RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ZNF541Q9H0D2 1346 aa18.26■□□□□ 0.51
UBE3B-206ENST00000536398 COL4A5P29400 1685 aa18.26■□□□□ 0.51
UBE3B-206ENST00000536398 DICER1Q9UPY3 1922 aaKnown RBP18.26■□□□□ 0.51
UBE3B-206ENST00000536398 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
UBE3B-206ENST00000536398 F6X3S4 739 aa18.26■□□□□ 0.51
UBE3B-206ENST00000536398 TOMM70O94826 608 aa18.26■□□□□ 0.51
UBE3B-206ENST00000536398 SP8Q8IXZ3 490 aa18.26■□□□□ 0.51
UBE3B-206ENST00000536398 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
UBE3B-206ENST00000536398 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
UBE3B-206ENST00000536398 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
UBE3B-206ENST00000536398 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
UBE3B-206ENST00000536398 DNAAF4Q8WXU2 420 aa18.25■□□□□ 0.51
UBE3B-206ENST00000536398 PDE8AO60658 829 aa18.24■□□□□ 0.51
UBE3B-206ENST00000536398 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
UBE3B-206ENST00000536398 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
UBE3B-206ENST00000536398 E9PSI1 815 aa18.23■□□□□ 0.51
UBE3B-206ENST00000536398 FZD9O00144 591 aa18.23■□□□□ 0.51
UBE3B-206ENST00000536398 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
UBE3B-206ENST00000536398 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
UBE3B-206ENST00000536398 MPNDQ8N594 471 aa18.23■□□□□ 0.51
UBE3B-206ENST00000536398 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
UBE3B-206ENST00000536398 H7C1W4 665 aa18.22■□□□□ 0.51
UBE3B-206ENST00000536398 GCKRQ14397 625 aa18.22■□□□□ 0.51
UBE3B-206ENST00000536398 AOC3Q16853 763 aa18.22■□□□□ 0.51
UBE3B-206ENST00000536398 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
UBE3B-206ENST00000536398 RBM46Q8TBY0 533 aaKnown RBP18.22■□□□□ 0.51
UBE3B-206ENST00000536398 RTFDC1Q9BY42 306 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-206ENST00000536398 CDHR2Q9BYE9 1310 aa18.22■□□□□ 0.51
UBE3B-206ENST00000536398 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
UBE3B-206ENST00000536398 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
UBE3B-206ENST00000536398 UBE3BQ7Z3V4 1068 aa18.21■□□□□ 0.51
UBE3B-206ENST00000536398 JDP2Q8WYK2 163 aa18.21■□□□□ 0.51
UBE3B-206ENST00000536398 HSPA6P17066 643 aa18.2■□□□□ 0.5
UBE3B-206ENST00000536398 CASP7P55210 303 aa18.2■□□□□ 0.5
UBE3B-206ENST00000536398 CTSWP56202 376 aa18.2■□□□□ 0.5
UBE3B-206ENST00000536398 GPSM2P81274 684 aa18.2■□□□□ 0.5
UBE3B-206ENST00000536398 CCDC152Q4G0S7 254 aa18.2■□□□□ 0.5
UBE3B-206ENST00000536398 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
UBE3B-206ENST00000536398 LINS1Q8NG48 757 aa18.2■□□□□ 0.5
UBE3B-206ENST00000536398 WDR90Q96KV7 1748 aa18.2■□□□□ 0.5
UBE3B-206ENST00000536398 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
UBE3B-206ENST00000536398 BEND3Q5T5X7 828 aa18.19■□□□□ 0.5
UBE3B-206ENST00000536398 TMC4Q7Z404 712 aa18.19■□□□□ 0.5
UBE3B-206ENST00000536398 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
UBE3B-206ENST00000536398 TTLL11Q8NHH1 800 aa18.19■□□□□ 0.5
UBE3B-206ENST00000536398 NSFL1CQ9UNZ2 370 aaKnown RBP18.19■□□□□ 0.5
UBE3B-206ENST00000536398 CEP350Q5VT06 3117 aa18.18■□□□□ 0.5
UBE3B-206ENST00000536398 POTEIP0CG38 1075 aa18.18■□□□□ 0.5
UBE3B-206ENST00000536398 POTEJP0CG39 1038 aa18.18■□□□□ 0.5
UBE3B-206ENST00000536398 SUPT20HQ8NEM7 779 aa18.18■□□□□ 0.5
UBE3B-206ENST00000536398 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
UBE3B-206ENST00000536398 GREM2Q9H772 168 aa18.18■□□□□ 0.5
UBE3B-206ENST00000536398 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
UBE3B-206ENST00000536398 EIF6P56537 245 aaKnown RBP18.17■□□□□ 0.5
UBE3B-206ENST00000536398 NIM1KQ8IY84 436 aa18.17■□□□□ 0.5
UBE3B-206ENST00000536398 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
UBE3B-206ENST00000536398 L3MBTL3Q96JM7 780 aaPredicted RBP18.17■□□□□ 0.5
UBE3B-206ENST00000536398 BCL2L13Q9BXK5 485 aa18.17■□□□□ 0.5
UBE3B-206ENST00000536398 GJA3Q9Y6H8 435 aa18.17■□□□□ 0.5
UBE3B-206ENST00000536398 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
UBE3B-206ENST00000536398 DUOX1Q9NRD9 1551 aa18.17■□□□□ 0.5
UBE3B-206ENST00000536398 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
UBE3B-206ENST00000536398 FSTL1Q12841 308 aa18.16■□□□□ 0.5
UBE3B-206ENST00000536398 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
UBE3B-206ENST00000536398 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
UBE3B-206ENST00000536398 C6orf229H3BNL8 230 aa18.15■□□□□ 0.5
UBE3B-206ENST00000536398 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
UBE3B-206ENST00000536398 ANKRD18AQ8IVF6 992 aa18.15■□□□□ 0.5
UBE3B-206ENST00000536398 GPC2Q8N158 579 aa18.15■□□□□ 0.5
UBE3B-206ENST00000536398 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
UBE3B-206ENST00000536398 PLA2G12BQ9BX93 195 aa18.15■□□□□ 0.5
UBE3B-206ENST00000536398 TAF1DQ9H5J8 278 aaPredicted RBP18.15■□□□□ 0.5
UBE3B-206ENST00000536398 WTIPA6NIX2 430 aaPredicted RBP18.14■□□□□ 0.49
UBE3B-206ENST00000536398 TBC1D16Q8TBP0 767 aa18.14■□□□□ 0.49
UBE3B-206ENST00000536398 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
UBE3B-206ENST00000536398 LRRC37AA6NMS7 1700 aa18.14■□□□□ 0.49
UBE3B-206ENST00000536398 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
UBE3B-206ENST00000536398 HTRA3P83110 453 aa18.13■□□□□ 0.49
UBE3B-206ENST00000536398 CXCL9Q07325 125 aa18.13■□□□□ 0.49
UBE3B-206ENST00000536398 WASHC4Q2M389 1173 aa18.13■□□□□ 0.49
UBE3B-206ENST00000536398 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
UBE3B-206ENST00000536398 HACL1Q9UJ83 578 aa18.13■□□□□ 0.49
UBE3B-206ENST00000536398 IQCA1LA6NCM1 817 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 RAD17O75943 681 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 CSF1RP07333 972 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 FOXO4P98177 505 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 DOK7Q18PE1 504 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
UBE3B-206ENST00000536398 DBNDD1Q9H9R9 158 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 ANKIB1Q9P2G1 1089 aa18.12■□□□□ 0.49
UBE3B-206ENST00000536398 UFL1O94874 794 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 ITGA6P23229 1130 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 EPHX2P34913 555 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 EPS15P42566 896 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 SCNN1DP51172 638 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 EAPPQ56P03 285 aaPredicted RBP18.11■□□□□ 0.49
UBE3B-206ENST00000536398 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 KCNQ5Q9NR82 932 aa18.11■□□□□ 0.49
UBE3B-206ENST00000536398 PODXL2Q9NZ53 605 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms