RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
CHFR-210ENST00000535527 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
CHFR-210ENST00000535527 PCCAP05165 728 aaPredicted RBP16.68■□□□□ 0.26
CHFR-210ENST00000535527 PPP1R42Q7Z4L9 355 aa16.68■□□□□ 0.26
CHFR-210ENST00000535527 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
CHFR-210ENST00000535527 RNF123Q5XPI4 1314 aa16.68■□□□□ 0.26
CHFR-210ENST00000535527 TIAM2Q8IVF5 1701 aa16.67■□□□□ 0.26
CHFR-210ENST00000535527 H7C1W4 665 aa16.67■□□□□ 0.26
CHFR-210ENST00000535527 RLBP1P12271 317 aa16.67■□□□□ 0.26
CHFR-210ENST00000535527 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
CHFR-210ENST00000535527 OLFM4Q6UX06 510 aa16.67■□□□□ 0.26
CHFR-210ENST00000535527 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
CHFR-210ENST00000535527 RASSF7Q02833 373 aa16.66■□□□□ 0.26
CHFR-210ENST00000535527 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
CHFR-210ENST00000535527 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
CHFR-210ENST00000535527 UBE3BQ7Z3V4 1068 aa16.66■□□□□ 0.26
CHFR-210ENST00000535527 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
CHFR-210ENST00000535527 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
CHFR-210ENST00000535527 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
CHFR-210ENST00000535527 CDHR2Q9BYE9 1310 aa16.66■□□□□ 0.26
CHFR-210ENST00000535527 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
CHFR-210ENST00000535527 COL4A5P29400 1685 aa16.65■□□□□ 0.26
CHFR-210ENST00000535527 NPHP1O15259 732 aa16.64■□□□□ 0.25
CHFR-210ENST00000535527 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
CHFR-210ENST00000535527 PDE6BP35913 854 aa16.64■□□□□ 0.25
CHFR-210ENST00000535527 TTLL6Q8N841 843 aa16.64■□□□□ 0.25
CHFR-210ENST00000535527 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
CHFR-210ENST00000535527 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
CHFR-210ENST00000535527 POTECB2RU33 542 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 H0YIN7 160 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 PLIN1O60240 522 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
CHFR-210ENST00000535527 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
CHFR-210ENST00000535527 ZNF622Q969S3 477 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHFR-210ENST00000535527 CLUAP1Q96AJ1 413 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 CCDC85AQ96PX6 553 aaPredicted RBP16.63■□□□□ 0.25
CHFR-210ENST00000535527 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 UTYO14607 1347 aa16.63■□□□□ 0.25
CHFR-210ENST00000535527 GRM8O00222 908 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
CHFR-210ENST00000535527 FOXO4P98177 505 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 MASTLQ96GX5 879 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 USP44Q9H0E7 712 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 PRDM10Q9NQV6 1147 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
CHFR-210ENST00000535527 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
CHFR-210ENST00000535527 SLC34A2O95436 690 aa16.61■□□□□ 0.25
CHFR-210ENST00000535527 NPR1P16066 1061 aa16.61■□□□□ 0.25
CHFR-210ENST00000535527 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
CHFR-210ENST00000535527 C20orf194Q5TEA3 1177 aa16.61■□□□□ 0.25
CHFR-210ENST00000535527 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
CHFR-210ENST00000535527 ARHGAP45Q92619 1136 aa16.61■□□□□ 0.25
CHFR-210ENST00000535527 CELF1Q92879 486 aaKnown RBP16.61■□□□□ 0.25
CHFR-210ENST00000535527 API5Q9BZZ5 524 aaKnown RBP16.61■□□□□ 0.25
CHFR-210ENST00000535527 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
CHFR-210ENST00000535527 CTSWP56202 376 aa16.6■□□□□ 0.25
CHFR-210ENST00000535527 ANKRD44Q8N8A2 993 aa16.6■□□□□ 0.25
CHFR-210ENST00000535527 MEIS3Q99687 375 aa16.6■□□□□ 0.25
CHFR-210ENST00000535527 PLA2G12BQ9BX93 195 aa16.6■□□□□ 0.25
CHFR-210ENST00000535527 NFKBIEO00221 500 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 PDE8AO60658 829 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 FAM161AQ3B820 660 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
CHFR-210ENST00000535527 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 TTLL11Q8NHH1 800 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 GREM2Q9H772 168 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
CHFR-210ENST00000535527 C21orf2O43822 256 aa16.58■□□□□ 0.24
CHFR-210ENST00000535527 CRAMP1Q96RY5 1269 aa16.58■□□□□ 0.24
CHFR-210ENST00000535527 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
CHFR-210ENST00000535527 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
CHFR-210ENST00000535527 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
CHFR-210ENST00000535527 CNTNAP1P78357 1384 aa16.56■□□□□ 0.24
CHFR-210ENST00000535527 FOXN1O15353 648 aa16.56■□□□□ 0.24
CHFR-210ENST00000535527 CSF1RP07333 972 aa16.56■□□□□ 0.24
CHFR-210ENST00000535527 CTCFP49711 727 aaPredicted RBP16.56■□□□□ 0.24
CHFR-210ENST00000535527 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
CHFR-210ENST00000535527 SCN9AQ15858 1988 aa16.55■□□□□ 0.24
CHFR-210ENST00000535527 CCT4P50991 539 aaKnown RBP16.55■□□□□ 0.24
CHFR-210ENST00000535527 GRAPQ13588 217 aa16.55■□□□□ 0.24
CHFR-210ENST00000535527 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
CHFR-210ENST00000535527 CNKSR1Q969H4 720 aa16.55■□□□□ 0.24
CHFR-210ENST00000535527 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
CHFR-210ENST00000535527 WTIPA6NIX2 430 aaPredicted RBP16.54■□□□□ 0.24
CHFR-210ENST00000535527 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
CHFR-210ENST00000535527 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
CHFR-210ENST00000535527 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
CHFR-210ENST00000535527 C9orf78Q9NZ63 289 aaPredicted RBP16.54■□□□□ 0.24
CHFR-210ENST00000535527 LTBP3Q9NS15 1303 aa16.53■□□□□ 0.24
CHFR-210ENST00000535527 LMBR1LQ6UX01 489 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms