RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-222ENST00000534581 SF3B3Q15393 1217 aaKnown RBP21.41■■□□□ 1.02
C11orf49-222ENST00000534581 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
C11orf49-222ENST00000534581 TTLL6Q8N841 843 aa21.41■■□□□ 1.02
C11orf49-222ENST00000534581 BCS1LQ9Y276 419 aa21.41■■□□□ 1.02
C11orf49-222ENST00000534581 KCNA3P22001 575 aa21.4■■□□□ 1.02
C11orf49-222ENST00000534581 ALDH1B1P30837 517 aa21.4■■□□□ 1.02
C11orf49-222ENST00000534581 LMBR1LQ6UX01 489 aa21.39■■□□□ 1.01
C11orf49-222ENST00000534581 TTLL11Q8NHH1 800 aa21.39■■□□□ 1.01
C11orf49-222ENST00000534581 BICC1Q9H694 974 aaKnown RBP21.39■■□□□ 1.01
C11orf49-222ENST00000534581 DDX19BQ9UMR2 479 aa21.39■■□□□ 1.01
C11orf49-222ENST00000534581 GNAI2P04899 355 aa21.38■■□□□ 1.01
C11orf49-222ENST00000534581 HOXA10P31260 410 aaPredicted RBP21.38■■□□□ 1.01
C11orf49-222ENST00000534581 FOXO4P98177 505 aa21.38■■□□□ 1.01
C11orf49-222ENST00000534581 GPR162Q16538 588 aa21.38■■□□□ 1.01
C11orf49-222ENST00000534581 EPHA10Q5JZY3 1008 aa21.38■■□□□ 1.01
C11orf49-222ENST00000534581 CHMP4BQ9H444 224 aaKnown RBP21.38■■□□□ 1.01
C11orf49-222ENST00000534581 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
C11orf49-222ENST00000534581 LRRFIP2Q9Y608 721 aaKnown RBP21.38■■□□□ 1.01
C11orf49-222ENST00000534581 DCAF8L1A6NGE4 600 aa21.37■■□□□ 1.01
C11orf49-222ENST00000534581 CRAMP1Q96RY5 1269 aa21.37■■□□□ 1.01
C11orf49-222ENST00000534581 GREM2Q9H772 168 aa21.37■■□□□ 1.01
C11orf49-222ENST00000534581 ZBTB7BO15156 539 aaPredicted RBP21.36■■□□□ 1.01
C11orf49-222ENST00000534581 GRAPQ13588 217 aa21.36■■□□□ 1.01
C11orf49-222ENST00000534581 FAM161AQ3B820 660 aa21.36■■□□□ 1.01
C11orf49-222ENST00000534581 PRPF40BQ6NWY9 871 aaKnown RBP21.36■■□□□ 1.01
C11orf49-222ENST00000534581 GRAPLQ8TC17 118 aaPredicted RBP21.36■■□□□ 1.01
C11orf49-222ENST00000534581 TMX4Q9H1E5 349 aaPredicted RBP21.36■■□□□ 1.01
C11orf49-222ENST00000534581 SEC31BQ9NQW1 1179 aa21.36■■□□□ 1.01
C11orf49-222ENST00000534581 CSF1RP07333 972 aa21.35■■□□□ 1.01
C11orf49-222ENST00000534581 IFIT5Q13325 482 aaKnown RBP21.35■■□□□ 1.01
C11orf49-222ENST00000534581 CCDC57Q2TAC2 916 aa21.35■■□□□ 1.01
C11orf49-222ENST00000534581 TAF7LQ5H9L4 462 aa21.35■■□□□ 1.01
C11orf49-222ENST00000534581 KAZALD1Q96I82 304 aa21.35■■□□□ 1.01
C11orf49-222ENST00000534581 CDC5LQ99459 802 aaKnown RBP21.35■■□□□ 1.01
C11orf49-222ENST00000534581 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
C11orf49-222ENST00000534581 ANKRD18BA2A2Z9 1011 aa21.34■■□□□ 1.01
C11orf49-222ENST00000534581 PPEF1O14829 653 aaPredicted RBP21.34■■□□□ 1.01
C11orf49-222ENST00000534581 BBOX1O75936 387 aa21.34■■□□□ 1.01
C11orf49-222ENST00000534581 ITGA6P23229 1130 aa21.34■■□□□ 1.01
C11orf49-222ENST00000534581 ANKRD18AQ8IVF6 992 aa21.34■■□□□ 1.01
C11orf49-222ENST00000534581 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
C11orf49-222ENST00000534581 ANKRD44Q8N8A2 993 aa21.33■■□□□ 1.01
C11orf49-222ENST00000534581 CELF1Q92879 486 aaKnown RBP21.33■■□□□ 1.01
C11orf49-222ENST00000534581 C21orf2O43822 256 aa21.32■■□□□ 1
C11orf49-222ENST00000534581 IGHMBP2P38935 993 aaKnown RBP21.32■■□□□ 1
C11orf49-222ENST00000534581 RPS8P62241 208 aaKnown RBP21.32■■□□□ 1
C11orf49-222ENST00000534581 RABL6Q3YEC7 729 aaPredicted RBP21.32■■□□□ 1
C11orf49-222ENST00000534581 ANKRD31Q8N7Z5 1873 aa21.32■■□□□ 1
C11orf49-222ENST00000534581 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
C11orf49-222ENST00000534581 CRBNQ96SW2 442 aa21.31■■□□□ 1
C11orf49-222ENST00000534581 MPHOSPH8Q99549 860 aa21.31■■□□□ 1
C11orf49-222ENST00000534581 YBX3P16989 372 aaKnown RBP eCLIP21.3■■□□□ 1
C11orf49-222ENST00000534581 RTL9Q8NET4 1388 aa21.3■■□□□ 1
C11orf49-222ENST00000534581 N4BP2Q86UW6 1770 aaPredicted RBP21.29■■□□□ 1
C11orf49-222ENST00000534581 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
C11orf49-222ENST00000534581 SOGA3Q5TF21 947 aa21.29■■□□□ 1
C11orf49-222ENST00000534581 TMC4Q7Z404 712 aa21.29■■□□□ 1
C11orf49-222ENST00000534581 DDX60Q8IY21 1712 aaKnown RBP21.29■■□□□ 1
C11orf49-222ENST00000534581 SRGAP3O43295 1099 aa21.28■■□□□ 1
C11orf49-222ENST00000534581 ARHGAP27Q6ZUM4 889 aa21.28■■□□□ 1
C11orf49-222ENST00000534581 ZNF594Q96JF6 807 aaPredicted RBP21.28■■□□□ 1
C11orf49-222ENST00000534581 ZBTB40Q9NUA8 1239 aa21.28■■□□□ 1
C11orf49-222ENST00000534581 ATP6V0A2Q9Y487 856 aa21.28■■□□□ 1
C11orf49-222ENST00000534581 COL11A2P13942 1736 aaPredicted RBP21.27■■□□□ 1
C11orf49-222ENST00000534581 GRIN3BO60391 1043 aa21.27■■□□□ 1
C11orf49-222ENST00000534581 CCDC93Q567U6 631 aa21.27■■□□□ 1
C11orf49-222ENST00000534581 OLFM4Q6UX06 510 aa21.27■■□□□ 1
C11orf49-222ENST00000534581 CC2D2BQ6DHV5 1058 aa21.26■□□□□ 0.99
C11orf49-222ENST00000534581 SP8Q8IXZ3 490 aa21.26■□□□□ 0.99
C11orf49-222ENST00000534581 CNNM1Q9NRU3 951 aa21.26■□□□□ 0.99
C11orf49-222ENST00000534581 LDHAL6AQ6ZMR3 332 aa21.25■□□□□ 0.99
C11orf49-222ENST00000534581 C7orf43Q8WVR3 580 aa21.25■□□□□ 0.99
C11orf49-222ENST00000534581 KIAA1551Q9HCM1 1747 aa21.25■□□□□ 0.99
C11orf49-222ENST00000534581 BSDC1Q9NW68 430 aaPredicted RBP21.25■□□□□ 0.99
C11orf49-222ENST00000534581 LAMB2P55268 1798 aa21.24■□□□□ 0.99
C11orf49-222ENST00000534581 ATP8B2P98198 1209 aa21.24■□□□□ 0.99
C11orf49-222ENST00000534581 RTKN2Q8IZC4 609 aa21.24■□□□□ 0.99
C11orf49-222ENST00000534581 KLHDC4Q8TBB5 520 aa21.24■□□□□ 0.99
C11orf49-222ENST00000534581 ANKIB1Q9P2G1 1089 aa21.24■□□□□ 0.99
C11orf49-222ENST00000534581 CEP85Q6P2H3 762 aa21.23■□□□□ 0.99
C11orf49-222ENST00000534581 DPP8Q6V1X1 898 aaPredicted RBP21.23■□□□□ 0.99
C11orf49-222ENST00000534581 SLC51AQ86UW1 340 aa21.23■□□□□ 0.99
C11orf49-222ENST00000534581 NSFL1CQ9UNZ2 370 aaKnown RBP21.23■□□□□ 0.99
C11orf49-222ENST00000534581 PNMA6EA0A0J9YXQ4 647 aa21.22■□□□□ 0.99
C11orf49-222ENST00000534581 MTX1Q13505 466 aa21.22■□□□□ 0.99
C11orf49-222ENST00000534581 GRIPAP1Q4V328 841 aa21.22■□□□□ 0.99
C11orf49-222ENST00000534581 MPNDQ8N594 471 aa21.22■□□□□ 0.99
C11orf49-222ENST00000534581 EXOC6Q8TAG9 804 aa21.22■□□□□ 0.99
C11orf49-222ENST00000534581 SIL1Q9H173 461 aa21.22■□□□□ 0.99
C11orf49-222ENST00000534581 RFX5P48382 616 aaPredicted RBP21.21■□□□□ 0.99
C11orf49-222ENST00000534581 RPAP2Q8IXW5 612 aaPredicted RBP21.21■□□□□ 0.99
C11orf49-222ENST00000534581 TAOK3Q9H2K8 898 aa21.21■□□□□ 0.99
C11orf49-222ENST00000534581 MINPP1Q9UNW1 487 aa21.21■□□□□ 0.99
C11orf49-222ENST00000534581 PA2G4Q9UQ80 394 aaKnown RBP21.21■□□□□ 0.99
C11orf49-222ENST00000534581 HMMRO75330 724 aa21.2■□□□□ 0.98
C11orf49-222ENST00000534581 GPSM2P81274 684 aa21.2■□□□□ 0.98
C11orf49-222ENST00000534581 PTPN12Q05209 780 aaKnown RBP21.2■□□□□ 0.98
C11orf49-222ENST00000534581 PUS3Q9BZE2 481 aaKnown RBP21.2■□□□□ 0.98
C11orf49-222ENST00000534581 ANKRD2Q9GZV1 360 aa21.2■□□□□ 0.98
C11orf49-222ENST00000534581 RASSF7Q02833 373 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms