC85AQ96PX6 553 aaPredicted RBP25.12■■□□□ 1.61
TULP3-203ENST00000538354 SEC31BQ9NQW1 1179 aa25.12■■□□□ 1.61
TULP3-203ENST00000538354 ADARB2Q9NS39 739 aaKnown RBP25.12■■□□□ 1.61
TULP3-203ENST00000538354 ABT1Q9ULW3 272 aaKnown RBP25.12■■□□□ 1.61
TULP3-203ENST00000538354 C6orf229H3BNL8 230 aa25.11■■□□□ 1.61
TULP3-203ENST00000538354 CAPN15O75808 1086 aa25.11■■□□□ 1.61
TULP3-203ENST00000538354 BCL2L13Q9BXK5 485 aa25.11■■□□□ 1.61
TULP3-203ENST00000538354 DBNDD1Q9H9R9 158 aa25.11■■□□□ 1.61
TULP3-203ENST00000538354 POLLQ9UGP5 575 aa25.11■■□□□ 1.61
TULP3-203ENST00000538354 TRPM7Q96QT4 1865 aa25.11■■□□□ 1.61
TULP3-203ENST00000538354 FOXN1O15353 648 aa25.1■■□□□ 1.61
TULP3-203ENST00000538354 DEFB115Q30KQ5 88 aa25.1■■□□□ 1.61
TULP3-203ENST00000538354 CCDC30Q5VVM6 783 aa25.1■■□□□ 1.61
TULP3-203ENST00000538354 RASSF10A6NK89 507 aa25.09■■□□□ 1.61
TULP3-203ENST00000538354 WASHC4Q2M389 1173 aa25.09■■□□□ 1.61
TULP3-203ENST00000538354 METTL22Q9BUU2 404 aaPredicted RBP25.09■■□□□ 1.61
TULP3-203ENST00000538354 ZNF521Q96K83 1311 aa25.09■■□□□ 1.61
TULP3-203ENST00000538354 RPS8P62241 208 aaKnown RBP25.08■■□□□ 1.61
TULP3-203ENST00000538354 TNIP1Q15025 636 aa25.08■■□□□ 1.61
TULP3-203ENST00000538354 DOK7Q18PE1 504 aa25.08■■□□□ 1.61
TULP3-203ENST00000538354 TRPM4Q8TD43 1214 aa25.08■■□□□ 1.61
TULP3-203ENST00000538354 CWC25Q9NXE8 425 aaPredicted RBP25.08■■□□□ 1.61
TULP3-203ENST00000538354 MAP3K2Q9Y2U5 619 aa25.08■■□□□ 1.61
TULP3-203ENST00000538354 ZBTB12Q9Y330 459 aaPredicted RBP25.08■■□□□ 1.61
TULP3-203ENST00000538354 PCCAP05165 728 aaPredicted RBP25.07■■□□□ 1.6
TULP3-203ENST00000538354 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
TULP3-203ENST00000538354 CCDC191Q8NCU4 936 aa25.07■■□□□ 1.6
TULP3-203ENST00000538354 CHMP4AQ9BY43 222 aa25.07■■□□□ 1.6
TULP3-203ENST00000538354 KCNQ5Q9NR82 932 aa25.07■■□□□ 1.6
TULP3-203ENST00000538354 PSMD14O00487 310 aa25.06■■□□□ 1.6
TULP3-203ENST00000538354 CST9Q5W186 159 aa25.06■■□□□ 1.6
TULP3-203ENST00000538354 GLIS2Q9BZE0 524 aaPredicted RBP25.06■■□□□ 1.6
TULP3-203ENST00000538354 CNOT7Q9UIV1 285 aaKnown RBP25.06■■□□□ 1.6
TULP3-203ENST00000538354 FANCIQ9NVI1 1328 aa25.06■■□□□ 1.6
TULP3-203ENST00000538354 DDX58O95786 925 aaKnown RBP25.05■■□□□ 1.6
TULP3-203ENST00000538354 GRM1Q13255 1194 aa25.05■■□□□ 1.6
TULP3-203ENST00000538354 PAXIP1Q6ZW49 1069 aaPredicted RBP25.05■■□□□ 1.6
TULP3-203ENST00000538354 G2E3Q7L622 706 aa25.05■■□□□ 1.6
TULP3-203ENST00000538354 TBC1D16Q8TBP0 767 aa25.05■■□□□ 1.6
TULP3-203ENST00000538354 WDR33Q9C0J8 1336 aaKnown RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms