RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZNRF3Q9ULT6 936 aa25.56■■□□□ 1.68
TNFRSF1B-204ENST00000536782 TRPM7Q96QT4 1865 aa25.55■■□□□ 1.68
TNFRSF1B-204ENST00000536782 USP50Q70EL3 339 aaPredicted RBP25.55■■□□□ 1.68
TNFRSF1B-204ENST00000536782 ISCA1Q9BUE6 129 aa25.55■■□□□ 1.68
TNFRSF1B-204ENST00000536782 APAF1O14727 1248 aa25.54■■□□□ 1.68
TNFRSF1B-204ENST00000536782 CAPN15O75808 1086 aa25.54■■□□□ 1.68
TNFRSF1B-204ENST00000536782 ZNF853P0CG23 659 aa25.54■■□□□ 1.68
TNFRSF1B-204ENST00000536782 VEGFBP49765 207 aa25.54■■□□□ 1.68
TNFRSF1B-204ENST00000536782 TMC4Q7Z404 712 aa25.54■■□□□ 1.68
TNFRSF1B-204ENST00000536782 ATP5J2-PTCD1G3V325 749 aa25.53■■□□□ 1.68
TNFRSF1B-204ENST00000536782 CALD1Q05682 793 aaKnown RBP25.53■■□□□ 1.68
TNFRSF1B-204ENST00000536782 CXCL9Q07325 125 aa25.53■■□□□ 1.68
TNFRSF1B-204ENST00000536782 KIAA2012Q0VF49 1180 aa25.53■■□□□ 1.68
TNFRSF1B-204ENST00000536782 FAM89AQ96GI7 184 aa25.53■■□□□ 1.68
TNFRSF1B-204ENST00000536782 IFT57Q9NWB7 429 aa25.53■■□□□ 1.68
TNFRSF1B-204ENST00000536782 DDX60Q8IY21 1712 aaKnown RBP25.52■■□□□ 1.68
TNFRSF1B-204ENST00000536782 FOXN1O15353 648 aa25.52■■□□□ 1.68
TNFRSF1B-204ENST00000536782 GNAI1P63096 354 aa25.52■■□□□ 1.68
TNFRSF1B-204ENST00000536782 GPRC5DQ9NZD1 345 aa25.51■■□□□ 1.67
TNFRSF1B-204ENST00000536782 RASSF10A6NK89 507 aa25.5■■□□□ 1.67
TNFRSF1B-204ENST00000536782 SF3B3Q15393 1217 aaKnown RBP25.5■■□□□ 1.67
TNFRSF1B-204ENST00000536782 DEFB115Q30KQ5 88 aa25.5■■□□□ 1.67
TNFRSF1B-204ENST00000536782 ADARB2Q9NS39 739 aaKnown RBP25.5■■□□□ 1.67
TNFRSF1B-204ENST00000536782 FMR1Q06787 632 aaKnown RBP eCLIP25.49■■□□□ 1.67
TNFRSF1B-204ENST00000536782 TRIM28Q13263 835 aaKnown RBP25.49■■□□□ 1.67
TNFRSF1B-204ENST00000536782 CIAPIN1Q6FI81 312 aa25.49■■□□□ 1.67
TNFRSF1B-204ENST00000536782 RIC3Q7Z5B4 369 aa25.49■■□□□ 1.67
TNFRSF1B-204ENST00000536782 ELL2O00472 640 aaPredicted RBP25.48■■□□□ 1.67
TNFRSF1B-204ENST00000536782 GOLGA2Q08379 1002 aa25.48■■□□□ 1.67
TNFRSF1B-204ENST00000536782 RTL5Q5HYW3 569 aaPredicted RBP25.48■■□□□ 1.67
TNFRSF1B-204ENST00000536782 ABT1Q9ULW3 272 aaKnown RBP25.48■■□□□ 1.67
TNFRSF1B-204ENST00000536782 LRRC37AA6NMS7 1700 aa25.48■■□□□ 1.67
TNFRSF1B-204ENST00000536782 GMPSP49915 693 aaPredicted RBP25.47■■□□□ 1.67
TNFRSF1B-204ENST00000536782 TNIP1Q15025 636 aa25.47■■□□□ 1.67
TNFRSF1B-204ENST00000536782 CELF1Q92879 486 aaKnown RBP25.47■■□□□ 1.67
TNFRSF1B-204ENST00000536782 COL4A1P02462 1669 aa25.46■■□□□ 1.67
TNFRSF1B-204ENST00000536782 IRS4O14654 1257 aaPredicted RBP25.46■■□□□ 1.67
TNFRSF1B-204ENST00000536782 RAD17O75943 681 aa25.46■■□□□ 1.67
TNFRSF1B-204ENST00000536782 AIDAQ96BJ3 306 aa25.46■■□□□ 1.67
TNFRSF1B-204ENST00000536782 BCL2L13Q9BXK5 485 aa25.46■■□□□ 1.67
TNFRSF1B-204ENST00000536782 PHAXQ9H814 394 aaKnown RBP25.46■■□□□ 1.67
TNFRSF1B-204ENST00000536782 DUOX1Q9NRD9 1551 aa25.46■■□□□ 1.67
TNFRSF1B-204ENST00000536782 THSD7BQ9C0I4 1608 aa25.45■■□□□ 1.67
TNFRSF1B-204ENST00000536782 CDHR2Q9BYE9 1310 aa25.45■■□□□ 1.66
TNFRSF1B-204ENST00000536782 WBP1LQ9NX94 342 aa25.45■■□□□ 1.66
TNFRSF1B-204ENST00000536782 NSFL1CQ9UNZ2 370 aaKnown RBP25.45■■□□□ 1.66
TNFRSF1B-204ENST00000536782 YDJCA8MPS7 323 aa25.43■■□□□ 1.66
TNFRSF1B-204ENST00000536782 HSP90B1P14625 803 aaKnown RBP25.43■■□□□ 1.66
TNFRSF1B-204ENST00000536782 WASHC4Q2M389 1173 aa25.43■■□□□ 1.66
TNFRSF1B-204ENST00000536782 ZBTB38Q8NAP3 1195 aaPredicted RBP25.43■■□□□ 1.66
TNFRSF1B-204ENST00000536782 C8orf58Q8NAV2 365 aa25.43■■□□□ 1.66
TNFRSF1B-204ENST00000536782 CHMP4AQ9BY43 222 aa25.43■■□□□ 1.66
TNFRSF1B-204ENST00000536782 WDR33Q9C0J8 1336 aaKnown RBP25.42■■□□□ 1.66
TNFRSF1B-204ENST00000536782 TRAF5O00463 557 aa25.42■■□□□ 1.66
TNFRSF1B-204ENST00000536782 MYD88Q99836 296 aa25.42■■□□□ 1.66
TNFRSF1B-204ENST00000536782 PRDM10Q9NQV6 1147 aa25.42■■□□□ 1.66
TNFRSF1B-204ENST00000536782 C6orf229H3BNL8 230 aa25.41■■□□□ 1.66
TNFRSF1B-204ENST00000536782 CTCFP49711 727 aaPredicted RBP25.41■■□□□ 1.66
TNFRSF1B-204ENST00000536782 RPS8P62241 208 aaKnown RBP25.41■■□□□ 1.66
TNFRSF1B-204ENST00000536782 CCDC30Q5VVM6 783 aa25.41■■□□□ 1.66
TNFRSF1B-204ENST00000536782 CST9Q5W186 159 aa25.41■■□□□ 1.66
TNFRSF1B-204ENST00000536782 POLR2AP24928 1970 aaKnown RBP25.4■■□□□ 1.66
TNFRSF1B-204ENST00000536782 GPSM2P81274 684 aa25.4■■□□□ 1.66
TNFRSF1B-204ENST00000536782 CCDC191Q8NCU4 936 aa25.4■■□□□ 1.66
TNFRSF1B-204ENST00000536782 RIMBP2O15034 1052 aa25.39■■□□□ 1.66
TNFRSF1B-204ENST00000536782 DDX58O95786 925 aaKnown RBP25.39■■□□□ 1.66
TNFRSF1B-204ENST00000536782 ZC3H15Q8WU90 426 aaKnown RBP25.39■■□□□ 1.66
TNFRSF1B-204ENST00000536782 EYA3Q99504 573 aa25.39■■□□□ 1.66
TNFRSF1B-204ENST00000536782 POLLQ9UGP5 575 aa25.39■■□□□ 1.66
TNFRSF1B-204ENST00000536782 PGAP2Q9UHJ9 254 aa25.39■■□□□ 1.66
TNFRSF1B-204ENST00000536782 CNOT7Q9UIV1 285 aaKnown RBP25.39■■□□□ 1.66
TNFRSF1B-204ENST00000536782 H7C1D1 291 aa25.38■■□□□ 1.65
TNFRSF1B-204ENST00000536782 MAP2K1Q02750 393 aaPredicted RBP25.38■■□□□ 1.65
TNFRSF1B-204ENST00000536782 PAXIP1Q6ZW49 1069 aaPredicted RBP25.38■■□□□ 1.65
TNFRSF1B-204ENST00000536782 DBNDD1Q9H9R9 158 aa25.38■■□□□ 1.65
TNFRSF1B-204ENST00000536782 PCCAP05165 728 aaPredicted RBP25.37■■□□□ 1.65
TNFRSF1B-204ENST00000536782 ECE1P42892 770 aa25.37■■□□□ 1.65
TNFRSF1B-204ENST00000536782 HIRAP54198 1017 aaPredicted RBP25.37■■□□□ 1.65
TNFRSF1B-204ENST00000536782 METTL22Q9BUU2 404 aaPredicted RBP25.37■■□□□ 1.65
TNFRSF1B-204ENST00000536782 CWC25Q9NXE8 425 aaPredicted RBP25.37■■□□□ 1.65
TNFRSF1B-204ENST00000536782 TLL2Q9Y6L7 1015 aa25.37■■□□□ 1.65
TNFRSF1B-204ENST00000536782 PSMD14O00487 310 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 LBX1P52954 281 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 CCDC152Q4G0S7 254 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 MICALL2Q8IY33 904 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 TBC1D16Q8TBP0 767 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 TRPM4Q8TD43 1214 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 DPF2Q92785 391 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 CAPNS2Q96L46 248 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 GLIS2Q9BZE0 524 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 SEC31BQ9NQW1 1179 aa25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 ZBTB12Q9Y330 459 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF1B-204ENST00000536782 PDE8AO60658 829 aa25.35■■□□□ 1.65
TNFRSF1B-204ENST00000536782 CELF2O95319 508 aaKnown RBP25.35■■□□□ 1.65
TNFRSF1B-204ENST00000536782 HSPA8P11142 646 aaKnown RBP25.35■■□□□ 1.65
TNFRSF1B-204ENST00000536782 TSPYL6Q8N831 410 aa25.35■■□□□ 1.65
TNFRSF1B-204ENST00000536782 SHTN1A0MZ66 631 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 ECE2O60344 883 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 GRM1Q13255 1194 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 CCDC184Q52MB2 194 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms