RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 WWC1Q8IX03 1113 aa16.14■□□□□ 0.17
PRKDC-207ENST00000536483 VPS33BQ9H267 617 aa16.14■□□□□ 0.17
PRKDC-207ENST00000536483 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
PRKDC-207ENST00000536483 WDR33Q9C0J8 1336 aaKnown RBP16.14■□□□□ 0.17
PRKDC-207ENST00000536483 BBOX1O75936 387 aa16.13■□□□□ 0.17
PRKDC-207ENST00000536483 LBX1P52954 281 aa16.13■□□□□ 0.17
PRKDC-207ENST00000536483 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
PRKDC-207ENST00000536483 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
PRKDC-207ENST00000536483 RTFDC1Q9BY42 306 aaPredicted RBP16.13■□□□□ 0.17
PRKDC-207ENST00000536483 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
PRKDC-207ENST00000536483 DBF4Q9UBU7 674 aaPredicted RBP16.13■□□□□ 0.17
PRKDC-207ENST00000536483 TRAF5O00463 557 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 CXCL9Q07325 125 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 DPP8Q6V1X1 898 aaPredicted RBP16.12■□□□□ 0.17
PRKDC-207ENST00000536483 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 MPNDQ8N594 471 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 SUPT20HQ8NEM7 779 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 ZNF428Q96B54 188 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 GPRC5DQ9NZD1 345 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
PRKDC-207ENST00000536483 ZNRF3Q9ULT6 936 aa16.12■□□□□ 0.17
PRKDC-207ENST00000536483 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
PRKDC-207ENST00000536483 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
PRKDC-207ENST00000536483 DDX46Q7L014 1031 aaKnown RBP16.11■□□□□ 0.17
PRKDC-207ENST00000536483 ADARB2Q9NS39 739 aaKnown RBP16.11■□□□□ 0.17
PRKDC-207ENST00000536483 SH3TC1Q8TE82 1336 aa16.11■□□□□ 0.17
PRKDC-207ENST00000536483 GMPSP49915 693 aaPredicted RBP16.1■□□□□ 0.17
PRKDC-207ENST00000536483 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
PRKDC-207ENST00000536483 GRAPQ13588 217 aa16.1■□□□□ 0.17
PRKDC-207ENST00000536483 CST9Q5W186 159 aa16.1■□□□□ 0.17
PRKDC-207ENST00000536483 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
PRKDC-207ENST00000536483 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
PRKDC-207ENST00000536483 HYPKQ9NX55 129 aa16.1■□□□□ 0.17
PRKDC-207ENST00000536483 CHPF2Q9P2E5 772 aa16.1■□□□□ 0.17
PRKDC-207ENST00000536483 HSPA8P11142 646 aaKnown RBP16.09■□□□□ 0.17
PRKDC-207ENST00000536483 KIAA2012Q0VF49 1180 aa16.09■□□□□ 0.17
PRKDC-207ENST00000536483 GRM1Q13255 1194 aa16.09■□□□□ 0.17
PRKDC-207ENST00000536483 CIAPIN1Q6FI81 312 aa16.09■□□□□ 0.17
PRKDC-207ENST00000536483 CYP4F22Q6NT55 531 aa16.09■□□□□ 0.17
PRKDC-207ENST00000536483 CAPNS2Q96L46 248 aa16.09■□□□□ 0.17
PRKDC-207ENST00000536483 RAD17O75943 681 aa16.08■□□□□ 0.16
PRKDC-207ENST00000536483 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
PRKDC-207ENST00000536483 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.16
PRKDC-207ENST00000536483 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.16
PRKDC-207ENST00000536483 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
PRKDC-207ENST00000536483 ECE1P42892 770 aa16.07■□□□□ 0.16
PRKDC-207ENST00000536483 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
PRKDC-207ENST00000536483 GPR101Q96P66 508 aaPredicted RBP16.07■□□□□ 0.16
PRKDC-207ENST00000536483 BCL2L13Q9BXK5 485 aa16.07■□□□□ 0.16
PRKDC-207ENST00000536483 TLL2Q9Y6L7 1015 aa16.07■□□□□ 0.16
PRKDC-207ENST00000536483 LAMB2P55268 1798 aa16.07■□□□□ 0.16
PRKDC-207ENST00000536483 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
PRKDC-207ENST00000536483 HIRAP54198 1017 aaPredicted RBP16.06■□□□□ 0.16
PRKDC-207ENST00000536483 TNIP1Q15025 636 aa16.06■□□□□ 0.16
PRKDC-207ENST00000536483 FAM89AQ96GI7 184 aa16.06■□□□□ 0.16
PRKDC-207ENST00000536483 GLIS2Q9BZE0 524 aaPredicted RBP16.06■□□□□ 0.16
PRKDC-207ENST00000536483 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
PRKDC-207ENST00000536483 CELF2O95319 508 aaKnown RBP16.05■□□□□ 0.16
PRKDC-207ENST00000536483 TMC4Q7Z404 712 aa16.05■□□□□ 0.16
PRKDC-207ENST00000536483 CELF1Q92879 486 aaKnown RBP16.05■□□□□ 0.16
PRKDC-207ENST00000536483 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
PRKDC-207ENST00000536483 PGAP2Q9UHJ9 254 aa16.05■□□□□ 0.16
PRKDC-207ENST00000536483 TAF1P21675 1872 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 TRPM7Q96QT4 1865 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 AOC2O75106 756 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 TSPYL6Q8N831 410 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 TRPM4Q8TD43 1214 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 BEGAINQ9BUH8 593 aa16.04■□□□□ 0.16
PRKDC-207ENST00000536483 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
PRKDC-207ENST00000536483 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
PRKDC-207ENST00000536483 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
PRKDC-207ENST00000536483 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-207ENST00000536483 SAPCD2Q86UD0 394 aa16.03■□□□□ 0.16
PRKDC-207ENST00000536483 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
PRKDC-207ENST00000536483 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
PRKDC-207ENST00000536483 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-207ENST00000536483 DUOX1Q9NRD9 1551 aa16.03■□□□□ 0.16
PRKDC-207ENST00000536483 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
PRKDC-207ENST00000536483 H7C1D1 291 aa16.02■□□□□ 0.16
PRKDC-207ENST00000536483 ELL2O00472 640 aaPredicted RBP16.02■□□□□ 0.16
PRKDC-207ENST00000536483 RIMBP2O15034 1052 aa16.02■□□□□ 0.16
PRKDC-207ENST00000536483 WASHC4Q2M389 1173 aa16.02■□□□□ 0.16
PRKDC-207ENST00000536483 CDC37L1Q7L3B6 337 aa16.02■□□□□ 0.16
PRKDC-207ENST00000536483 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.16
PRKDC-207ENST00000536483 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
PRKDC-207ENST00000536483 THSD7BQ9C0I4 1608 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 MAP2K2P36507 400 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 GPSM2P81274 684 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 FAM9BQ8IZU0 186 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 ABHD8Q96I13 439 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
PRKDC-207ENST00000536483 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 TSKSQ9UJT2 592 aa16.01■□□□□ 0.15
PRKDC-207ENST00000536483 FANCIQ9NVI1 1328 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms