RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 HTRA3P83110 453 aa17.25■□□□□ 0.35
CAPN1-228ENST00000534373 WDR63Q8IWG1 891 aa17.25■□□□□ 0.35
CAPN1-228ENST00000534373 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
CAPN1-228ENST00000534373 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
CAPN1-228ENST00000534373 METTL22Q9BUU2 404 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-228ENST00000534373 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
CAPN1-228ENST00000534373 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
CAPN1-228ENST00000534373 LAMB2P55268 1798 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-228ENST00000534373 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 AOC3Q16853 763 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-228ENST00000534373 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 MYD88Q99836 296 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-228ENST00000534373 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
CAPN1-228ENST00000534373 LMOD1P29536 600 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-228ENST00000534373 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
CAPN1-228ENST00000534373 GJA3Q9Y6H8 435 aa17.22■□□□□ 0.35
CAPN1-228ENST00000534373 COL4A5P29400 1685 aa17.21■□□□□ 0.35
CAPN1-228ENST00000534373 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
CAPN1-228ENST00000534373 EAPPQ56P03 285 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-228ENST00000534373 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-228ENST00000534373 SLC51AQ86UW1 340 aa17.21■□□□□ 0.35
CAPN1-228ENST00000534373 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
CAPN1-228ENST00000534373 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
CAPN1-228ENST00000534373 PASKQ96RG2 1323 aa17.21■□□□□ 0.34
CAPN1-228ENST00000534373 PI4KAP2A4QPH2 592 aa17.2■□□□□ 0.34
CAPN1-228ENST00000534373 PDE8AO60658 829 aa17.2■□□□□ 0.34
CAPN1-228ENST00000534373 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-228ENST00000534373 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
CAPN1-228ENST00000534373 PI4KAP1Q8N8J0 262 aa17.2■□□□□ 0.34
CAPN1-228ENST00000534373 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
CAPN1-228ENST00000534373 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
CAPN1-228ENST00000534373 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
CAPN1-228ENST00000534373 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
CAPN1-228ENST00000534373 SCNN1DP51172 638 aa17.19■□□□□ 0.34
CAPN1-228ENST00000534373 CXCL9Q07325 125 aa17.19■□□□□ 0.34
CAPN1-228ENST00000534373 TNIP1Q15025 636 aa17.19■□□□□ 0.34
CAPN1-228ENST00000534373 CCDC152Q4G0S7 254 aa17.19■□□□□ 0.34
CAPN1-228ENST00000534373 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-228ENST00000534373 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
CAPN1-228ENST00000534373 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
CAPN1-228ENST00000534373 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
CAPN1-228ENST00000534373 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
CAPN1-228ENST00000534373 EPS15P42566 896 aa17.17■□□□□ 0.34
CAPN1-228ENST00000534373 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
CAPN1-228ENST00000534373 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
CAPN1-228ENST00000534373 ADAMTSL1Q8N6G6 1762 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 VAMP4O75379 141 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 EYA3Q99504 573 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
CAPN1-228ENST00000534373 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 TAF1P21675 1872 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
CAPN1-228ENST00000534373 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
CAPN1-228ENST00000534373 GPSM2P81274 684 aa17.15■□□□□ 0.34
CAPN1-228ENST00000534373 POLLQ9UGP5 575 aa17.15■□□□□ 0.34
CAPN1-228ENST00000534373 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-228ENST00000534373 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 FLIIQ13045 1269 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-228ENST00000534373 G2E3Q7L622 706 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 SEC31BQ9NQW1 1179 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 PCNTO95613 3336 aa17.14■□□□□ 0.33
CAPN1-228ENST00000534373 H7C1W4 665 aa17.13■□□□□ 0.33
CAPN1-228ENST00000534373 EXOSC9Q06265 439 aaKnown RBP17.13■□□□□ 0.33
CAPN1-228ENST00000534373 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
CAPN1-228ENST00000534373 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
CAPN1-228ENST00000534373 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
CAPN1-228ENST00000534373 CACNA1FO60840 1977 aa17.13■□□□□ 0.33
CAPN1-228ENST00000534373 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 RAD17O75943 681 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-228ENST00000534373 CTSWP56202 376 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-228ENST00000534373 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
CAPN1-228ENST00000534373 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
CAPN1-228ENST00000534373 DPF2Q92785 391 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-228ENST00000534373 CDC5LQ99459 802 aaKnown RBP17.12■□□□□ 0.33
CAPN1-228ENST00000534373 BCL2L13Q9BXK5 485 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 LTBP1Q14766 1721 aa17.12■□□□□ 0.33
CAPN1-228ENST00000534373 IFFO2Q5TF58 517 aa17.11■□□□□ 0.33
CAPN1-228ENST00000534373 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
CAPN1-228ENST00000534373 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
CAPN1-228ENST00000534373 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
CAPN1-228ENST00000534373 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
CAPN1-228ENST00000534373 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
CAPN1-228ENST00000534373 RTL9Q8NET4 1388 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms