RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 TBC1D32Q96NH3 1257 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 ASAP1Q9ULH1 1129 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 EXOC6BQ9Y2D4 811 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 NOP58Q9Y2X3 529 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 COL5A3P25940 1745 aaPredicted RBP6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 A1BGP04217 495 aa6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 GSPT1P15170 499 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 KCNQ4P56696 695 aa6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 RABL6Q3YEC7 729 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 KIF6Q6ZMV9 814 aa6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 DNAJC10Q8IXB1 793 aa6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 BICC1Q9H694 974 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 STAP2Q9UGK3 403 aa6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 C10orf71Q711Q0 1435 aa6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 USP42Q9H9J4 1324 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 BCORQ6W2J9 1755 aa6.72□□□□□ -1.33
NPIPB3-206ENST00000534903 BTAF1O14981 1849 aa6.71□□□□□ -1.33
NPIPB3-206ENST00000534903 WDR90Q96KV7 1748 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 SMARCA5O60264 1052 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 SURF6O75683 361 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 MX1P20591 662 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 PIP4K2AP48426 406 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 PDE1AP54750 535 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 TGFB2P61812 414 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 HSP90AB3PQ58FF7 597 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 CASC1Q6TDU7 716 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 TBC1D9Q6ZT07 1266 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 ERICH6Q7L0X2 663 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 CCDC191Q8NCU4 936 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 SMC1BQ8NDV3 1235 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 RHPN1Q8TCX5 695 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 SMARCC1Q92922 1105 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 SYTL4Q96C24 671 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 CWC25Q9NXE8 425 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 MAP3K15Q6ZN16 1313 aa6.71□□□□□ -1.34
NPIPB3-206ENST00000534903 PALLDQ8WX93 1383 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 APBB1O00213 710 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 SEC24BO95487 1268 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 CYP19A1P11511 503 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 IL6STP40189 918 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 MFAP1P55081 439 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 CASP7P55210 303 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 OS9Q13438 667 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 TTLL7Q6ZT98 887 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 OTUD7AQ8TE49 926 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 KAZALD1Q96I82 304 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 ISCA1Q9BUE6 129 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 PRDM10Q9NQV6 1147 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 SCN7AQ01118 1682 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 TTC41PQ6P2S7 1318 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
NPIPB3-206ENST00000534903 LAMB2P55268 1798 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 A0A087WZG4 1122 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 LOC102724428A0A0B4J2F2 783 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 ERVV-1B6SEH8 477 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 H7C1W4 665 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 SDSP20132 328 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 SIK1P57059 783 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 GIGYF2Q6Y7W6 1299 aaKnown RBP6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 UBE3BQ7Z3V4 1068 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 CLASRPQ8N2M8 674 aaKnown RBP6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 GPATCH3Q96I76 525 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 SLC4A9Q96Q91 983 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 C22orf23Q9BZE7 217 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 ZBTB3Q9H5J0 574 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 ZBTB1Q9Y2K1 713 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 CDHR2Q9BYE9 1310 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 NUP98P52948 1817 aa6.69□□□□□ -1.34
NPIPB3-206ENST00000534903 PCNTO95613 3336 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 MYH3P11055 1940 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 LY75O60449 1722 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 ATP5J2-PTCD1G3V325 749 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 ERC2O15083 957 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 RGL2O15211 777 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 PCCAP05165 728 aaPredicted RBP6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 SSFA2P28290 1259 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 G3BP1Q13283 466 aaKnown RBP eCLIP6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 BECN1Q14457 450 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 ARHGAP27Q6ZUM4 889 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 PLA2G12BQ9BX93 195 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 CCDC87Q9NVE4 849 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 BCS1LQ9Y276 419 aa6.68□□□□□ -1.34
NPIPB3-206ENST00000534903 EPB41L2O43491 1005 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 GLRX3O76003 335 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 REC8O95072 547 aa6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 IFIT2P09913 472 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 POTEJP0CG39 1038 aa6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 ATP6V1AP38606 617 aa6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 CRKLP46109 303 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 RFX5P48382 616 aaPredicted RBP6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 EPHA10Q5JZY3 1008 aa6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 C9orf131Q5VYM1 1079 aa6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 DZIP3Q86Y13 1208 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-206ENST00000534903 CNTROBQ8N137 903 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms