RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 TRAF5O00463 557 aa24.07■■□□□ 1.44
OTUB1-205ENST00000535140 CTCFP49711 727 aaPredicted RBP24.07■■□□□ 1.44
OTUB1-205ENST00000535140 GRAPQ13588 217 aa24.07■■□□□ 1.44
OTUB1-205ENST00000535140 GRAPLQ8TC17 118 aaPredicted RBP24.07■■□□□ 1.44
OTUB1-205ENST00000535140 DDX60Q8IY21 1712 aaKnown RBP24.07■■□□□ 1.44
OTUB1-205ENST00000535140 GMPSP49915 693 aaPredicted RBP24.06■■□□□ 1.44
OTUB1-205ENST00000535140 PAXIP1Q6ZW49 1069 aaPredicted RBP24.06■■□□□ 1.44
OTUB1-205ENST00000535140 ADARB2Q9NS39 739 aaKnown RBP24.06■■□□□ 1.44
OTUB1-205ENST00000535140 WBP1LQ9NX94 342 aa24.06■■□□□ 1.44
OTUB1-205ENST00000535140 ADAMTS8Q9UP79 889 aa24.06■■□□□ 1.44
OTUB1-205ENST00000535140 WDR33Q9C0J8 1336 aaKnown RBP24.06■■□□□ 1.44
OTUB1-205ENST00000535140 DUOX1Q9NRD9 1551 aa24.05■■□□□ 1.44
OTUB1-205ENST00000535140 KIAA2012Q0VF49 1180 aa24.05■■□□□ 1.44
OTUB1-205ENST00000535140 PLBD2Q8NHP8 589 aa24.05■■□□□ 1.44
OTUB1-205ENST00000535140 PRDM10Q9NQV6 1147 aa24.05■■□□□ 1.44
OTUB1-205ENST00000535140 ATP5J2-PTCD1G3V325 749 aa24.04■■□□□ 1.44
OTUB1-205ENST00000535140 RAD17O75943 681 aa24.04■■□□□ 1.44
OTUB1-205ENST00000535140 GRM1Q13255 1194 aa24.04■■□□□ 1.44
OTUB1-205ENST00000535140 CIAPIN1Q6FI81 312 aa24.04■■□□□ 1.44
OTUB1-205ENST00000535140 ANKRD13DQ6ZTN6 518 aa24.04■■□□□ 1.44
OTUB1-205ENST00000535140 DBF4Q9UBU7 674 aaPredicted RBP24.04■■□□□ 1.44
OTUB1-205ENST00000535140 TRPM7Q96QT4 1865 aa24.04■■□□□ 1.44
OTUB1-205ENST00000535140 LRRC37AA6NMS7 1700 aa24.04■■□□□ 1.44
OTUB1-205ENST00000535140 HOXB7P09629 217 aa24.03■■□□□ 1.44
OTUB1-205ENST00000535140 LBX1P52954 281 aa24.03■■□□□ 1.44
OTUB1-205ENST00000535140 FAM89AQ96GI7 184 aa24.03■■□□□ 1.44
OTUB1-205ENST00000535140 BCL2L13Q9BXK5 485 aa24.03■■□□□ 1.44
OTUB1-205ENST00000535140 RTL5Q5HYW3 569 aaPredicted RBP24.02■■□□□ 1.44
OTUB1-205ENST00000535140 CST9Q5W186 159 aa24.02■■□□□ 1.44
OTUB1-205ENST00000535140 ISCA1Q9BUE6 129 aa24.02■■□□□ 1.44
OTUB1-205ENST00000535140 DUSP27Q5VZP5 1158 aa24.01■■□□□ 1.43
OTUB1-205ENST00000535140 CAPNS2Q96L46 248 aa24.01■■□□□ 1.43
OTUB1-205ENST00000535140 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
OTUB1-205ENST00000535140 MBIPQ9NS73 344 aa24.01■■□□□ 1.43
OTUB1-205ENST00000535140 THSD7BQ9C0I4 1608 aa24■■□□□ 1.43
OTUB1-205ENST00000535140 COL4A1P02462 1669 aa24■■□□□ 1.43
OTUB1-205ENST00000535140 YDJCA8MPS7 323 aa24■■□□□ 1.43
OTUB1-205ENST00000535140 CYP4F22Q6NT55 531 aa24■■□□□ 1.43
OTUB1-205ENST00000535140 TMC4Q7Z404 712 aa24■■□□□ 1.43
OTUB1-205ENST00000535140 CELF1Q92879 486 aaKnown RBP24■■□□□ 1.43
OTUB1-205ENST00000535140 HSPA8P11142 646 aaKnown RBP23.99■■□□□ 1.43
OTUB1-205ENST00000535140 MAP2K1Q02750 393 aaPredicted RBP23.99■■□□□ 1.43
OTUB1-205ENST00000535140 TNIP1Q15025 636 aa23.99■■□□□ 1.43
OTUB1-205ENST00000535140 GLIS2Q9BZE0 524 aaPredicted RBP23.99■■□□□ 1.43
OTUB1-205ENST00000535140 HYPKQ9NX55 129 aa23.99■■□□□ 1.43
OTUB1-205ENST00000535140 CDHR2Q9BYE9 1310 aa23.99■■□□□ 1.43
OTUB1-205ENST00000535140 SHTN1A0MZ66 631 aa23.98■■□□□ 1.43
OTUB1-205ENST00000535140 NSFL1CQ9UNZ2 370 aaKnown RBP23.98■■□□□ 1.43
OTUB1-205ENST00000535140 TLL2Q9Y6L7 1015 aa23.98■■□□□ 1.43
OTUB1-205ENST00000535140 CELF2O95319 508 aaKnown RBP23.97■■□□□ 1.43
OTUB1-205ENST00000535140 ECE1P42892 770 aa23.97■■□□□ 1.43
OTUB1-205ENST00000535140 SF3B3Q15393 1217 aaKnown RBP23.97■■□□□ 1.43
OTUB1-205ENST00000535140 TRPM4Q8TD43 1214 aa23.97■■□□□ 1.43
OTUB1-205ENST00000535140 HIRAP54198 1017 aaPredicted RBP23.96■■□□□ 1.43
OTUB1-205ENST00000535140 ZNF408Q9H9D4 720 aa23.96■■□□□ 1.43
OTUB1-205ENST00000535140 DBNDD1Q9H9R9 158 aa23.96■■□□□ 1.43
OTUB1-205ENST00000535140 ELL2O00472 640 aaPredicted RBP23.95■■□□□ 1.42
OTUB1-205ENST00000535140 IRS4O14654 1257 aaPredicted RBP23.95■■□□□ 1.42
OTUB1-205ENST00000535140 RIMBP2O15034 1052 aa23.95■■□□□ 1.42
OTUB1-205ENST00000535140 WASHC4Q2M389 1173 aa23.95■■□□□ 1.42
OTUB1-205ENST00000535140 RIC3Q7Z5B4 369 aa23.95■■□□□ 1.42
OTUB1-205ENST00000535140 GPR101Q96P66 508 aaPredicted RBP23.95■■□□□ 1.42
OTUB1-205ENST00000535140 PRKRIP1Q9H875 184 aaPredicted RBP23.95■■□□□ 1.42
OTUB1-205ENST00000535140 CNOT7Q9UIV1 285 aaKnown RBP23.95■■□□□ 1.42
OTUB1-205ENST00000535140 ZBTB12Q9Y330 459 aaPredicted RBP23.95■■□□□ 1.42
OTUB1-205ENST00000535140 C6orf229H3BNL8 230 aa23.94■■□□□ 1.42
OTUB1-205ENST00000535140 APAF1O14727 1248 aa23.94■■□□□ 1.42
OTUB1-205ENST00000535140 GPSM2P81274 684 aa23.94■■□□□ 1.42
OTUB1-205ENST00000535140 MICALL2Q8IY33 904 aa23.94■■□□□ 1.42
OTUB1-205ENST00000535140 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
OTUB1-205ENST00000535140 ZNF853P0CG23 659 aa23.93■■□□□ 1.42
OTUB1-205ENST00000535140 GOLGA2Q08379 1002 aa23.93■■□□□ 1.42
OTUB1-205ENST00000535140 POLLQ9UGP5 575 aa23.93■■□□□ 1.42
OTUB1-205ENST00000535140 PGAP2Q9UHJ9 254 aa23.93■■□□□ 1.42
OTUB1-205ENST00000535140 H7C1D1 291 aa23.92■■□□□ 1.42
OTUB1-205ENST00000535140 PSMD14O00487 310 aa23.92■■□□□ 1.42
OTUB1-205ENST00000535140 AOC2O75106 756 aa23.92■■□□□ 1.42
OTUB1-205ENST00000535140 SAPCD2Q86UD0 394 aa23.92■■□□□ 1.42
OTUB1-205ENST00000535140 ZC3H15Q8WU90 426 aaKnown RBP23.92■■□□□ 1.42
OTUB1-205ENST00000535140 BEGAINQ9BUH8 593 aa23.92■■□□□ 1.42
OTUB1-205ENST00000535140 TRIM28Q13263 835 aaKnown RBP23.91■■□□□ 1.42
OTUB1-205ENST00000535140 MYD88Q99836 296 aa23.91■■□□□ 1.42
OTUB1-205ENST00000535140 IFT57Q9NWB7 429 aa23.91■■□□□ 1.42
OTUB1-205ENST00000535140 GNAI1P63096 354 aa23.9■■□□□ 1.42
OTUB1-205ENST00000535140 DOK7Q18PE1 504 aa23.9■■□□□ 1.42
OTUB1-205ENST00000535140 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
OTUB1-205ENST00000535140 SAMD7Q7Z3H4 446 aa23.9■■□□□ 1.42
OTUB1-205ENST00000535140 ECE2O60344 883 aa23.89■■□□□ 1.41
OTUB1-205ENST00000535140 RPS8P62241 208 aaKnown RBP23.89■■□□□ 1.41
OTUB1-205ENST00000535140 ZBTB38Q8NAP3 1195 aaPredicted RBP23.89■■□□□ 1.41
OTUB1-205ENST00000535140 EYA3Q99504 573 aa23.89■■□□□ 1.41
OTUB1-205ENST00000535140 SEC31BQ9NQW1 1179 aa23.89■■□□□ 1.41
OTUB1-205ENST00000535140 KCNQ5Q9NR82 932 aa23.89■■□□□ 1.41
OTUB1-205ENST00000535140 TSKSQ9UJT2 592 aa23.89■■□□□ 1.41
OTUB1-205ENST00000535140 CALD1Q05682 793 aaKnown RBP23.88■■□□□ 1.41
OTUB1-205ENST00000535140 TBC1D10BQ4KMP7 808 aaPredicted RBP23.88■■□□□ 1.41
OTUB1-205ENST00000535140 DLK2Q6UY11 383 aa23.88■■□□□ 1.41
OTUB1-205ENST00000535140 USP48Q86UV5 1035 aa23.88■■□□□ 1.41
OTUB1-205ENST00000535140 TBC1D16Q8TBP0 767 aa23.88■■□□□ 1.41
OTUB1-205ENST00000535140 JARID2Q92833 1246 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms