RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ECHDC1Q9NTX5 307 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 RGPD5Q99666 1765 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 HAND2P61296 217 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 TCIRG1Q13488 830 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 DCCP43146 1447 aa9.89□□□□□ -0.83
ABCA4-207ENST00000536513 PALLDQ8WX93 1383 aa9.88□□□□□ -0.83
ABCA4-207ENST00000536513 IFIT1P09914 478 aaKnown RBP9.88□□□□□ -0.83
ABCA4-207ENST00000536513 SSH3Q8TE77 659 aa9.88□□□□□ -0.83
ABCA4-207ENST00000536513 TEX13AQ9BXU3 409 aaPredicted RBP9.88□□□□□ -0.83
ABCA4-207ENST00000536513 RTCBQ9Y3I0 505 aaKnown RBP9.88□□□□□ -0.83
ABCA4-207ENST00000536513 SASH1O94885 1247 aa9.88□□□□□ -0.83
ABCA4-207ENST00000536513 CYP19A1P11511 503 aaPredicted RBP9.88□□□□□ -0.83
ABCA4-207ENST00000536513 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
ABCA4-207ENST00000536513 ANKRD18BA2A2Z9 1011 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 ADORA1P30542 326 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 KAZALD1Q96I82 304 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 ANKRD26Q9UPS8 1709 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 CHST3Q7LGC8 479 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 CPDO75976 1380 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 A0A1B0GUL7 405 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 G3V3G9 751 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 SUSD4Q5VX71 490 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 TRPC5Q9UL62 973 aaPredicted RBP9.87□□□□□ -0.83
ABCA4-207ENST00000536513 ISY1Q9ULR0 285 aaKnown RBP9.87□□□□□ -0.83
ABCA4-207ENST00000536513 SPATA31A5Q5VU36 1347 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 SPATA31A7Q8IWB4 1347 aa9.87□□□□□ -0.83
ABCA4-207ENST00000536513 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 RRP12Q5JTH9 1297 aaKnown RBP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 CCDC158Q5M9N0 1113 aa9.86□□□□□ -0.83
ABCA4-207ENST00000536513 ERC1Q8IUD2 1116 aa9.86□□□□□ -0.83
ABCA4-207ENST00000536513 GPR101Q96P66 508 aaPredicted RBP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 CHMP5Q9NZZ3 219 aa9.86□□□□□ -0.83
ABCA4-207ENST00000536513 ANKIB1Q9P2G1 1089 aa9.86□□□□□ -0.83
ABCA4-207ENST00000536513 ZNF142P52746 1687 aaPredicted RBP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 WTIPA6NIX2 430 aaPredicted RBP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 XRCC6P12956 609 aaKnown RBP eCLIP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 TBC1D32Q96NH3 1257 aa9.86□□□□□ -0.83
ABCA4-207ENST00000536513 DDX49Q9Y6V7 483 aaKnown RBP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
ABCA4-207ENST00000536513 UTP14AQ9BVJ6 771 aaKnown RBP9.86□□□□□ -0.83
ABCA4-207ENST00000536513 NCOA3Q9Y6Q9 1424 aa9.86□□□□□ -0.83
ABCA4-207ENST00000536513 JCADQ9P266 1359 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 RAB11FIP3O75154 756 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 CD2BP2O95400 341 aaKnown RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 IGHMBP2P38935 993 aaKnown RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 CHAMP1Q96JM3 812 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 ANTXR1Q9H6X2 564 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 TPM2P07951 284 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 PTPN12Q05209 780 aaKnown RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 KRT27Q7Z3Y8 459 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 NLRP10Q86W26 655 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 CCDC191Q8NCU4 936 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 GRPEL1Q9HAV7 217 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 DBNLQ9UJU6 430 aaKnown RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 OVOS2A0A0G2JMS6 1433 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 MAP3K15Q6ZN16 1313 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 LINC00116Q8NCU8 138 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 JAKMIP1Q96N16 626 aaKnown RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 IL25Q9H293 177 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 ZHX1Q9UKY1 873 aaPredicted RBP9.85□□□□□ -0.83
ABCA4-207ENST00000536513 PALD1Q9ULE6 856 aa9.85□□□□□ -0.83
ABCA4-207ENST00000536513 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 ST18O60284 1047 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 MCM4P33991 863 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 NMIQ13287 307 aaPredicted RBP9.84□□□□□ -0.83
ABCA4-207ENST00000536513 TNNI3KQ59H18 835 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 BCCIPQ9P287 314 aaKnown RBP eCLIP9.84□□□□□ -0.83
ABCA4-207ENST00000536513 ZNF652Q9Y2D9 606 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 FPGT-TNNI3KV9GXZ4 949 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 RGS12O14924 1447 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 SH3TC1Q8TE82 1336 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 RAD21O60216 631 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 CASTP20810 708 aaKnown RBP9.84□□□□□ -0.83
ABCA4-207ENST00000536513 ATP2B3Q16720 1220 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 ERFEQ4G0M1 354 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 SMARCC1Q92922 1105 aaPredicted RBP9.84□□□□□ -0.83
ABCA4-207ENST00000536513 CHMLP26374 656 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 KCTD17Q8N5Z5 321 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 MIGA1Q8NAN2 632 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 LRP2BPQ9P2M1 347 aa9.84□□□□□ -0.83
ABCA4-207ENST00000536513 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
ABCA4-207ENST00000536513 F8W031 263 aaPredicted RBP9.83□□□□□ -0.84
ABCA4-207ENST00000536513 NWD1Q149M9 1564 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 SLC51AQ86UW1 340 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.84
ABCA4-207ENST00000536513 RAI14Q9P0K7 980 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 EYA2O00167 538 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 ZNF592Q92610 1267 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 ESYT1Q9BSJ8 1104 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
ABCA4-207ENST00000536513 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 ZKSCAN1P17029 563 aaPredicted RBP9.83□□□□□ -0.84
ABCA4-207ENST00000536513 CLCN1P35523 988 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms