RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PTMSP20962 102 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 FBLN1P23142 703 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 RAB3GAP1Q15042 981 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 TWISTNBQ3B726 338 aaPredicted RBP7.11□□□□□ -1.27
VPS33A-203ENST00000536212 ANKRD45Q5TZF3 282 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 INTS3Q68E01 1043 aaKnown RBP7.11□□□□□ -1.27
VPS33A-203ENST00000536212 CLEC17AQ6ZS10 378 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 NME9Q86XW9 330 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 RGS22Q8NE09 1264 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 HPS1Q92902 700 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 IRF7Q92985 503 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 MRGPRX2Q96LB1 330 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 THUMPD2Q9BTF0 503 aaKnown RBP7.11□□□□□ -1.27
VPS33A-203ENST00000536212 PRDM9Q9NQV7 894 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 MTMR7Q9Y216 660 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 ZNF330Q9Y3S2 320 aaPredicted RBP7.11□□□□□ -1.27
VPS33A-203ENST00000536212 EMILIN1Q9Y6C2 1016 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 NRKQ7Z2Y5 1582 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 MON2Q7Z3U7 1717 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 METP08581 1390 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 KIAA0232Q92628 1395 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 GOLGA6L3A6NEY3 463 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 CHL1O00533 1208 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 XRCC6P12956 609 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS33A-203ENST00000536212 ABL2P42684 1182 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 TRIM32Q13049 653 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 MSS51Q4VC12 460 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 TBC1D9Q6ZT07 1266 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 C8orf58Q8NAV2 365 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 TSC1Q92574 1164 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 NUDT16Q96DE0 195 aaKnown RBP7.1□□□□□ -1.27
VPS33A-203ENST00000536212 CCDC97Q96F63 343 aaPredicted RBP7.1□□□□□ -1.27
VPS33A-203ENST00000536212 COG3Q96JB2 828 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 DCTPP1Q9H773 170 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 SERPINA10Q9UK55 444 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 TBC1D2BQ9UPU7 963 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 NDUFB9Q9Y6M9 179 aa7.1□□□□□ -1.27
VPS33A-203ENST00000536212 DIP2BQ9P265 1576 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 CFAP99D6REC4 459 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 K7ELQ4 463 aaPredicted RBP7.09□□□□□ -1.27
VPS33A-203ENST00000536212 CDC45O75419 566 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 MRE11P49959 708 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 BRICD5Q6PL45 260 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 PLEKHM2Q8IWE5 1019 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 ANKRD44Q8N8A2 993 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 SLC27A5Q9Y2P5 690 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 C3P01024 1663 aa7.09□□□□□ -1.27
VPS33A-203ENST00000536212 OVOS2A0A0J9YW53 1432 aa7.09□□□□□ -1.28
VPS33A-203ENST00000536212 RGS12O14924 1447 aa7.09□□□□□ -1.28
VPS33A-203ENST00000536212 OVOS2Q6IE36 1432 aa7.09□□□□□ -1.28
VPS33A-203ENST00000536212 ATP10DQ9P241 1426 aa7.09□□□□□ -1.28
VPS33A-203ENST00000536212 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
VPS33A-203ENST00000536212 AKAP12Q02952 1782 aa7.08□□□□□ -1.28
VPS33A-203ENST00000536212 PRR36Q9H6K5 1346 aa7.08□□□□□ -1.28
VPS33A-203ENST00000536212 GSPT1P15170 499 aaKnown RBP7.08□□□□□ -1.28
VPS33A-203ENST00000536212 CTDSPL2Q05D32 466 aa7.08□□□□□ -1.28
VPS33A-203ENST00000536212 SKOR2Q2VWA4 1001 aaPredicted RBP7.08□□□□□ -1.28
VPS33A-203ENST00000536212 TTC22Q5TAA0 569 aa7.08□□□□□ -1.28
VPS33A-203ENST00000536212 RPAP2Q8IXW5 612 aaPredicted RBP7.08□□□□□ -1.28
VPS33A-203ENST00000536212 TNPO1Q92973 898 aaKnown RBP7.08□□□□□ -1.28
VPS33A-203ENST00000536212 GBP4Q96PP9 640 aa7.08□□□□□ -1.28
VPS33A-203ENST00000536212 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
VPS33A-203ENST00000536212 RRAGDQ9NQL2 400 aaPredicted RBP7.08□□□□□ -1.28
VPS33A-203ENST00000536212 PTPRCP08575 1304 aa7.07□□□□□ -1.28
VPS33A-203ENST00000536212 MAP2P11137 1827 aaKnown RBP7.07□□□□□ -1.28
VPS33A-203ENST00000536212 HSP90AB1P08238 724 aaKnown RBP7.07□□□□□ -1.28
VPS33A-203ENST00000536212 FAM69CQ0P6D2 419 aa7.07□□□□□ -1.28
VPS33A-203ENST00000536212 EIF4A2Q14240 407 aaKnown RBP7.07□□□□□ -1.28
VPS33A-203ENST00000536212 RABEP1Q15276 862 aa7.07□□□□□ -1.28
VPS33A-203ENST00000536212 Q3C1V9 767 aa7.07□□□□□ -1.28
VPS33A-203ENST00000536212 PRR7Q8TB68 274 aa7.07□□□□□ -1.28
VPS33A-203ENST00000536212 GJD4Q96KN9 370 aaPredicted RBP7.07□□□□□ -1.28
VPS33A-203ENST00000536212 HMX1Q9NP08 348 aaPredicted RBP7.07□□□□□ -1.28
VPS33A-203ENST00000536212 CRB1P82279 1406 aa7.07□□□□□ -1.28
VPS33A-203ENST00000536212 SSH2Q76I76 1423 aa7.07□□□□□ -1.28
VPS33A-203ENST00000536212 TTC21BQ7Z4L5 1316 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 FAM83GA6ND36 823 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 H3BM21 787 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 IGSF3O75054 1194 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 RRS1Q15050 365 aaKnown RBP7.06□□□□□ -1.28
VPS33A-203ENST00000536212 CEP85Q6P2H3 762 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 TXNDC2Q86VQ3 553 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 RETREG3Q86VR2 466 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
VPS33A-203ENST00000536212 USP26Q9BXU7 913 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 GRPEL1Q9HAV7 217 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 ADAMTS13Q76LX8 1427 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 RGPD1P0DJD0 1748 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 RTL1A6NKG5 1358 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 ARHGEF10O15013 1369 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 TMEM2Q9UHN6 1383 aa7.06□□□□□ -1.28
VPS33A-203ENST00000536212 USP6P35125 1406 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 ELL2O00472 640 aaPredicted RBP7.05□□□□□ -1.28
VPS33A-203ENST00000536212 CYP2E1P05181 493 aaPredicted RBP7.05□□□□□ -1.28
VPS33A-203ENST00000536212 MMP16P51512 607 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 DCTN1Q14203 1278 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 FOXD4L5Q5VV16 416 aaPredicted RBP7.05□□□□□ -1.28
VPS33A-203ENST00000536212 LRRN4Q8WUT4 740 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms