RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 IRS4O14654 1257 aaPredicted RBP11.5□□□□□ -0.57
COPB1-211ENST00000534234 ANP32CO43423 234 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 ITGBL1O95965 494 aaPredicted RBP11.5□□□□□ -0.57
COPB1-211ENST00000534234 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
COPB1-211ENST00000534234 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
COPB1-211ENST00000534234 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 TMC4Q7Z404 712 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 MRS2Q9HD23 443 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 TSR2Q969E8 191 aaKnown RBP11.5□□□□□ -0.57
COPB1-211ENST00000534234 MYD88Q99836 296 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 ZNRF3Q9ULT6 936 aa11.5□□□□□ -0.57
COPB1-211ENST00000534234 PASKQ96RG2 1323 aa11.49□□□□□ -0.57
COPB1-211ENST00000534234 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
COPB1-211ENST00000534234 DDX58O95786 925 aaKnown RBP11.49□□□□□ -0.57
COPB1-211ENST00000534234 EPS15P42566 896 aa11.49□□□□□ -0.57
COPB1-211ENST00000534234 SCNN1DP51172 638 aa11.49□□□□□ -0.57
COPB1-211ENST00000534234 CXCL9Q07325 125 aa11.49□□□□□ -0.57
COPB1-211ENST00000534234 KIAA2012Q0VF49 1180 aa11.49□□□□□ -0.57
COPB1-211ENST00000534234 MAP1SQ66K74 1059 aaPredicted RBP11.49□□□□□ -0.57
COPB1-211ENST00000534234 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
COPB1-211ENST00000534234 ZBTB38Q8NAP3 1195 aaPredicted RBP11.49□□□□□ -0.57
COPB1-211ENST00000534234 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
COPB1-211ENST00000534234 NSFL1CQ9UNZ2 370 aaKnown RBP11.49□□□□□ -0.57
COPB1-211ENST00000534234 DICER1Q9UPY3 1922 aaKnown RBP11.48□□□□□ -0.57
COPB1-211ENST00000534234 COL4A5P29400 1685 aa11.48□□□□□ -0.57
COPB1-211ENST00000534234 HSP90B1P14625 803 aaKnown RBP11.48□□□□□ -0.57
COPB1-211ENST00000534234 CCDC191Q8NCU4 936 aa11.48□□□□□ -0.57
COPB1-211ENST00000534234 METTL22Q9BUU2 404 aaPredicted RBP11.48□□□□□ -0.57
COPB1-211ENST00000534234 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
COPB1-211ENST00000534234 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
COPB1-211ENST00000534234 RPS8P62241 208 aaKnown RBP11.47□□□□□ -0.57
COPB1-211ENST00000534234 JARID2Q92833 1246 aaPredicted RBP11.47□□□□□ -0.57
COPB1-211ENST00000534234 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
COPB1-211ENST00000534234 RAD17O75943 681 aa11.46□□□□□ -0.57
COPB1-211ENST00000534234 PCCAP05165 728 aaPredicted RBP11.46□□□□□ -0.57
COPB1-211ENST00000534234 WASHC4Q2M389 1173 aa11.46□□□□□ -0.57
COPB1-211ENST00000534234 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.57
COPB1-211ENST00000534234 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
COPB1-211ENST00000534234 KSR2Q6VAB6 950 aa11.46□□□□□ -0.57
COPB1-211ENST00000534234 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
COPB1-211ENST00000534234 CWC25Q9NXE8 425 aaPredicted RBP11.46□□□□□ -0.57
COPB1-211ENST00000534234 MAP3K2Q9Y2U5 619 aa11.46□□□□□ -0.57
COPB1-211ENST00000534234 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
COPB1-211ENST00000534234 PI4KAP2A4QPH2 592 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 TNIP1Q15025 636 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 PI4KAP1Q8N8J0 262 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 GPRC5DQ9NZD1 345 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 IL16Q14005 1332 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 PDE8AO60658 829 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 GMPSP49915 693 aaPredicted RBP11.45□□□□□ -0.58
COPB1-211ENST00000534234 GPSM2P81274 684 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 CCDC152Q4G0S7 254 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 BCL2L13Q9BXK5 485 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 ADARB2Q9NS39 739 aaKnown RBP11.45□□□□□ -0.58
COPB1-211ENST00000534234 POLLQ9UGP5 575 aa11.45□□□□□ -0.58
COPB1-211ENST00000534234 YDJCA8MPS7 323 aa11.44□□□□□ -0.58
COPB1-211ENST00000534234 HSPA1AP0DMV8 641 aaKnown RBP11.44□□□□□ -0.58
COPB1-211ENST00000534234 HSPA1BP0DMV9 641 aaKnown RBP11.44□□□□□ -0.58
COPB1-211ENST00000534234 NEXNQ0ZGT2 675 aa11.44□□□□□ -0.58
COPB1-211ENST00000534234 COL13A1Q5TAT6 717 aaPredicted RBP11.44□□□□□ -0.58
COPB1-211ENST00000534234 G2E3Q7L622 706 aa11.44□□□□□ -0.58
COPB1-211ENST00000534234 WDR63Q8IWG1 891 aa11.44□□□□□ -0.58
COPB1-211ENST00000534234 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
COPB1-211ENST00000534234 SCN4AP35499 1836 aa11.44□□□□□ -0.58
COPB1-211ENST00000534234 CNTNAP1P78357 1384 aa11.43□□□□□ -0.58
COPB1-211ENST00000534234 IGKV5-2P06315 115 aa11.43□□□□□ -0.58
COPB1-211ENST00000534234 TBC1D16Q8TBP0 767 aa11.43□□□□□ -0.58
COPB1-211ENST00000534234 EYA3Q99504 573 aa11.43□□□□□ -0.58
COPB1-211ENST00000534234 DBNDD1Q9H9R9 158 aa11.43□□□□□ -0.58
COPB1-211ENST00000534234 VEGFBP49765 207 aa11.42□□□□□ -0.58
COPB1-211ENST00000534234 FMR1Q06787 632 aaKnown RBP eCLIP11.42□□□□□ -0.584e-7■■■■■ 28.5
COPB1-211ENST00000534234 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
COPB1-211ENST00000534234 CWF19L2Q2TBE0 894 aaKnown RBP11.42□□□□□ -0.58
COPB1-211ENST00000534234 DEFB115Q30KQ5 88 aa11.42□□□□□ -0.58
COPB1-211ENST00000534234 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
COPB1-211ENST00000534234 ZC3H12CQ9C0D7 883 aaKnown RBP11.42□□□□□ -0.58
COPB1-211ENST00000534234 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
COPB1-211ENST00000534234 ANKIB1Q9P2G1 1089 aa11.42□□□□□ -0.58
COPB1-211ENST00000534234 CNOT7Q9UIV1 285 aaKnown RBP11.42□□□□□ -0.58
COPB1-211ENST00000534234 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
COPB1-211ENST00000534234 ANKRD36CQ5JPF3 1778 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 H7C1D1 291 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 VAMP4O75379 141 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 GPR101Q96P66 508 aaPredicted RBP11.41□□□□□ -0.58
COPB1-211ENST00000534234 KCNQ5Q9NR82 932 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 ABT1Q9ULW3 272 aaKnown RBP11.41□□□□□ -0.58
COPB1-211ENST00000534234 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
COPB1-211ENST00000534234 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 NEURL1BA8MQ27 555 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 G3V3G9 751 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 TRAF5O00463 557 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms