RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 GRAPQ13588 217 aa21.64■■□□□ 1.05
FGFR1-239ENST00000533619 RTKN2Q8IZC4 609 aa21.64■■□□□ 1.05
FGFR1-239ENST00000533619 GRAPLQ8TC17 118 aaPredicted RBP21.64■■□□□ 1.05
FGFR1-239ENST00000533619 PLA2G12BQ9BX93 195 aa21.64■■□□□ 1.05
FGFR1-239ENST00000533619 MYH3P11055 1940 aa21.63■■□□□ 1.05
FGFR1-239ENST00000533619 PPEF1O14829 653 aaPredicted RBP21.63■■□□□ 1.05
FGFR1-239ENST00000533619 CCT4P50991 539 aaKnown RBP21.63■■□□□ 1.05
FGFR1-239ENST00000533619 CASP7P55210 303 aa21.63■■□□□ 1.05
FGFR1-239ENST00000533619 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
FGFR1-239ENST00000533619 BCAR3O75815 825 aa21.62■■□□□ 1.05
FGFR1-239ENST00000533619 CTSWP56202 376 aa21.62■■□□□ 1.05
FGFR1-239ENST00000533619 UTRNP46939 3433 aa21.62■■□□□ 1.05
FGFR1-239ENST00000533619 SP8Q8IXZ3 490 aa21.61■■□□□ 1.05
FGFR1-239ENST00000533619 TTLL11Q8NHH1 800 aa21.61■■□□□ 1.05
FGFR1-239ENST00000533619 ATP6V0A2Q9Y487 856 aa21.61■■□□□ 1.05
FGFR1-239ENST00000533619 SBF1O95248 1867 aa21.6■■□□□ 1.05
FGFR1-239ENST00000533619 LTBP3Q9NS15 1303 aa21.6■■□□□ 1.05
FGFR1-239ENST00000533619 LMNB1P20700 586 aa21.6■■□□□ 1.05
FGFR1-239ENST00000533619 FRAT1Q92837 279 aaPredicted RBP21.6■■□□□ 1.05
FGFR1-239ENST00000533619 TAOK3Q9H2K8 898 aa21.6■■□□□ 1.05
FGFR1-239ENST00000533619 NFKBIEO00221 500 aa21.59■■□□□ 1.05
FGFR1-239ENST00000533619 RPS8P62241 208 aaKnown RBP21.59■■□□□ 1.05
FGFR1-239ENST00000533619 ATF7IPQ6VMQ6 1270 aa21.59■■□□□ 1.05
FGFR1-239ENST00000533619 UTYO14607 1347 aa21.58■■□□□ 1.05
FGFR1-239ENST00000533619 TAF1P21675 1872 aa21.58■■□□□ 1.05
FGFR1-239ENST00000533619 CSF1RP07333 972 aa21.58■■□□□ 1.05
FGFR1-239ENST00000533619 C9orf131Q5VYM1 1079 aa21.58■■□□□ 1.05
FGFR1-239ENST00000533619 ZKSCAN2Q63HK3 967 aa21.58■■□□□ 1.05
FGFR1-239ENST00000533619 CDC5LQ99459 802 aaKnown RBP21.58■■□□□ 1.05
FGFR1-239ENST00000533619 RTL9Q8NET4 1388 aa21.58■■□□□ 1.04
FGFR1-239ENST00000533619 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.04
FGFR1-239ENST00000533619 FKBP4Q02790 459 aaKnown RBP eCLIP21.57■■□□□ 1.04
FGFR1-239ENST00000533619 RASSF7Q02833 373 aa21.57■■□□□ 1.04
FGFR1-239ENST00000533619 CELF1Q92879 486 aaKnown RBP21.57■■□□□ 1.04
FGFR1-239ENST00000533619 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
FGFR1-239ENST00000533619 INTS3Q68E01 1043 aaKnown RBP21.56■■□□□ 1.04
FGFR1-239ENST00000533619 OLFM4Q6UX06 510 aa21.56■■□□□ 1.04
FGFR1-239ENST00000533619 ANKRD18AQ8IVF6 992 aa21.56■■□□□ 1.04
FGFR1-239ENST00000533619 CCDC85AQ96PX6 553 aaPredicted RBP21.56■■□□□ 1.04
FGFR1-239ENST00000533619 PSMD1Q99460 953 aa21.56■■□□□ 1.04
FGFR1-239ENST00000533619 SEC31BQ9NQW1 1179 aa21.56■■□□□ 1.04
FGFR1-239ENST00000533619 RNF181Q9P0P0 153 aa21.56■■□□□ 1.04
FGFR1-239ENST00000533619 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
FGFR1-239ENST00000533619 NBPF7P0C2Y1 421 aaPredicted RBP21.55■■□□□ 1.04
FGFR1-239ENST00000533619 TRIM27P14373 513 aa21.55■■□□□ 1.04
FGFR1-239ENST00000533619 FOXO4P98177 505 aa21.55■■□□□ 1.04
FGFR1-239ENST00000533619 USP44Q9H0E7 712 aa21.55■■□□□ 1.04
FGFR1-239ENST00000533619 GREM2Q9H772 168 aa21.55■■□□□ 1.04
FGFR1-239ENST00000533619 MPNDQ8N594 471 aa21.54■■□□□ 1.04
FGFR1-239ENST00000533619 SUPT20HQ8NEM7 779 aa21.54■■□□□ 1.04
FGFR1-239ENST00000533619 ZC3H4Q9UPT8 1303 aaKnown RBP21.54■■□□□ 1.04
FGFR1-239ENST00000533619 VPS33BQ9H267 617 aa21.53■■□□□ 1.04
FGFR1-239ENST00000533619 RCAN3Q9UKA8 241 aa21.53■■□□□ 1.04
FGFR1-239ENST00000533619 DICER1Q9UPY3 1922 aaKnown RBP21.53■■□□□ 1.04
FGFR1-239ENST00000533619 ANKRD18BA2A2Z9 1011 aa21.52■■□□□ 1.04
FGFR1-239ENST00000533619 MS4A1P11836 297 aa21.52■■□□□ 1.04
FGFR1-239ENST00000533619 ITGA6P23229 1130 aa21.52■■□□□ 1.04
FGFR1-239ENST00000533619 IFIT5Q13325 482 aaKnown RBP21.52■■□□□ 1.04
FGFR1-239ENST00000533619 LMBR1LQ6UX01 489 aa21.52■■□□□ 1.04
FGFR1-239ENST00000533619 DPP8Q6V1X1 898 aaPredicted RBP21.52■■□□□ 1.04
FGFR1-239ENST00000533619 SNED1Q8TER0 1413 aa21.52■■□□□ 1.04
FGFR1-239ENST00000533619 IGHMBP2P38935 993 aaKnown RBP21.51■■□□□ 1.03
FGFR1-239ENST00000533619 PRELPP51888 382 aa21.51■■□□□ 1.03
FGFR1-239ENST00000533619 SUCLG2Q96I99 432 aa21.51■■□□□ 1.03
FGFR1-239ENST00000533619 BSDC1Q9NW68 430 aaPredicted RBP21.51■■□□□ 1.03
FGFR1-239ENST00000533619 CHMP3Q9Y3E7 222 aa21.51■■□□□ 1.03
FGFR1-239ENST00000533619 UBTFL1P0CB47 393 aaPredicted RBP21.5■■□□□ 1.03
FGFR1-239ENST00000533619 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
FGFR1-239ENST00000533619 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
FGFR1-239ENST00000533619 FAM161AQ3B820 660 aa21.5■■□□□ 1.03
FGFR1-239ENST00000533619 EPHA10Q5JZY3 1008 aa21.5■■□□□ 1.03
FGFR1-239ENST00000533619 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
FGFR1-239ENST00000533619 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
FGFR1-239ENST00000533619 MPHOSPH8Q99549 860 aa21.5■■□□□ 1.03
FGFR1-239ENST00000533619 RTFDC1Q9BY42 306 aaPredicted RBP21.5■■□□□ 1.03
FGFR1-239ENST00000533619 NSFL1CQ9UNZ2 370 aaKnown RBP21.5■■□□□ 1.03
FGFR1-239ENST00000533619 LRRC37AA6NMS7 1700 aa21.49■■□□□ 1.03
FGFR1-239ENST00000533619 GNAI3P08754 354 aa21.49■■□□□ 1.03
FGFR1-239ENST00000533619 DZIP1LQ8IYY4 767 aaKnown RBP21.49■■□□□ 1.03
FGFR1-239ENST00000533619 KAZALD1Q96I82 304 aa21.49■■□□□ 1.03
FGFR1-239ENST00000533619 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
FGFR1-239ENST00000533619 RABL6Q3YEC7 729 aaPredicted RBP21.48■■□□□ 1.03
FGFR1-239ENST00000533619 BICC1Q9H694 974 aaKnown RBP21.48■■□□□ 1.03
FGFR1-239ENST00000533619 TAF7LQ5H9L4 462 aa21.47■■□□□ 1.03
FGFR1-239ENST00000533619 ZNF784Q8NCA9 323 aaPredicted RBP21.47■■□□□ 1.03
FGFR1-239ENST00000533619 JDP2Q8WYK2 163 aa21.47■■□□□ 1.03
FGFR1-239ENST00000533619 PODXL2Q9NZ53 605 aa21.47■■□□□ 1.03
FGFR1-239ENST00000533619 ANKIB1Q9P2G1 1089 aa21.47■■□□□ 1.03
FGFR1-239ENST00000533619 GPSM2P81274 684 aa21.46■■□□□ 1.03
FGFR1-239ENST00000533619 DPY19L2Q6NUT2 758 aa21.46■■□□□ 1.03
FGFR1-239ENST00000533619 TMEM57Q8N5G2 664 aa21.46■■□□□ 1.03
FGFR1-239ENST00000533619 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
FGFR1-239ENST00000533619 TNNQ9UQP3 1299 aa21.46■■□□□ 1.03
FGFR1-239ENST00000533619 COL4A1P02462 1669 aa21.45■■□□□ 1.02
FGFR1-239ENST00000533619 LARGE2Q8N3Y3 721 aa21.45■■□□□ 1.02
FGFR1-239ENST00000533619 EYA3Q99504 573 aa21.45■■□□□ 1.02
FGFR1-239ENST00000533619 ANKRD2Q9GZV1 360 aa21.45■■□□□ 1.02
FGFR1-239ENST00000533619 MINPP1Q9UNW1 487 aa21.45■■□□□ 1.02
FGFR1-239ENST00000533619 XDHP47989 1333 aa21.45■■□□□ 1.02
FGFR1-239ENST00000533619 C6orf229H3BNL8 230 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms