RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TXLNBQ8N3L3 684 aa22.59■■□□□ 1.21
SMPD1-210ENST00000534405 SPG7Q9UQ90 795 aa22.59■■□□□ 1.21
SMPD1-210ENST00000534405 CCDC186Q7Z3E2 898 aa22.58■■□□□ 1.21
SMPD1-210ENST00000534405 C9orf78Q9NZ63 289 aaPredicted RBP22.58■■□□□ 1.21
SMPD1-210ENST00000534405 LRMPQ12912 555 aa22.58■■□□□ 1.2
SMPD1-210ENST00000534405 TRHP20396 242 aaPredicted RBP22.57■■□□□ 1.2
SMPD1-210ENST00000534405 TPD52L1Q16890 204 aaPredicted RBP22.57■■□□□ 1.2
SMPD1-210ENST00000534405 ALDH1L1O75891 902 aa22.57■■□□□ 1.2
SMPD1-210ENST00000534405 ELF2Q15723 593 aa22.57■■□□□ 1.2
SMPD1-210ENST00000534405 ICE2Q659A1 982 aa22.57■■□□□ 1.2
SMPD1-210ENST00000534405 TTC14Q96N46 770 aa22.57■■□□□ 1.2
SMPD1-210ENST00000534405 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.57■■□□□ 1.2
SMPD1-210ENST00000534405 TTC41PQ6P2S7 1318 aa22.56■■□□□ 1.2
SMPD1-210ENST00000534405 OVOS2A0A0G2JMS6 1433 aa22.56■■□□□ 1.2
SMPD1-210ENST00000534405 LOC102724159A0A0B4J2E5 919 aa22.56■■□□□ 1.2
SMPD1-210ENST00000534405 CASQ1P31415 396 aa22.56■■□□□ 1.2
SMPD1-210ENST00000534405 PWP2Q15269 919 aaKnown RBP22.56■■□□□ 1.2
SMPD1-210ENST00000534405 FOXD4L6Q3SYB3 417 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-210ENST00000534405 ZSCAN25Q6NSZ9 544 aa22.56■■□□□ 1.2
SMPD1-210ENST00000534405 GIMAP6Q6P9H5 292 aa22.56■■□□□ 1.2
SMPD1-210ENST00000534405 FOXD4L3Q6VB84 417 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-210ENST00000534405 LARP6Q9BRS8 491 aaKnown RBP22.56■■□□□ 1.2
SMPD1-210ENST00000534405 GLRX3O76003 335 aaKnown RBP22.56■■□□□ 1.2
SMPD1-210ENST00000534405 KAZALD1Q96I82 304 aa22.56■■□□□ 1.2
SMPD1-210ENST00000534405 ERBB3P21860 1342 aa22.55■■□□□ 1.2
SMPD1-210ENST00000534405 SIPA1L3O60292 1781 aaPredicted RBP22.55■■□□□ 1.2
SMPD1-210ENST00000534405 SYT10Q6XYQ8 523 aa22.55■■□□□ 1.2
SMPD1-210ENST00000534405 CLASRPQ8N2M8 674 aaKnown RBP22.55■■□□□ 1.2
SMPD1-210ENST00000534405 FHOD1Q9Y613 1164 aa22.55■■□□□ 1.2
SMPD1-210ENST00000534405 CAMTA1Q9Y6Y1 1673 aa22.55■■□□□ 1.2
SMPD1-210ENST00000534405 H2AFXP16104 143 aaPredicted RBP22.55■■□□□ 1.2
SMPD1-210ENST00000534405 BRMS1Q9HCU9 246 aa22.55■■□□□ 1.2
SMPD1-210ENST00000534405 TEX35Q5T0J7 233 aa22.54■■□□□ 1.2
SMPD1-210ENST00000534405 RGPD5Q99666 1765 aa22.54■■□□□ 1.2
SMPD1-210ENST00000534405 MYO1CO00159 1063 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 CPA1P15085 419 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 AK2P54819 239 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 SUCLG2Q96I99 432 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 MYCBPQ99417 103 aaPredicted RBP22.53■■□□□ 1.2
SMPD1-210ENST00000534405 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
SMPD1-210ENST00000534405 TRPM3Q9HCF6 1732 aaPredicted RBP22.53■■□□□ 1.2
SMPD1-210ENST00000534405 PTH1RQ03431 593 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 AIMP1Q12904 312 aaKnown RBP22.53■■□□□ 1.2
SMPD1-210ENST00000534405 PDIA6Q15084 440 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 RUFY3Q7L099 469 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 NCAPGQ9BPX3 1015 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.53■■□□□ 1.2
SMPD1-210ENST00000534405 CNPY2Q9Y2B0 182 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 V9GYY5 206 aaPredicted RBP22.53■■□□□ 1.2
SMPD1-210ENST00000534405 CCDC171Q6TFL3 1326 aa22.53■■□□□ 1.2
SMPD1-210ENST00000534405 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.52■■□□□ 1.2
SMPD1-210ENST00000534405 FAM200AQ8TCP9 573 aa22.52■■□□□ 1.2
SMPD1-210ENST00000534405 ECHDC1Q9NTX5 307 aa22.52■■□□□ 1.2
SMPD1-210ENST00000534405 CCDC192P0DO97 292 aa22.52■■□□□ 1.2
SMPD1-210ENST00000534405 KRT28Q7Z3Y7 464 aa22.52■■□□□ 1.2
SMPD1-210ENST00000534405 HYPKQ9NX55 129 aa22.52■■□□□ 1.2
SMPD1-210ENST00000534405 SLC39A6Q13433 755 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 LINS1Q8NG48 757 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 ZNF592Q92610 1267 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 GTF3C6Q969F1 213 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 ATG3Q9NT62 314 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 GRM8O00222 908 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 PLA2G4AP47712 749 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 NEK11Q8NG66 645 aa22.51■■□□□ 1.19
SMPD1-210ENST00000534405 BICC1Q9H694 974 aaKnown RBP22.51■■□□□ 1.19
SMPD1-210ENST00000534405 SASH1O94885 1247 aa22.5■■□□□ 1.19
SMPD1-210ENST00000534405 SLU7O95391 586 aaKnown RBP22.5■■□□□ 1.19
SMPD1-210ENST00000534405 NYAP1Q6ZVC0 841 aa22.5■■□□□ 1.19
SMPD1-210ENST00000534405 DDX21Q9NR30 783 aaKnown RBP eCLIP22.5■■□□□ 1.19
SMPD1-210ENST00000534405 ADAMTS7Q9UKP4 1686 aa22.5■■□□□ 1.19
SMPD1-210ENST00000534405 IFIT2P09913 472 aaKnown RBP22.5■■□□□ 1.19
SMPD1-210ENST00000534405 GUCY2CP25092 1073 aa22.5■■□□□ 1.19
SMPD1-210ENST00000534405 ZC3H6P61129 1189 aaKnown RBP22.5■■□□□ 1.19
SMPD1-210ENST00000534405 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
SMPD1-210ENST00000534405 AACSQ86V21 672 aa22.5■■□□□ 1.19
SMPD1-210ENST00000534405 ZNF622Q969S3 477 aaKnown RBP eCLIP22.5■■□□□ 1.19
SMPD1-210ENST00000534405 TCHHQ07283 1943 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 ADCK5Q3MIX3 580 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 NRBP1Q9UHY1 535 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 UTYO14607 1347 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 LARGE1O95461 756 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 APPP05067 770 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 IGKV5-2P06315 115 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 TPM4P67936 248 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 PLA2G4DQ86XP0 818 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 C10orf67Q8IYJ2 551 aa22.49■■□□□ 1.19
SMPD1-210ENST00000534405 TRIM66O15016 1216 aa22.48■■□□□ 1.19
SMPD1-210ENST00000534405 DTNBO60941 627 aa22.48■■□□□ 1.19
SMPD1-210ENST00000534405 PNMA6AP0CW24 399 aaPredicted RBP22.48■■□□□ 1.19
SMPD1-210ENST00000534405 CASTP20810 708 aaKnown RBP22.48■■□□□ 1.19
SMPD1-210ENST00000534405 EAF2Q96CJ1 260 aaPredicted RBP22.48■■□□□ 1.19
SMPD1-210ENST00000534405 TMX1Q9H3N1 280 aa22.48■■□□□ 1.19
SMPD1-210ENST00000534405 ERC1Q8IUD2 1116 aa22.48■■□□□ 1.19
SMPD1-210ENST00000534405 LIMCH1Q9UPQ0 1083 aa22.48■■□□□ 1.19
SMPD1-210ENST00000534405 ZNF75DP51815 510 aa22.47■■□□□ 1.19
SMPD1-210ENST00000534405 PTPN14Q15678 1187 aa22.47■■□□□ 1.19
SMPD1-210ENST00000534405 PRPF40BQ6NWY9 871 aaKnown RBP22.47■■□□□ 1.19
SMPD1-210ENST00000534405 ZNF790Q6PG37 636 aa22.47■■□□□ 1.19
SMPD1-210ENST00000534405 DRC7Q8IY82 874 aa22.47■■□□□ 1.19
SMPD1-210ENST00000534405 CACTINQ8WUQ7 758 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms