RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 TTLL11Q8NHH1 800 aa19.55■□□□□ 0.72
CTTN-215ENST00000533931 RPGRQ92834 1020 aaKnown RBP19.55■□□□□ 0.72
CTTN-215ENST00000533931 KAZALD1Q96I82 304 aa19.55■□□□□ 0.72
CTTN-215ENST00000533931 SUCLG2Q96I99 432 aa19.55■□□□□ 0.72
CTTN-215ENST00000533931 CRAMP1Q96RY5 1269 aa19.55■□□□□ 0.72
CTTN-215ENST00000533931 ALDH1B1P30837 517 aa19.54■□□□□ 0.72
CTTN-215ENST00000533931 C3orf67Q6ZVT6 689 aa19.54■□□□□ 0.72
CTTN-215ENST00000533931 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
CTTN-215ENST00000533931 CNKSR1Q969H4 720 aa19.54■□□□□ 0.72
CTTN-215ENST00000533931 COL11A2P13942 1736 aaPredicted RBP19.54■□□□□ 0.72
CTTN-215ENST00000533931 DPEP1P16444 411 aa19.53■□□□□ 0.72
CTTN-215ENST00000533931 KCNA3P22001 575 aa19.53■□□□□ 0.72
CTTN-215ENST00000533931 MTX1Q13505 466 aa19.53■□□□□ 0.72
CTTN-215ENST00000533931 RBM17Q96I25 401 aaKnown RBP19.53■□□□□ 0.72
CTTN-215ENST00000533931 ZBTB40Q9NUA8 1239 aa19.53■□□□□ 0.72
CTTN-215ENST00000533931 EPHA10Q5JZY3 1008 aa19.52■□□□□ 0.72
CTTN-215ENST00000533931 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.72
CTTN-215ENST00000533931 TMC4Q7Z404 712 aa19.52■□□□□ 0.72
CTTN-215ENST00000533931 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
CTTN-215ENST00000533931 BICC1Q9H694 974 aaKnown RBP19.52■□□□□ 0.72
CTTN-215ENST00000533931 PIM2Q9P1W9 311 aa19.52■□□□□ 0.72
CTTN-215ENST00000533931 LRRFIP2Q9Y608 721 aaKnown RBP19.52■□□□□ 0.72
CTTN-215ENST00000533931 CHRNA5P30532 468 aa19.51■□□□□ 0.71
CTTN-215ENST00000533931 ANKRD44Q8N8A2 993 aa19.51■□□□□ 0.71
CTTN-215ENST00000533931 NLGN2Q8NFZ4 835 aa19.51■□□□□ 0.71
CTTN-215ENST00000533931 MYH3P11055 1940 aa19.51■□□□□ 0.71
CTTN-215ENST00000533931 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
CTTN-215ENST00000533931 GRAPQ13588 217 aa19.5■□□□□ 0.71
CTTN-215ENST00000533931 LMBR1LQ6UX01 489 aa19.5■□□□□ 0.71
CTTN-215ENST00000533931 TTLL6Q8N841 843 aa19.5■□□□□ 0.71
CTTN-215ENST00000533931 GRAPLQ8TC17 118 aaPredicted RBP19.5■□□□□ 0.71
CTTN-215ENST00000533931 CDC5LQ99459 802 aaKnown RBP19.5■□□□□ 0.71
CTTN-215ENST00000533931 SRCAPQ6ZRS2 3230 aa19.49■□□□□ 0.71
CTTN-215ENST00000533931 BBOX1O75936 387 aa19.49■□□□□ 0.71
CTTN-215ENST00000533931 GREM2Q9H772 168 aa19.49■□□□□ 0.71
CTTN-215ENST00000533931 IFIT5Q13325 482 aaKnown RBP19.48■□□□□ 0.71
CTTN-215ENST00000533931 CCDC57Q2TAC2 916 aa19.48■□□□□ 0.71
CTTN-215ENST00000533931 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
CTTN-215ENST00000533931 DALRD3Q5D0E6 543 aaKnown RBP19.48■□□□□ 0.71
CTTN-215ENST00000533931 ZNF622Q969S3 477 aaKnown RBP eCLIP19.48■□□□□ 0.711e-7■□□□□ 10.1
CTTN-215ENST00000533931 BRCA1P38398 1863 aaKnown RBP19.48■□□□□ 0.71
CTTN-215ENST00000533931 ANKRD18BA2A2Z9 1011 aa19.47■□□□□ 0.71
CTTN-215ENST00000533931 ITGA6P23229 1130 aa19.47■□□□□ 0.71
CTTN-215ENST00000533931 GRIPAP1Q4V328 841 aa19.47■□□□□ 0.71
CTTN-215ENST00000533931 CC2D2BQ6DHV5 1058 aa19.47■□□□□ 0.71
CTTN-215ENST00000533931 RPAP2Q8IXW5 612 aaPredicted RBP19.47■□□□□ 0.71
CTTN-215ENST00000533931 CRBNQ96SW2 442 aa19.47■□□□□ 0.71
CTTN-215ENST00000533931 RPS8P62241 208 aaKnown RBP19.46■□□□□ 0.71
CTTN-215ENST00000533931 SOGA3Q5TF21 947 aa19.46■□□□□ 0.71
CTTN-215ENST00000533931 PRPF40BQ6NWY9 871 aaKnown RBP19.46■□□□□ 0.71
CTTN-215ENST00000533931 FBXO3Q9UK99 471 aa19.46■□□□□ 0.71
CTTN-215ENST00000533931 ANKRD18AQ8IVF6 992 aa19.45■□□□□ 0.7
CTTN-215ENST00000533931 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
CTTN-215ENST00000533931 IGHMBP2P38935 993 aaKnown RBP19.44■□□□□ 0.7
CTTN-215ENST00000533931 ATP8B2P98198 1209 aa19.44■□□□□ 0.7
CTTN-215ENST00000533931 CEP85Q6P2H3 762 aa19.44■□□□□ 0.7
CTTN-215ENST00000533931 SEC31BQ9NQW1 1179 aa19.44■□□□□ 0.7
CTTN-215ENST00000533931 BSDC1Q9NW68 430 aaPredicted RBP19.44■□□□□ 0.7
CTTN-215ENST00000533931 CHMP3Q9Y3E7 222 aa19.44■□□□□ 0.7
CTTN-215ENST00000533931 SRGAP3O43295 1099 aa19.43■□□□□ 0.7
CTTN-215ENST00000533931 RFX5P48382 616 aaPredicted RBP19.43■□□□□ 0.7
CTTN-215ENST00000533931 POLA2Q14181 598 aa19.43■□□□□ 0.7
CTTN-215ENST00000533931 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
CTTN-215ENST00000533931 SSH3Q8TE77 659 aa19.43■□□□□ 0.7
CTTN-215ENST00000533931 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
CTTN-215ENST00000533931 CELF1Q92879 486 aaKnown RBP19.43■□□□□ 0.7
CTTN-215ENST00000533931 COPRSQ9NQ92 184 aa19.43■□□□□ 0.7
CTTN-215ENST00000533931 ATP6V0A2Q9Y487 856 aa19.43■□□□□ 0.7
CTTN-215ENST00000533931 HMMRO75330 724 aa19.42■□□□□ 0.7
CTTN-215ENST00000533931 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
CTTN-215ENST00000533931 TMX4Q9H1E5 349 aaPredicted RBP19.42■□□□□ 0.7
CTTN-215ENST00000533931 LRRC37AA6NMS7 1700 aa19.42■□□□□ 0.7
CTTN-215ENST00000533931 TAF7LQ5H9L4 462 aa19.41■□□□□ 0.7
CTTN-215ENST00000533931 MPHOSPH8Q99549 860 aa19.41■□□□□ 0.7
CTTN-215ENST00000533931 C1orf115Q9H7X2 142 aa19.41■□□□□ 0.7
CTTN-215ENST00000533931 ARFGEF1Q9Y6D6 1849 aa19.4■□□□□ 0.7
CTTN-215ENST00000533931 CIAO1O76071 339 aa19.4■□□□□ 0.7
CTTN-215ENST00000533931 PTPN12Q05209 780 aaKnown RBP19.4■□□□□ 0.7
CTTN-215ENST00000533931 BCS1LQ9Y276 419 aa19.4■□□□□ 0.7
CTTN-215ENST00000533931 SNED1Q8TER0 1413 aa19.4■□□□□ 0.7
CTTN-215ENST00000533931 CCDC93Q567U6 631 aa19.39■□□□□ 0.69
CTTN-215ENST00000533931 LDHAL6AQ6ZMR3 332 aa19.39■□□□□ 0.69
CTTN-215ENST00000533931 PNMA6EA0A0J9YXQ4 647 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 COL4A1P02462 1669 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 NEFLP07196 543 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 SLX4Q8IY92 1834 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 RTKN2Q8IZC4 609 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 EXOC6Q8TAG9 804 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 ANKRD2Q9GZV1 360 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 PODXL2Q9NZ53 605 aa19.38■□□□□ 0.69
CTTN-215ENST00000533931 MROH5Q6ZUA9 1318 aa19.37■□□□□ 0.69
CTTN-215ENST00000533931 LTBP3Q9NS15 1303 aa19.37■□□□□ 0.69
CTTN-215ENST00000533931 EYA2O00167 538 aa19.37■□□□□ 0.69
CTTN-215ENST00000533931 GRIN3BO60391 1043 aa19.37■□□□□ 0.69
CTTN-215ENST00000533931 NOP58Q9Y2X3 529 aaKnown RBP19.37■□□□□ 0.69
CTTN-215ENST00000533931 C21orf2O43822 256 aa19.36■□□□□ 0.69
CTTN-215ENST00000533931 SIRT2Q8IXJ6 389 aa19.36■□□□□ 0.69
CTTN-215ENST00000533931 PSMD1Q99460 953 aa19.36■□□□□ 0.69
CTTN-215ENST00000533931 CNNM1Q9NRU3 951 aa19.36■□□□□ 0.69
CTTN-215ENST00000533931 MINPP1Q9UNW1 487 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms