RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 TIAM2Q8IVF5 1701 aa20.13■□□□□ 0.81
TSKU-204ENST00000533752 PRELPP51888 382 aa20.12■□□□□ 0.81
TSKU-204ENST00000533752 MRPL50Q8N5N7 158 aaKnown RBP20.12■□□□□ 0.81
TSKU-204ENST00000533752 ZNF526Q8TF50 670 aaPredicted RBP20.12■□□□□ 0.81
TSKU-204ENST00000533752 F6X3S4 739 aa20.11■□□□□ 0.81
TSKU-204ENST00000533752 OLFM4Q6UX06 510 aa20.11■□□□□ 0.81
TSKU-204ENST00000533752 SSH1Q8WYL5 1049 aa20.11■□□□□ 0.81
TSKU-204ENST00000533752 H7C1W4 665 aa20.1■□□□□ 0.81
TSKU-204ENST00000533752 CTSWP56202 376 aa20.1■□□□□ 0.81
TSKU-204ENST00000533752 BEND3Q5T5X7 828 aa20.1■□□□□ 0.81
TSKU-204ENST00000533752 UBE3BQ7Z3V4 1068 aa20.1■□□□□ 0.81
TSKU-204ENST00000533752 SP8Q8IXZ3 490 aa20.1■□□□□ 0.81
TSKU-204ENST00000533752 SMC4Q9NTJ3 1288 aa20.1■□□□□ 0.81
TSKU-204ENST00000533752 DICER1Q9UPY3 1922 aaKnown RBP20.1■□□□□ 0.81
TSKU-204ENST00000533752 ZNF277Q9NRM2 450 aaPredicted RBP20.09■□□□□ 0.81
TSKU-204ENST00000533752 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.81
TSKU-204ENST00000533752 CCDC88AQ3V6T2 1871 aa20.08■□□□□ 0.81
TSKU-204ENST00000533752 ALDH1L1O75891 902 aa20.08■□□□□ 0.81
TSKU-204ENST00000533752 IARSP41252 1262 aaKnown RBP20.08■□□□□ 0.81
TSKU-204ENST00000533752 SUPT20HQ8NEM7 779 aa20.08■□□□□ 0.81
TSKU-204ENST00000533752 JARID2Q92833 1246 aaPredicted RBP20.08■□□□□ 0.81
TSKU-204ENST00000533752 PLA2G12BQ9BX93 195 aa20.08■□□□□ 0.81
TSKU-204ENST00000533752 RTL9Q8NET4 1388 aa20.08■□□□□ 0.8
TSKU-204ENST00000533752 LRRC37AA6NMS7 1700 aa20.07■□□□□ 0.8
TSKU-204ENST00000533752 DPY19L2Q6NUT2 758 aa20.07■□□□□ 0.8
TSKU-204ENST00000533752 SLC4A10Q6U841 1118 aa20.07■□□□□ 0.8
TSKU-204ENST00000533752 BCL2L13Q9BXK5 485 aa20.07■□□□□ 0.8
TSKU-204ENST00000533752 SRCIN1Q9C0H9 1055 aa20.07■□□□□ 0.8
TSKU-204ENST00000533752 VPS33BQ9H267 617 aa20.07■□□□□ 0.8
TSKU-204ENST00000533752 GLTPD2A6NH11 291 aa20.06■□□□□ 0.8
TSKU-204ENST00000533752 RPS8P62241 208 aaKnown RBP20.06■□□□□ 0.8
TSKU-204ENST00000533752 DPP8Q6V1X1 898 aaPredicted RBP20.06■□□□□ 0.8
TSKU-204ENST00000533752 MPNDQ8N594 471 aa20.06■□□□□ 0.8
TSKU-204ENST00000533752 CELF1Q92879 486 aaKnown RBP20.06■□□□□ 0.8
TSKU-204ENST00000533752 CDC5LQ99459 802 aaKnown RBP20.06■□□□□ 0.8
TSKU-204ENST00000533752 MYH3P11055 1940 aa20.06■□□□□ 0.8
TSKU-204ENST00000533752 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
TSKU-204ENST00000533752 CASP7P55210 303 aa20.05■□□□□ 0.8
TSKU-204ENST00000533752 JDP2Q8WYK2 163 aa20.05■□□□□ 0.8
TSKU-204ENST00000533752 RTFDC1Q9BY42 306 aaPredicted RBP20.05■□□□□ 0.8
TSKU-204ENST00000533752 KIF16BQ96L93 1317 aa20.04■□□□□ 0.8
TSKU-204ENST00000533752 GRM8O00222 908 aa20.04■□□□□ 0.8
TSKU-204ENST00000533752 ANKRD18AQ8IVF6 992 aa20.04■□□□□ 0.8
TSKU-204ENST00000533752 TTLL11Q8NHH1 800 aa20.04■□□□□ 0.8
TSKU-204ENST00000533752 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
TSKU-204ENST00000533752 LARGE2Q8N3Y3 721 aa20.03■□□□□ 0.8
TSKU-204ENST00000533752 SEC31BQ9NQW1 1179 aa20.03■□□□□ 0.8
TSKU-204ENST00000533752 RARSP54136 660 aaKnown RBP20.02■□□□□ 0.8
TSKU-204ENST00000533752 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
TSKU-204ENST00000533752 GREM2Q9H772 168 aa20.02■□□□□ 0.8
TSKU-204ENST00000533752 NMRK2Q9NPI5 230 aa20.02■□□□□ 0.8
TSKU-204ENST00000533752 TAF1P21675 1872 aa20.01■□□□□ 0.79
TSKU-204ENST00000533752 KIF3CO14782 793 aa20.01■□□□□ 0.79
TSKU-204ENST00000533752 PPIP5K2O43314 1243 aa20.01■□□□□ 0.79
TSKU-204ENST00000533752 SLC51AQ86UW1 340 aa20.01■□□□□ 0.79
TSKU-204ENST00000533752 NIM1KQ8IY84 436 aa20.01■□□□□ 0.79
TSKU-204ENST00000533752 API5Q9BZZ5 524 aaKnown RBP20.01■□□□□ 0.79
TSKU-204ENST00000533752 FZD9O00144 591 aa20■□□□□ 0.79
TSKU-204ENST00000533752 CSF1RP07333 972 aa20■□□□□ 0.79
TSKU-204ENST00000533752 C16orf71Q8IYS4 520 aaPredicted RBP20■□□□□ 0.79
TSKU-204ENST00000533752 NSFL1CQ9UNZ2 370 aaKnown RBP20■□□□□ 0.79
TSKU-204ENST00000533752 COL4A1P02462 1669 aa20■□□□□ 0.79
TSKU-204ENST00000533752 DUOX1Q9NRD9 1551 aa20■□□□□ 0.79
TSKU-204ENST00000533752 WDR90Q96KV7 1748 aa19.99■□□□□ 0.79
TSKU-204ENST00000533752 EIF6P56537 245 aaKnown RBP19.99■□□□□ 0.79
TSKU-204ENST00000533752 C1QTNF8P60827 252 aa19.99■□□□□ 0.79
TSKU-204ENST00000533752 KIAA2012Q0VF49 1180 aa19.99■□□□□ 0.79
TSKU-204ENST00000533752 UTYO14607 1347 aa19.99■□□□□ 0.79
TSKU-204ENST00000533752 VEGFAP15692 232 aaPredicted RBP19.98■□□□□ 0.79
TSKU-204ENST00000533752 ITGA6P23229 1130 aa19.98■□□□□ 0.79
TSKU-204ENST00000533752 IGHMBP2P38935 993 aaKnown RBP19.98■□□□□ 0.79
TSKU-204ENST00000533752 CCT4P50991 539 aaKnown RBP19.98■□□□□ 0.79
TSKU-204ENST00000533752 AOC3Q16853 763 aa19.98■□□□□ 0.79
TSKU-204ENST00000533752 FAM161AQ3B820 660 aa19.98■□□□□ 0.79
TSKU-204ENST00000533752 ARHGAP45Q92619 1136 aa19.98■□□□□ 0.79
TSKU-204ENST00000533752 EYA3Q99504 573 aa19.98■□□□□ 0.79
TSKU-204ENST00000533752 BSDC1Q9NW68 430 aaPredicted RBP19.98■□□□□ 0.79
TSKU-204ENST00000533752 PODXL2Q9NZ53 605 aa19.98■□□□□ 0.79
TSKU-204ENST00000533752 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
TSKU-204ENST00000533752 LTBP1Q14766 1721 aa19.97■□□□□ 0.79
TSKU-204ENST00000533752 GPSM2P81274 684 aa19.97■□□□□ 0.79
TSKU-204ENST00000533752 RRAGCQ9HB90 399 aa19.97■□□□□ 0.79
TSKU-204ENST00000533752 ANKIB1Q9P2G1 1089 aa19.97■□□□□ 0.79
TSKU-204ENST00000533752 XDHP47989 1333 aa19.97■□□□□ 0.79
TSKU-204ENST00000533752 ZNF541Q9H0D2 1346 aa19.97■□□□□ 0.79
TSKU-204ENST00000533752 ANKRD18BA2A2Z9 1011 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 IQCA1LA6NCM1 817 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 C6orf229H3BNL8 230 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 IPO8O15397 1037 aaKnown RBP19.96■□□□□ 0.79
TSKU-204ENST00000533752 TOMM70O94826 608 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 FOXO4P98177 505 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 WASHC4Q2M389 1173 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 GPC2Q8N158 579 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 L3MBTL3Q96JM7 780 aaPredicted RBP19.96■□□□□ 0.79
TSKU-204ENST00000533752 GGA1Q9UJY5 639 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 COL4A5P29400 1685 aa19.96■□□□□ 0.79
TSKU-204ENST00000533752 DDNO94850 711 aaPredicted RBP19.95■□□□□ 0.78
TSKU-204ENST00000533752 IFIT5Q13325 482 aaKnown RBP19.95■□□□□ 0.78
TSKU-204ENST00000533752 MPHOSPH8Q99549 860 aa19.95■□□□□ 0.78
TSKU-204ENST00000533752 ZNRF3Q9ULT6 936 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms