RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 CAMKK2Q96RR4 588 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 NYXQ9GZU5 481 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.11
CDCA3-205ENST00000535871 RTL9Q8NET4 1388 aa8.09□□□□□ -1.12
CDCA3-205ENST00000535871 PITPNM1O00562 1244 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 GNPATO15228 680 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 RAB11FIP3O75154 756 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 NBPF7P0C2Y1 421 aaPredicted RBP8.08□□□□□ -1.12
CDCA3-205ENST00000535871 CWF19L2Q2TBE0 894 aaKnown RBP8.08□□□□□ -1.12
CDCA3-205ENST00000535871 SLC10A5Q5PT55 438 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 B4GALNT3Q6L9W6 998 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 ERC1Q8IUD2 1116 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 SIRT2Q8IXJ6 389 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 ZBTB3Q9H5J0 574 aa8.08□□□□□ -1.12
CDCA3-205ENST00000535871 AFDNP55196 1824 aaKnown RBP8.08□□□□□ -1.12
CDCA3-205ENST00000535871 SH3TC1Q8TE82 1336 aa8.07□□□□□ -1.12
CDCA3-205ENST00000535871 CSF1RP07333 972 aa8.07□□□□□ -1.12
CDCA3-205ENST00000535871 RFC4P35249 363 aa8.07□□□□□ -1.12
CDCA3-205ENST00000535871 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
CDCA3-205ENST00000535871 EFCAB3Q8N7B9 438 aa8.07□□□□□ -1.12
CDCA3-205ENST00000535871 UTP14AQ9BVJ6 771 aaKnown RBP8.07□□□□□ -1.12
CDCA3-205ENST00000535871 COPRSQ9NQ92 184 aa8.07□□□□□ -1.12
CDCA3-205ENST00000535871 LRRFIP2Q9Y608 721 aaKnown RBP8.07□□□□□ -1.12
CDCA3-205ENST00000535871 COL24A1Q17RW2 1714 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
CDCA3-205ENST00000535871 IGHDP01880 384 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 PIP4K2AP48426 406 aaPredicted RBP8.06□□□□□ -1.12
CDCA3-205ENST00000535871 NUCB1Q02818 461 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 HLFQ16534 295 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 TPTE2Q6XPS3 522 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 FBXO22Q8NEZ5 403 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 SLC16A10Q8TF71 515 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 KAZALD1Q96I82 304 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 SETDB2Q96T68 719 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
CDCA3-205ENST00000535871 TBC1D2BQ9UPU7 963 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 CARMIL3Q8ND23 1372 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 C4AP0C0L4 1744 aa8.06□□□□□ -1.12
CDCA3-205ENST00000535871 LAMB2P55268 1798 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 SRGAP3O43295 1099 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 PDE8AO60658 829 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 CIAO1O76071 339 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 PDE4AP27815 886 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 FOXO4P98177 505 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 SF3B3Q15393 1217 aaKnown RBP8.05□□□□□ -1.12
CDCA3-205ENST00000535871 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 UBE3BQ7Z3V4 1068 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 TICAM2Q86XR7 235 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 KIF1BPQ96EK5 621 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 SUCLG2Q96I99 432 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 BICC1Q9H694 974 aaKnown RBP8.05□□□□□ -1.12
CDCA3-205ENST00000535871 BCL2L12Q9HB09 334 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 TRMT112Q9UI30 125 aaKnown RBP8.05□□□□□ -1.12
CDCA3-205ENST00000535871 PDZRN3Q9UPQ7 1066 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 NIP7Q9Y221 180 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDCA3-205ENST00000535871 ZNF330Q9Y3S2 320 aaPredicted RBP8.05□□□□□ -1.12
CDCA3-205ENST00000535871 MYH3P11055 1940 aa8.05□□□□□ -1.12
CDCA3-205ENST00000535871 UBN2Q6ZU65 1347 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
CDCA3-205ENST00000535871 NTSR2O95665 410 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 GYS1P13807 737 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 TM4SF1P30408 202 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 SLC15A2Q16348 729 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 CHD1LQ86WJ1 897 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 GPR108Q9NPR9 543 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 STK32BQ9NY57 414 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 PODXL2Q9NZ53 605 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 TFCP2L1Q9NZI6 479 aa8.04□□□□□ -1.12
CDCA3-205ENST00000535871 AOX1Q06278 1338 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 PNMA6EA0A0J9YXQ4 647 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 KLRG2A4D1S0 409 aaPredicted RBP8.03□□□□□ -1.12
CDCA3-205ENST00000535871 IRS4O14654 1257 aaPredicted RBP8.03□□□□□ -1.12
CDCA3-205ENST00000535871 CTSWP56202 376 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 CCDC152Q4G0S7 254 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 SUSD4Q5VX71 490 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 KRI1Q8N9T8 703 aaKnown RBP8.03□□□□□ -1.12
CDCA3-205ENST00000535871 LRRCC1Q9C099 1032 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 OSBPL3Q9H4L5 887 aa8.03□□□□□ -1.12
CDCA3-205ENST00000535871 IL15P40933 162 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-205ENST00000535871 RFX5P48382 616 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-205ENST00000535871 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
CDCA3-205ENST00000535871 IFIT5Q13325 482 aaKnown RBP8.02□□□□□ -1.13
CDCA3-205ENST00000535871 CCDC57Q2TAC2 916 aa8.02□□□□□ -1.13
CDCA3-205ENST00000535871 TBC1D9BQ66K14 1250 aa8.02□□□□□ -1.13
CDCA3-205ENST00000535871 LMBR1LQ6UX01 489 aa8.02□□□□□ -1.13
CDCA3-205ENST00000535871 TTLL11Q8NHH1 800 aa8.02□□□□□ -1.13
CDCA3-205ENST00000535871 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
CDCA3-205ENST00000535871 GPBP1L1Q9HC44 474 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-205ENST00000535871 FARP1Q9Y4F1 1045 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-205ENST00000535871 NRXN2Q9P2S2 1712 aa8.02□□□□□ -1.13
CDCA3-205ENST00000535871 PNPLA7Q6ZV29 1317 aa8.02□□□□□ -1.13
CDCA3-205ENST00000535871 IGSF3O75054 1194 aa8.01□□□□□ -1.13
CDCA3-205ENST00000535871 SURF6O75683 361 aaKnown RBP8.01□□□□□ -1.13
CDCA3-205ENST00000535871 GPTP24298 496 aa8.01□□□□□ -1.13
CDCA3-205ENST00000535871 KCNQ4P56696 695 aa8.01□□□□□ -1.13
CDCA3-205ENST00000535871 EN1Q05925 392 aaPredicted RBP8.01□□□□□ -1.13
CDCA3-205ENST00000535871 G3BP1Q13283 466 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDCA3-205ENST00000535871 NFIXQ14938 502 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms