RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
RPS3-219ENST00000534440 APBB1O00213 710 aa12.49□□□□□ -0.41
RPS3-219ENST00000534440 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
RPS3-219ENST00000534440 NTSR2O95665 410 aa12.49□□□□□ -0.41
RPS3-219ENST00000534440 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
RPS3-219ENST00000534440 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
RPS3-219ENST00000534440 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
RPS3-219ENST00000534440 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.419e-40■■■■□ 25.2
RPS3-219ENST00000534440 ABCC12Q96J65 1359 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 RGL2O15211 777 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 SSFA2P28290 1259 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 OTUD7AQ8TE49 926 aaPredicted RBP12.48□□□□□ -0.41
RPS3-219ENST00000534440 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 COL4A1P02462 1669 aa12.48□□□□□ -0.41
RPS3-219ENST00000534440 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
RPS3-219ENST00000534440 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
RPS3-219ENST00000534440 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
RPS3-219ENST00000534440 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
RPS3-219ENST00000534440 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
RPS3-219ENST00000534440 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.41
RPS3-219ENST00000534440 SURF6O75683 361 aaKnown RBP12.46□□□□□ -0.41
RPS3-219ENST00000534440 HMGB2P26583 209 aaKnown RBP12.46□□□□□ -0.41
RPS3-219ENST00000534440 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
RPS3-219ENST00000534440 TRAPPC3LQ5T215 181 aa12.46□□□□□ -0.41
RPS3-219ENST00000534440 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
RPS3-219ENST00000534440 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
RPS3-219ENST00000534440 UTP14AQ9BVJ6 771 aaKnown RBP12.46□□□□□ -0.41
RPS3-219ENST00000534440 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
RPS3-219ENST00000534440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.46□□□□□ -0.41
RPS3-219ENST00000534440 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
RPS3-219ENST00000534440 SALL3Q9BXA9 1300 aa12.45□□□□□ -0.42
RPS3-219ENST00000534440 ZPR1O75312 459 aa12.45□□□□□ -0.42
RPS3-219ENST00000534440 GYS1P13807 737 aa12.45□□□□□ -0.42
RPS3-219ENST00000534440 RFC4P35249 363 aa12.45□□□□□ -0.42
RPS3-219ENST00000534440 CTSWP56202 376 aa12.45□□□□□ -0.42
RPS3-219ENST00000534440 PTPN12Q05209 780 aaKnown RBP12.45□□□□□ -0.42
RPS3-219ENST00000534440 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
RPS3-219ENST00000534440 CSF1RP07333 972 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
RPS3-219ENST00000534440 NFIXQ14938 502 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
RPS3-219ENST00000534440 LRRCC1Q9C099 1032 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 SIL1Q9H173 461 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 COPRSQ9NQ92 184 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 RIC1Q4ADV7 1423 aa12.44□□□□□ -0.42
RPS3-219ENST00000534440 RAB11FIP3O75154 756 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 SASH1O94885 1247 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 ERFEQ4G0M1 354 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 TTLL11Q8NHH1 800 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 BCL11AQ9H165 835 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 GREM2Q9H772 168 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
RPS3-219ENST00000534440 SPEF2Q9C093 1822 aa12.42□□□□□ -0.42
RPS3-219ENST00000534440 PDE8AO60658 829 aa12.42□□□□□ -0.42
RPS3-219ENST00000534440 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
RPS3-219ENST00000534440 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
RPS3-219ENST00000534440 CHD4Q14839 1912 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 DDR1Q08345 913 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 OS9Q13438 667 aaPredicted RBP12.41□□□□□ -0.42
RPS3-219ENST00000534440 TSHZ3Q63HK5 1081 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 SETDB2Q96T68 719 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 PUS3Q9BZE2 481 aaKnown RBP12.41□□□□□ -0.42
RPS3-219ENST00000534440 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
RPS3-219ENST00000534440 GSPT1P15170 499 aaKnown RBP12.4□□□□□ -0.42
RPS3-219ENST00000534440 ITGA6P23229 1130 aa12.4□□□□□ -0.42
RPS3-219ENST00000534440 C8orf34Q49A92 452 aa12.4□□□□□ -0.42
RPS3-219ENST00000534440 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
RPS3-219ENST00000534440 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
RPS3-219ENST00000534440 IFFO2Q5TF58 517 aa12.4□□□□□ -0.42
RPS3-219ENST00000534440 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
RPS3-219ENST00000534440 A0A1B0GUL6 1792 aa12.4□□□□□ -0.42
RPS3-219ENST00000534440 RTL9Q8NET4 1388 aa12.4□□□□□ -0.42
RPS3-219ENST00000534440 ZNF609O15014 1411 aa12.39□□□□□ -0.43
RPS3-219ENST00000534440 TM4SF1P30408 202 aa12.39□□□□□ -0.43
RPS3-219ENST00000534440 G3BP1Q13283 466 aaKnown RBP eCLIP12.39□□□□□ -0.435e-10■□□□□ 8.3
RPS3-219ENST00000534440 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
RPS3-219ENST00000534440 ERC1Q8IUD2 1116 aa12.39□□□□□ -0.43
RPS3-219ENST00000534440 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
RPS3-219ENST00000534440 TLR7Q9NYK1 1049 aaKnown RBP12.39□□□□□ -0.43
RPS3-219ENST00000534440 TAF1P21675 1872 aa12.39□□□□□ -0.43
RPS3-219ENST00000534440 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
RPS3-219ENST00000534440 EYA2O00167 538 aa12.38□□□□□ -0.43
RPS3-219ENST00000534440 POLRMTO00411 1230 aaKnown RBP12.38□□□□□ -0.43
RPS3-219ENST00000534440 CIAO1O76071 339 aa12.38□□□□□ -0.43
RPS3-219ENST00000534440 MX1P20591 662 aa12.38□□□□□ -0.43
RPS3-219ENST00000534440 PDE1AP54750 535 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms