RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ECE1P42892 770 aa17.09■□□□□ 0.33
CLSTN3-205ENST00000535452 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
CLSTN3-205ENST00000535452 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
CLSTN3-205ENST00000535452 CNTNAP1P78357 1384 aa17.09■□□□□ 0.33
CLSTN3-205ENST00000535452 APAF1O14727 1248 aa17.08■□□□□ 0.32
CLSTN3-205ENST00000535452 DEFB115Q30KQ5 88 aa17.08■□□□□ 0.32
CLSTN3-205ENST00000535452 LRP10Q7Z4F1 713 aa17.08■□□□□ 0.32
CLSTN3-205ENST00000535452 STK31Q9BXU1 1019 aa17.08■□□□□ 0.32
CLSTN3-205ENST00000535452 MBIPQ9NS73 344 aa17.08■□□□□ 0.32
CLSTN3-205ENST00000535452 NSFL1CQ9UNZ2 370 aaKnown RBP17.08■□□□□ 0.32
CLSTN3-205ENST00000535452 CDHR2Q9BYE9 1310 aa17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 H7C1D1 291 aa17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 COL13A1Q5TAT6 717 aaPredicted RBP17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 CCDC30Q5VVM6 783 aa17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
CLSTN3-205ENST00000535452 CAPN15O75808 1086 aa17.06■□□□□ 0.32
CLSTN3-205ENST00000535452 MAP2K1Q02750 393 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-205ENST00000535452 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
CLSTN3-205ENST00000535452 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
CLSTN3-205ENST00000535452 WASHC4Q2M389 1173 aa17.06■□□□□ 0.32
CLSTN3-205ENST00000535452 FAM89AQ96GI7 184 aa17.06■□□□□ 0.32
CLSTN3-205ENST00000535452 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-205ENST00000535452 ANKRD36CQ5JPF3 1778 aa17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 ITGBL1O95965 494 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 EPS15P42566 896 aa17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 SCNN1DP51172 638 aa17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 GPRC5DQ9NZD1 345 aa17.05■□□□□ 0.32
CLSTN3-205ENST00000535452 CXCL9Q07325 125 aa17.04■□□□□ 0.32
CLSTN3-205ENST00000535452 GRM1Q13255 1194 aa17.04■□□□□ 0.32
CLSTN3-205ENST00000535452 CCDC152Q4G0S7 254 aa17.04■□□□□ 0.32
CLSTN3-205ENST00000535452 ISCA1Q9BUE6 129 aa17.04■□□□□ 0.32
CLSTN3-205ENST00000535452 RAD17O75943 681 aa17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 VEGFBP49765 207 aa17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 GMPSP49915 693 aaPredicted RBP17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 SF3B3Q15393 1217 aaKnown RBP17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 ZBTB38Q8NAP3 1195 aaPredicted RBP17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 ZNF428Q96B54 188 aa17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 MYD88Q99836 296 aa17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 CWC25Q9NXE8 425 aaPredicted RBP17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 ANKIB1Q9P2G1 1089 aa17.03■□□□□ 0.32
CLSTN3-205ENST00000535452 RASSF10A6NK89 507 aa17.02■□□□□ 0.32
CLSTN3-205ENST00000535452 TRIM28Q13263 835 aaKnown RBP17.02■□□□□ 0.32
CLSTN3-205ENST00000535452 CCDC191Q8NCU4 936 aa17.02■□□□□ 0.32
CLSTN3-205ENST00000535452 SNED1Q8TER0 1413 aa17.02■□□□□ 0.31
CLSTN3-205ENST00000535452 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
CLSTN3-205ENST00000535452 RPS8P62241 208 aaKnown RBP17.01■□□□□ 0.31
CLSTN3-205ENST00000535452 ZC3H15Q8WU90 426 aaKnown RBP17.01■□□□□ 0.31
CLSTN3-205ENST00000535452 RIMBP2O15034 1052 aa17■□□□□ 0.31
CLSTN3-205ENST00000535452 ANP32CO43423 234 aa17■□□□□ 0.31
CLSTN3-205ENST00000535452 CDC37L1Q7L3B6 337 aa17■□□□□ 0.31
CLSTN3-205ENST00000535452 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
CLSTN3-205ENST00000535452 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
CLSTN3-205ENST00000535452 CNOT7Q9UIV1 285 aaKnown RBP17■□□□□ 0.31
CLSTN3-205ENST00000535452 PDE8AO60658 829 aa16.99■□□□□ 0.31
CLSTN3-205ENST00000535452 RPS12P25398 132 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-205ENST00000535452 CDC5LQ99459 802 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-205ENST00000535452 CELF2O95319 508 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 ZNF853P0CG23 659 aa16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 ANKRD18AQ8IVF6 992 aa16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 DCPSQ96C86 337 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 DBNDD1Q9H9R9 158 aa16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 GGA1Q9UJY5 639 aa16.98■□□□□ 0.31
CLSTN3-205ENST00000535452 UFL1O94874 794 aa16.97■□□□□ 0.31
CLSTN3-205ENST00000535452 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
CLSTN3-205ENST00000535452 DPF2Q92785 391 aa16.97■□□□□ 0.31
CLSTN3-205ENST00000535452 CAPNS2Q96L46 248 aa16.97■□□□□ 0.31
CLSTN3-205ENST00000535452 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
CLSTN3-205ENST00000535452 PHAXQ9H814 394 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-205ENST00000535452 FOXN1O15353 648 aa16.96■□□□□ 0.31
CLSTN3-205ENST00000535452 ECE2O60344 883 aa16.96■□□□□ 0.31
CLSTN3-205ENST00000535452 GPR101Q96P66 508 aaPredicted RBP16.96■□□□□ 0.31
CLSTN3-205ENST00000535452 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
CLSTN3-205ENST00000535452 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
CLSTN3-205ENST00000535452 ADAMTSL1Q8N6G6 1762 aa16.95■□□□□ 0.3
CLSTN3-205ENST00000535452 GPSM2P81274 684 aa16.95■□□□□ 0.3
CLSTN3-205ENST00000535452 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
CLSTN3-205ENST00000535452 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
CLSTN3-205ENST00000535452 WBP1LQ9NX94 342 aa16.95■□□□□ 0.3
CLSTN3-205ENST00000535452 TLL2Q9Y6L7 1015 aa16.95■□□□□ 0.3
CLSTN3-205ENST00000535452 LAMB2P55268 1798 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 COL4A5P29400 1685 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 TRAF5O00463 557 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 CA12O43570 354 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 MAP2K2P36507 400 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 RBM26Q5T8P6 1007 aaKnown RBP16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms