RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SURF6O75683 361 aaKnown RBP9.82□□□□□ -0.84
COL21A1-212ENST00000535941 EAF2Q96CJ1 260 aaPredicted RBP9.82□□□□□ -0.84
COL21A1-212ENST00000535941 IL25Q9H293 177 aa9.82□□□□□ -0.84
COL21A1-212ENST00000535941 PA2G4Q9UQ80 394 aaKnown RBP9.82□□□□□ -0.84
COL21A1-212ENST00000535941 EP400Q96L91 3159 aa9.82□□□□□ -0.84
COL21A1-212ENST00000535941 A0A087WZG4 1122 aa9.81□□□□□ -0.84
COL21A1-212ENST00000535941 HSP90AB3PQ58FF7 597 aa9.81□□□□□ -0.84
COL21A1-212ENST00000535941 DUOX1Q9NRD9 1551 aa9.81□□□□□ -0.84
COL21A1-212ENST00000535941 KCNQ2O43526 872 aa9.81□□□□□ -0.84
COL21A1-212ENST00000535941 FAM98CQ17RN3 349 aaKnown RBP9.81□□□□□ -0.84
COL21A1-212ENST00000535941 UBE3BQ7Z3V4 1068 aa9.81□□□□□ -0.84
COL21A1-212ENST00000535941 C8orf37Q96NL8 207 aa9.81□□□□□ -0.84
COL21A1-212ENST00000535941 ESYT1Q9BSJ8 1104 aa9.81□□□□□ -0.84
COL21A1-212ENST00000535941 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
COL21A1-212ENST00000535941 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
COL21A1-212ENST00000535941 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
COL21A1-212ENST00000535941 NTSR2O95665 410 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 CCDC88AQ3V6T2 1871 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 ATP5J2-PTCD1G3V325 749 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 PTF1AQ7RTS3 328 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 PSME4Q14997 1843 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 ZNF512BQ96KM6 892 aaPredicted RBP9.8□□□□□ -0.84
COL21A1-212ENST00000535941 BCL2L12Q9HB09 334 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 FPGT-TNNI3KV9GXZ4 949 aa9.8□□□□□ -0.84
COL21A1-212ENST00000535941 ATP5JP18859 108 aa9.79□□□□□ -0.84
COL21A1-212ENST00000535941 KIF6Q6ZMV9 814 aa9.79□□□□□ -0.84
COL21A1-212ENST00000535941 TLR7Q9NYK1 1049 aaKnown RBP9.79□□□□□ -0.84
COL21A1-212ENST00000535941 GLRX3O76003 335 aaKnown RBP9.79□□□□□ -0.84
COL21A1-212ENST00000535941 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
COL21A1-212ENST00000535941 ECHDC1Q9NTX5 307 aa9.79□□□□□ -0.84
COL21A1-212ENST00000535941 TRPC5Q9UL62 973 aaPredicted RBP9.79□□□□□ -0.84
COL21A1-212ENST00000535941 DBNLQ9UJU6 430 aaKnown RBP9.78□□□□□ -0.84
COL21A1-212ENST00000535941 RIPOR2Q9Y4F9 1068 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 SGSM2O43147 1006 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 NUTM1Q86Y26 1132 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 TTLL11Q8NHH1 800 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 NGLY1Q96IV0 654 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 LSG1Q9H089 658 aaKnown RBP9.78□□□□□ -0.84
COL21A1-212ENST00000535941 IL1RAPL2Q9NP60 686 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 RAD50Q92878 1312 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 ERC2O15083 957 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 ANAPC15P60006 121 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 TSHZ3Q63HK5 1081 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 LMBR1LQ6UX01 489 aa9.78□□□□□ -0.84
COL21A1-212ENST00000535941 CTSWP56202 376 aa9.77□□□□□ -0.84
COL21A1-212ENST00000535941 SLC10A5Q5PT55 438 aa9.77□□□□□ -0.84
COL21A1-212ENST00000535941 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.84
COL21A1-212ENST00000535941 KLHDC4Q8TBB5 520 aa9.77□□□□□ -0.84
COL21A1-212ENST00000535941 EYA2O00167 538 aa9.77□□□□□ -0.85
COL21A1-212ENST00000535941 ATP6V1AP38606 617 aa9.77□□□□□ -0.85
COL21A1-212ENST00000535941 IL15P40933 162 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-212ENST00000535941 FAM43AQ8N2R8 423 aa9.77□□□□□ -0.85
COL21A1-212ENST00000535941 HAUS7Q99871 368 aa9.77□□□□□ -0.85
COL21A1-212ENST00000535941 IRS2Q9Y4H2 1338 aa9.77□□□□□ -0.85
COL21A1-212ENST00000535941 RPAP1Q9BWH6 1393 aaPredicted RBP9.77□□□□□ -0.85
COL21A1-212ENST00000535941 FGFR2P21802 821 aa9.77□□□□□ -0.85
COL21A1-212ENST00000535941 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.85
COL21A1-212ENST00000535941 PARP10Q53GL7 1025 aa9.77□□□□□ -0.85
COL21A1-212ENST00000535941 CLASRPQ8N2M8 674 aaKnown RBP9.77□□□□□ -0.85
COL21A1-212ENST00000535941 RBM42Q9BTD8 480 aaKnown RBP9.77□□□□□ -0.85
COL21A1-212ENST00000535941 KAT6BQ8WYB5 2073 aa9.76□□□□□ -0.85
COL21A1-212ENST00000535941 CD2BP2O95400 341 aaKnown RBP9.76□□□□□ -0.85
COL21A1-212ENST00000535941 HSPA4P34932 840 aa9.76□□□□□ -0.85
COL21A1-212ENST00000535941 TFCP2Q12800 502 aa9.76□□□□□ -0.85
COL21A1-212ENST00000535941 AMIGO3Q86WK7 504 aa9.76□□□□□ -0.85
COL21A1-212ENST00000535941 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
COL21A1-212ENST00000535941 ACSBG1Q96GR2 724 aa9.76□□□□□ -0.85
COL21A1-212ENST00000535941 PDE8AO60658 829 aa9.75□□□□□ -0.85
COL21A1-212ENST00000535941 RPS6KA4O75676 772 aa9.75□□□□□ -0.85
COL21A1-212ENST00000535941 SUSD4Q5VX71 490 aa9.75□□□□□ -0.85
COL21A1-212ENST00000535941 BRCA1P38398 1863 aaKnown RBP9.75□□□□□ -0.85
COL21A1-212ENST00000535941 SH3TC1Q8TE82 1336 aa9.75□□□□□ -0.85
COL21A1-212ENST00000535941 HSP90AA2PQ14568 343 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-212ENST00000535941 USPL1Q5W0Q7 1092 aa9.75□□□□□ -0.85
COL21A1-212ENST00000535941 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
COL21A1-212ENST00000535941 G3BP1Q13283 466 aaKnown RBP eCLIP9.75□□□□□ -0.85
COL21A1-212ENST00000535941 REC8O95072 547 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 LRRC24Q50LG9 513 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 AACSQ86V21 672 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 CNTROBQ8N137 903 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 NARFQ9UHQ1 456 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 JARID2Q92833 1246 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-212ENST00000535941 RABEP1Q15276 862 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 SF3B3Q15393 1217 aaKnown RBP9.74□□□□□ -0.85
COL21A1-212ENST00000535941 PAXIP1Q6ZW49 1069 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-212ENST00000535941 SEPT12Q8IYM1 358 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 SYNE4Q8N205 404 aa9.74□□□□□ -0.85
COL21A1-212ENST00000535941 ALDH8A1Q9H2A2 487 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-212ENST00000535941 COL1A1P02452 1464 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-212ENST00000535941 CLEC17AQ6ZS10 378 aa9.73□□□□□ -0.85
COL21A1-212ENST00000535941 FAM89AQ96GI7 184 aa9.73□□□□□ -0.85
COL21A1-212ENST00000535941 TTC14Q96N46 770 aa9.73□□□□□ -0.85
COL21A1-212ENST00000535941 NAP1L5Q96NT1 182 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-212ENST00000535941 PUS3Q9BZE2 481 aaKnown RBP9.73□□□□□ -0.85
COL21A1-212ENST00000535941 GREM2Q9H772 168 aa9.73□□□□□ -0.85
COL21A1-212ENST00000535941 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms