RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 A0A0G2JLW4 131 aa17.64■□□□□ 0.41
CMTM1-218ENST00000533915 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
CMTM1-218ENST00000533915 MEIS3Q99687 375 aa17.64■□□□□ 0.41
CMTM1-218ENST00000533915 TMX4Q9H1E5 349 aaPredicted RBP17.64■□□□□ 0.41
CMTM1-218ENST00000533915 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
CMTM1-218ENST00000533915 CHRNA5P30532 468 aa17.63■□□□□ 0.41
CMTM1-218ENST00000533915 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
CMTM1-218ENST00000533915 TTLL11Q8NHH1 800 aa17.63■□□□□ 0.41
CMTM1-218ENST00000533915 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
CMTM1-218ENST00000533915 CRAMP1Q96RY5 1269 aa17.63■□□□□ 0.41
CMTM1-218ENST00000533915 CHMP3Q9Y3E7 222 aa17.63■□□□□ 0.41
CMTM1-218ENST00000533915 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
CMTM1-218ENST00000533915 DALRD3Q5D0E6 543 aaKnown RBP17.62■□□□□ 0.41
CMTM1-218ENST00000533915 C20orf194Q5TEA3 1177 aa17.62■□□□□ 0.41
CMTM1-218ENST00000533915 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
CMTM1-218ENST00000533915 BBOX1O75936 387 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 CSF1RP07333 972 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 FOXO4P98177 505 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
CMTM1-218ENST00000533915 AAMPQ13685 434 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 LMBR1LQ6UX01 489 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 C3orf67Q6ZVT6 689 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 TMC4Q7Z404 712 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
CMTM1-218ENST00000533915 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
CMTM1-218ENST00000533915 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
CMTM1-218ENST00000533915 TNRC6CQ9HCJ0 1690 aaKnown RBP17.61■□□□□ 0.41
CMTM1-218ENST00000533915 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
CMTM1-218ENST00000533915 RABL6Q3YEC7 729 aaPredicted RBP17.6■□□□□ 0.41
CMTM1-218ENST00000533915 TAF7LQ5H9L4 462 aa17.6■□□□□ 0.41
CMTM1-218ENST00000533915 DLEC1Q9Y238 1755 aa17.6■□□□□ 0.41
CMTM1-218ENST00000533915 GRAPQ13588 217 aa17.59■□□□□ 0.41
CMTM1-218ENST00000533915 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
CMTM1-218ENST00000533915 ANKRD18AQ8IVF6 992 aa17.59■□□□□ 0.41
CMTM1-218ENST00000533915 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
CMTM1-218ENST00000533915 CCDC85AQ96PX6 553 aaPredicted RBP17.59■□□□□ 0.41
CMTM1-218ENST00000533915 GREM2Q9H772 168 aa17.59■□□□□ 0.41
CMTM1-218ENST00000533915 KCNA3P22001 575 aa17.58■□□□□ 0.4
CMTM1-218ENST00000533915 ITGA6P23229 1130 aa17.58■□□□□ 0.4
CMTM1-218ENST00000533915 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
CMTM1-218ENST00000533915 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.4
CMTM1-218ENST00000533915 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.4
CMTM1-218ENST00000533915 RPS8P62241 208 aaKnown RBP17.57■□□□□ 0.4
CMTM1-218ENST00000533915 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 GRIPAP1Q4V328 841 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 EPHA10Q5JZY3 1008 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 CC2D2BQ6DHV5 1058 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 PRPF40BQ6NWY9 871 aaKnown RBP17.57■□□□□ 0.4
CMTM1-218ENST00000533915 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 MPHOSPH8Q99549 860 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 BCS1LQ9Y276 419 aa17.57■□□□□ 0.4
CMTM1-218ENST00000533915 KIAA1551Q9HCM1 1747 aa17.56■□□□□ 0.4
CMTM1-218ENST00000533915 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
CMTM1-218ENST00000533915 NEFLP07196 543 aa17.56■□□□□ 0.4
CMTM1-218ENST00000533915 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
CMTM1-218ENST00000533915 SRGAP3O43295 1099 aa17.55■□□□□ 0.4
CMTM1-218ENST00000533915 HMMRO75330 724 aa17.55■□□□□ 0.4
CMTM1-218ENST00000533915 MTX1Q13505 466 aa17.55■□□□□ 0.4
CMTM1-218ENST00000533915 GPR162Q16538 588 aa17.55■□□□□ 0.4
CMTM1-218ENST00000533915 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
CMTM1-218ENST00000533915 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
CMTM1-218ENST00000533915 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
CMTM1-218ENST00000533915 BRCA1P38398 1863 aaKnown RBP17.54■□□□□ 0.4
CMTM1-218ENST00000533915 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
CMTM1-218ENST00000533915 GRIN3BO60391 1043 aa17.53■□□□□ 0.4
CMTM1-218ENST00000533915 ATP8B2P98198 1209 aa17.53■□□□□ 0.4
CMTM1-218ENST00000533915 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
CMTM1-218ENST00000533915 RTKN2Q8IZC4 609 aa17.53■□□□□ 0.4
CMTM1-218ENST00000533915 CELF1Q92879 486 aaKnown RBP17.53■□□□□ 0.4
CMTM1-218ENST00000533915 C1orf115Q9H7X2 142 aa17.53■□□□□ 0.4
CMTM1-218ENST00000533915 ATP6V0A2Q9Y487 856 aa17.53■□□□□ 0.4
CMTM1-218ENST00000533915 CACNA1SQ13698 1873 aa17.52■□□□□ 0.4
CMTM1-218ENST00000533915 SLX4Q8IY92 1834 aa17.52■□□□□ 0.4
CMTM1-218ENST00000533915 CCDC93Q567U6 631 aa17.52■□□□□ 0.4
CMTM1-218ENST00000533915 LDHAL6AQ6ZMR3 332 aa17.52■□□□□ 0.4
CMTM1-218ENST00000533915 CNNM1Q9NRU3 951 aa17.52■□□□□ 0.4
CMTM1-218ENST00000533915 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
CMTM1-218ENST00000533915 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
CMTM1-218ENST00000533915 C21orf2O43822 256 aa17.51■□□□□ 0.39
CMTM1-218ENST00000533915 CEP85Q6P2H3 762 aa17.51■□□□□ 0.39
CMTM1-218ENST00000533915 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
CMTM1-218ENST00000533915 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
CMTM1-218ENST00000533915 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
CMTM1-218ENST00000533915 TAF1P21675 1872 aa17.5■□□□□ 0.39
CMTM1-218ENST00000533915 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
CMTM1-218ENST00000533915 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
CMTM1-218ENST00000533915 COPRSQ9NQ92 184 aa17.49■□□□□ 0.39
CMTM1-218ENST00000533915 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
CMTM1-218ENST00000533915 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
CMTM1-218ENST00000533915 CIAO1O76071 339 aa17.48■□□□□ 0.39
CMTM1-218ENST00000533915 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
CMTM1-218ENST00000533915 HSP90AB4PQ58FF6 505 aa17.48■□□□□ 0.39
CMTM1-218ENST00000533915 DPP8Q6V1X1 898 aaPredicted RBP17.48■□□□□ 0.39
CMTM1-218ENST00000533915 MPNDQ8N594 471 aa17.48■□□□□ 0.39
CMTM1-218ENST00000533915 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
CMTM1-218ENST00000533915 EXOC6Q8TAG9 804 aa17.48■□□□□ 0.39
CMTM1-218ENST00000533915 ZNF594Q96JF6 807 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms