RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 FER1L6Q2WGJ9 1857 aa16.42■□□□□ 0.22
CCS-209ENST00000534763 ALDH1L1O75891 902 aa16.41■□□□□ 0.22
CCS-209ENST00000534763 PRELPP51888 382 aa16.41■□□□□ 0.22
CCS-209ENST00000534763 CCDC152Q4G0S7 254 aa16.41■□□□□ 0.22
CCS-209ENST00000534763 RTL5Q5HYW3 569 aaPredicted RBP16.41■□□□□ 0.22
CCS-209ENST00000534763 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
CCS-209ENST00000534763 F6X3S4 739 aa16.4■□□□□ 0.22
CCS-209ENST00000534763 CASP7P55210 303 aa16.4■□□□□ 0.22
CCS-209ENST00000534763 VPS33BQ9H267 617 aa16.4■□□□□ 0.22
CCS-209ENST00000534763 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
CCS-209ENST00000534763 CTSWP56202 376 aa16.39■□□□□ 0.21
CCS-209ENST00000534763 SMC4Q9NTJ3 1288 aa16.39■□□□□ 0.21
CCS-209ENST00000534763 RARSP54136 660 aaKnown RBP16.38■□□□□ 0.21
CCS-209ENST00000534763 UBE3BQ7Z3V4 1068 aa16.38■□□□□ 0.21
CCS-209ENST00000534763 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
CCS-209ENST00000534763 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
CCS-209ENST00000534763 GPBP1L1Q9HC44 474 aaPredicted RBP16.38■□□□□ 0.21
CCS-209ENST00000534763 SBF1O95248 1867 aa16.37■□□□□ 0.21
CCS-209ENST00000534763 RPS8P62241 208 aaKnown RBP16.37■□□□□ 0.21
CCS-209ENST00000534763 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
CCS-209ENST00000534763 SUPT20HQ8NEM7 779 aa16.37■□□□□ 0.21
CCS-209ENST00000534763 TTLL11Q8NHH1 800 aa16.37■□□□□ 0.21
CCS-209ENST00000534763 ARHGAP45Q92619 1136 aa16.37■□□□□ 0.21
CCS-209ENST00000534763 KDM2BQ8NHM5 1336 aa16.37■□□□□ 0.21
CCS-209ENST00000534763 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
CCS-209ENST00000534763 GRM8O00222 908 aa16.36■□□□□ 0.21
CCS-209ENST00000534763 CSF1RP07333 972 aa16.36■□□□□ 0.21
CCS-209ENST00000534763 SLC4A10Q6U841 1118 aa16.36■□□□□ 0.21
CCS-209ENST00000534763 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
CCS-209ENST00000534763 CELF1Q92879 486 aaKnown RBP16.36■□□□□ 0.21
CCS-209ENST00000534763 UTYO14607 1347 aa16.36■□□□□ 0.21
CCS-209ENST00000534763 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
CCS-209ENST00000534763 GLTPD2A6NH11 291 aa16.35■□□□□ 0.21
CCS-209ENST00000534763 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
CCS-209ENST00000534763 CDC5LQ99459 802 aaKnown RBP16.35■□□□□ 0.21
CCS-209ENST00000534763 BCL2L13Q9BXK5 485 aa16.35■□□□□ 0.21
CCS-209ENST00000534763 DPY19L2Q6NUT2 758 aa16.34■□□□□ 0.21
CCS-209ENST00000534763 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
CCS-209ENST00000534763 MPNDQ8N594 471 aa16.34■□□□□ 0.21
CCS-209ENST00000534763 API5Q9BZZ5 524 aaKnown RBP16.34■□□□□ 0.21
CCS-209ENST00000534763 SEC31BQ9NQW1 1179 aa16.34■□□□□ 0.21
CCS-209ENST00000534763 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
CCS-209ENST00000534763 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
CCS-209ENST00000534763 LRRC37AA6NMS7 1700 aa16.33■□□□□ 0.21
CCS-209ENST00000534763 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.2
CCS-209ENST00000534763 NOB1Q9ULX3 412 aaKnown RBP16.33■□□□□ 0.2
CCS-209ENST00000534763 FZD9O00144 591 aa16.32■□□□□ 0.2
CCS-209ENST00000534763 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
CCS-209ENST00000534763 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
CCS-209ENST00000534763 FOXO4P98177 505 aa16.32■□□□□ 0.2
CCS-209ENST00000534763 JDP2Q8WYK2 163 aa16.32■□□□□ 0.2
CCS-209ENST00000534763 GREM2Q9H772 168 aa16.32■□□□□ 0.2
CCS-209ENST00000534763 BSDC1Q9NW68 430 aaPredicted RBP16.32■□□□□ 0.2
CCS-209ENST00000534763 PODXL2Q9NZ53 605 aa16.32■□□□□ 0.2
CCS-209ENST00000534763 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
CCS-209ENST00000534763 TIAM2Q8IVF5 1701 aa16.31■□□□□ 0.2
CCS-209ENST00000534763 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
CCS-209ENST00000534763 KIAA2012Q0VF49 1180 aa16.3■□□□□ 0.2
CCS-209ENST00000534763 NSFL1CQ9UNZ2 370 aaKnown RBP16.3■□□□□ 0.2
CCS-209ENST00000534763 KIF3CO14782 793 aa16.29■□□□□ 0.2
CCS-209ENST00000534763 NBPF7P0C2Y1 421 aaPredicted RBP16.29■□□□□ 0.2
CCS-209ENST00000534763 ITGA6P23229 1130 aa16.29■□□□□ 0.2
CCS-209ENST00000534763 IGHMBP2P38935 993 aaKnown RBP16.29■□□□□ 0.2
CCS-209ENST00000534763 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
CCS-209ENST00000534763 LARGE2Q8N3Y3 721 aa16.29■□□□□ 0.2
CCS-209ENST00000534763 CCDC85AQ96PX6 553 aaPredicted RBP16.29■□□□□ 0.2
CCS-209ENST00000534763 USP44Q9H0E7 712 aa16.29■□□□□ 0.2
CCS-209ENST00000534763 COL4A1P02462 1669 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 MYH3P11055 1940 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 ANKRD18BA2A2Z9 1011 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 PPIP5K2O43314 1243 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 GPSM2P81274 684 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 IFIT5Q13325 482 aaKnown RBP16.28■□□□□ 0.2
CCS-209ENST00000534763 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 L3MBTL3Q96JM7 780 aaPredicted RBP16.28■□□□□ 0.2
CCS-209ENST00000534763 EYA3Q99504 573 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 HDAC5Q9UQL6 1122 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 DUOX1Q9NRD9 1551 aa16.28■□□□□ 0.2
CCS-209ENST00000534763 XDHP47989 1333 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 VEGFAP15692 232 aaPredicted RBP16.27■□□□□ 0.2
CCS-209ENST00000534763 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.2
CCS-209ENST00000534763 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
CCS-209ENST00000534763 LMBR1LQ6UX01 489 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 ATF7IPQ6VMQ6 1270 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 GPC2Q8N158 579 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 KAZALD1Q96I82 304 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 NMRK2Q9NPI5 230 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 MINPP1Q9UNW1 487 aa16.27■□□□□ 0.2
CCS-209ENST00000534763 LTBP1Q14766 1721 aa16.27■□□□□ 0.19
CCS-209ENST00000534763 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.19
CCS-209ENST00000534763 WDR90Q96KV7 1748 aa16.26■□□□□ 0.19
CCS-209ENST00000534763 BCAR3O75815 825 aa16.26■□□□□ 0.19
CCS-209ENST00000534763 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
CCS-209ENST00000534763 AOC3Q16853 763 aa16.26■□□□□ 0.19
CCS-209ENST00000534763 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
CCS-209ENST00000534763 CCDC57Q2TAC2 916 aa16.26■□□□□ 0.19
CCS-209ENST00000534763 EPHA10Q5JZY3 1008 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms