RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 NMIQ13287 307 aaPredicted RBP8.67□□□□□ -1.02
RNPC3-209ENST00000533834 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
RNPC3-209ENST00000533834 STOX1Q6ZVD7 989 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 LTBP1Q14766 1721 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 TAF1P21675 1872 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 TEFQ10587 303 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 HS1BP3Q53T59 392 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 HSP90AB4PQ58FF6 505 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 COPS6Q7L5N1 327 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 CNTROBQ8N137 903 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 CABLES1Q8TDN4 633 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 HAUS7Q99871 368 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 ANO8Q9HCE9 1232 aaPredicted RBP8.66□□□□□ -1.02
RNPC3-209ENST00000533834 SYT1P21579 422 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 EVCP57679 992 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 CREB3L3Q68CJ9 461 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 PROSER2Q86WR7 435 aaPredicted RBP8.66□□□□□ -1.02
RNPC3-209ENST00000533834 PLBD2Q8NHP8 589 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 GPR108Q9NPR9 543 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
RNPC3-209ENST00000533834 FPGT-TNNI3KV9GXZ4 949 aa8.66□□□□□ -1.02
RNPC3-209ENST00000533834 NHSQ6T4R5 1651 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 ERC1Q8IUD2 1116 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 VGLL2Q8N8G2 317 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 RILPL2Q969X0 211 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 PLA2G12BQ9BX93 195 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 ANO2Q9NQ90 1003 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 ERVV-2B6SEH9 535 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 SNRPA1P09661 255 aaKnown RBP8.65□□□□□ -1.02
RNPC3-209ENST00000533834 C1orf141Q5JVX7 400 aa8.65□□□□□ -1.02
RNPC3-209ENST00000533834 FOCADQ5VW36 1801 aa8.65□□□□□ -1.03
RNPC3-209ENST00000533834 ZC3H6P61129 1189 aaKnown RBP8.65□□□□□ -1.03
RNPC3-209ENST00000533834 LARP1Q6PKG0 1096 aaKnown RBP8.65□□□□□ -1.03
RNPC3-209ENST00000533834 USP48Q86UV5 1035 aa8.65□□□□□ -1.03
RNPC3-209ENST00000533834 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.03
RNPC3-209ENST00000533834 LIMCH1Q9UPQ0 1083 aa8.65□□□□□ -1.03
RNPC3-209ENST00000533834 CARMIL3Q8ND23 1372 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 A0A0G2JLW4 131 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 KDM4FA0A1W2PPD8 638 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 ZNF500O60304 480 aaPredicted RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 CTDNEP1O95476 244 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 ZSCAN22P10073 491 aaPredicted RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 EXOSC10Q01780 885 aaKnown RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 CWC27Q6UX04 472 aaKnown RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 SMARCC2Q8TAQ2 1214 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 CSF1RP07333 972 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 CCDC173Q0VFZ6 552 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 EDC3Q96F86 508 aaKnown RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 RBM8AQ9Y5S9 174 aaKnown RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 ABCC12Q96J65 1359 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 MYH13Q9UKX3 1938 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 TNRC6CQ9HCJ0 1690 aaKnown RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 F13A1P00488 732 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 ILDR1Q86SU0 546 aaPredicted RBP8.64□□□□□ -1.03
RNPC3-209ENST00000533834 CARD10Q9BWT7 1032 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 NBPF3Q9H094 633 aa8.64□□□□□ -1.03
RNPC3-209ENST00000533834 ELP1O95163 1332 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 PCDH11XQ9BZA7 1347 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 PCDH11YQ9BZA8 1340 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 RPS6KB1P23443 525 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 TRIM28Q13263 835 aaKnown RBP8.63□□□□□ -1.03
RNPC3-209ENST00000533834 CAVIN1Q6NZI2 390 aaKnown RBP8.63□□□□□ -1.03
RNPC3-209ENST00000533834 ANKRD13DQ6ZTN6 518 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 CIAO1O76071 339 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 TFCP2Q12800 502 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 TTLL7Q6ZT98 887 aa8.63□□□□□ -1.03
RNPC3-209ENST00000533834 NOL7Q9UMY1 257 aaKnown RBP8.63□□□□□ -1.03
RNPC3-209ENST00000533834 ESPNB1AK53 854 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 NID2Q14112 1375 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 CADPS2Q86UW7 1296 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 AACSQ86V21 672 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 MYD88Q99836 296 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 LRRC37AA6NMS7 1700 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 MYH2Q9UKX2 1941 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
RNPC3-209ENST00000533834 CHRNA2Q15822 529 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 FMNL2Q96PY5 1086 aa8.62□□□□□ -1.03
RNPC3-209ENST00000533834 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
RNPC3-209ENST00000533834 CYP21A2P08686 494 aa8.61□□□□□ -1.03
RNPC3-209ENST00000533834 CNPY2Q9Y2B0 182 aa8.61□□□□□ -1.03
RNPC3-209ENST00000533834 STX6O43752 255 aa8.61□□□□□ -1.03
RNPC3-209ENST00000533834 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
RNPC3-209ENST00000533834 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
RNPC3-209ENST00000533834 CLASRPQ8N2M8 674 aaKnown RBP8.61□□□□□ -1.03
RNPC3-209ENST00000533834 PIP4P2Q8N4L2 257 aa8.61□□□□□ -1.03
RNPC3-209ENST00000533834 CCDC8Q9H0W5 538 aaPredicted RBP8.61□□□□□ -1.03
RNPC3-209ENST00000533834 WDR33Q9C0J8 1336 aaKnown RBP8.61□□□□□ -1.03
RNPC3-209ENST00000533834 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
RNPC3-209ENST00000533834 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms