RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 CNBD1Q8NA66 436 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 TAOK3Q9H2K8 898 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 RIC1Q4ADV7 1423 aa16.18■□□□□ 0.18
DDB1-207ENST00000535967 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
DDB1-207ENST00000535967 SRGNP10124 158 aa16.18■□□□□ 0.18
DDB1-207ENST00000535967 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
DDB1-207ENST00000535967 FLIIQ13045 1269 aa16.18■□□□□ 0.18
DDB1-207ENST00000535967 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
DDB1-207ENST00000535967 PARP10Q53GL7 1025 aa16.17■□□□□ 0.18
DDB1-207ENST00000535967 ZNF34Q8IZ26 560 aa16.17■□□□□ 0.18
DDB1-207ENST00000535967 MKRN1Q9UHC7 482 aaKnown RBP16.17■□□□□ 0.18
DDB1-207ENST00000535967 RNF123Q5XPI4 1314 aa16.16■□□□□ 0.18
DDB1-207ENST00000535967 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
DDB1-207ENST00000535967 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
DDB1-207ENST00000535967 STYK1Q6J9G0 422 aa16.16■□□□□ 0.18
DDB1-207ENST00000535967 OLFM4Q6UX06 510 aa16.16■□□□□ 0.18
DDB1-207ENST00000535967 RIC3Q7Z5B4 369 aa16.16■□□□□ 0.18
DDB1-207ENST00000535967 PDZRN3Q9UPQ7 1066 aa16.16■□□□□ 0.18
DDB1-207ENST00000535967 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
DDB1-207ENST00000535967 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
DDB1-207ENST00000535967 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
DDB1-207ENST00000535967 G2E3Q7L622 706 aa16.15■□□□□ 0.18
DDB1-207ENST00000535967 C7orf43Q8WVR3 580 aa16.15■□□□□ 0.18
DDB1-207ENST00000535967 CNKSR1Q969H4 720 aa16.15■□□□□ 0.18
DDB1-207ENST00000535967 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
DDB1-207ENST00000535967 PTPRCP08575 1304 aa16.14■□□□□ 0.17
DDB1-207ENST00000535967 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
DDB1-207ENST00000535967 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
DDB1-207ENST00000535967 SSH1Q8WYL5 1049 aa16.14■□□□□ 0.17
DDB1-207ENST00000535967 MASTLQ96GX5 879 aa16.14■□□□□ 0.17
DDB1-207ENST00000535967 SMC4Q9NTJ3 1288 aa16.14■□□□□ 0.17
DDB1-207ENST00000535967 SCN4AP35499 1836 aa16.14■□□□□ 0.17
DDB1-207ENST00000535967 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 NPHP1O15259 732 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 GPTP24298 496 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 BRPF1P55201 1214 aaPredicted RBP16.13■□□□□ 0.17
DDB1-207ENST00000535967 ST5P78524 1137 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 PPP1R42Q7Z4L9 355 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
DDB1-207ENST00000535967 MAP3K2Q9Y2U5 619 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 ZNF541Q9H0D2 1346 aa16.13■□□□□ 0.17
DDB1-207ENST00000535967 PI4KAP2A4QPH2 592 aa16.12■□□□□ 0.17
DDB1-207ENST00000535967 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
DDB1-207ENST00000535967 NEXNQ0ZGT2 675 aa16.12■□□□□ 0.17
DDB1-207ENST00000535967 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
DDB1-207ENST00000535967 GSE1Q14687 1217 aa16.12■□□□□ 0.17
DDB1-207ENST00000535967 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
DDB1-207ENST00000535967 PI4KAP1Q8N8J0 262 aa16.12■□□□□ 0.17
DDB1-207ENST00000535967 ADAMTSL1Q8N6G6 1762 aa16.12■□□□□ 0.17
DDB1-207ENST00000535967 PASKQ96RG2 1323 aa16.12■□□□□ 0.17
DDB1-207ENST00000535967 NTSR2O95665 410 aa16.11■□□□□ 0.17
DDB1-207ENST00000535967 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
DDB1-207ENST00000535967 DNAAF4Q8WXU2 420 aa16.11■□□□□ 0.17
DDB1-207ENST00000535967 L3MBTL3Q96JM7 780 aaPredicted RBP16.11■□□□□ 0.17
DDB1-207ENST00000535967 TAF1DQ9H5J8 278 aaPredicted RBP16.11■□□□□ 0.17
DDB1-207ENST00000535967 FOXN1O15353 648 aa16.11■□□□□ 0.17
DDB1-207ENST00000535967 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
DDB1-207ENST00000535967 MYD88Q99836 296 aa16.11■□□□□ 0.17
DDB1-207ENST00000535967 BCL2L13Q9BXK5 485 aa16.11■□□□□ 0.17
DDB1-207ENST00000535967 ZNF277Q9NRM2 450 aaPredicted RBP16.11■□□□□ 0.17
DDB1-207ENST00000535967 CNTNAP1P78357 1384 aa16.1■□□□□ 0.17
DDB1-207ENST00000535967 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
DDB1-207ENST00000535967 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
DDB1-207ENST00000535967 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
DDB1-207ENST00000535967 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
DDB1-207ENST00000535967 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
DDB1-207ENST00000535967 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
DDB1-207ENST00000535967 ITGBL1O95965 494 aaPredicted RBP16.09■□□□□ 0.17
DDB1-207ENST00000535967 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
DDB1-207ENST00000535967 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
DDB1-207ENST00000535967 LDHDQ86WU2 507 aa16.09■□□□□ 0.17
DDB1-207ENST00000535967 SNED1Q8TER0 1413 aa16.08■□□□□ 0.17
DDB1-207ENST00000535967 COL4A5P29400 1685 aa16.08■□□□□ 0.16
DDB1-207ENST00000535967 ATP5J2-PTCD1G3V325 749 aa16.08■□□□□ 0.16
DDB1-207ENST00000535967 NPR1P16066 1061 aa16.08■□□□□ 0.16
DDB1-207ENST00000535967 GTF2E1P29083 439 aaPredicted RBP16.08■□□□□ 0.16
DDB1-207ENST00000535967 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDB1-207ENST00000535967 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
DDB1-207ENST00000535967 LINS1Q8NG48 757 aa16.08■□□□□ 0.16
DDB1-207ENST00000535967 CWC25Q9NXE8 425 aaPredicted RBP16.08■□□□□ 0.16
DDB1-207ENST00000535967 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
DDB1-207ENST00000535967 IQCA1LA6NCM1 817 aa16.07■□□□□ 0.16
DDB1-207ENST00000535967 VEGFBP49765 207 aa16.07■□□□□ 0.16
DDB1-207ENST00000535967 EAPPQ56P03 285 aaPredicted RBP16.07■□□□□ 0.16
DDB1-207ENST00000535967 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
DDB1-207ENST00000535967 NEURL1BA8MQ27 555 aa16.06■□□□□ 0.16
DDB1-207ENST00000535967 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
DDB1-207ENST00000535967 ARHGAP45Q92619 1136 aa16.06■□□□□ 0.16
DDB1-207ENST00000535967 API5Q9BZZ5 524 aaKnown RBP16.06■□□□□ 0.16
DDB1-207ENST00000535967 LTBP1Q14766 1721 aa16.06■□□□□ 0.16
DDB1-207ENST00000535967 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
DDB1-207ENST00000535967 F6X3S4 739 aa16.05■□□□□ 0.16
DDB1-207ENST00000535967 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
DDB1-207ENST00000535967 NUTM1Q86Y26 1132 aa16.05■□□□□ 0.16
DDB1-207ENST00000535967 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
DDB1-207ENST00000535967 LRRC37AA6NMS7 1700 aa16.04■□□□□ 0.16
DDB1-207ENST00000535967 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
DDB1-207ENST00000535967 ALDH1L1O75891 902 aa16.04■□□□□ 0.16
DDB1-207ENST00000535967 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms