RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 GRIPAP1Q4V328 841 aa21.79■■□□□ 1.08
CTSB-229ENST00000533572 ZKSCAN2Q63HK3 967 aa21.79■■□□□ 1.08
CTSB-229ENST00000533572 OLFM4Q6UX06 510 aa21.79■■□□□ 1.08
CTSB-229ENST00000533572 NOB1Q9ULX3 412 aaKnown RBP21.79■■□□□ 1.08
CTSB-229ENST00000533572 ABCC4O15439 1325 aa21.79■■□□□ 1.08
CTSB-229ENST00000533572 TIAM2Q8IVF5 1701 aa21.78■■□□□ 1.08
CTSB-229ENST00000533572 PCCAP05165 728 aaPredicted RBP21.77■■□□□ 1.08
CTSB-229ENST00000533572 IFFO2Q5TF58 517 aa21.77■■□□□ 1.08
CTSB-229ENST00000533572 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
CTSB-229ENST00000533572 FRAT1Q92837 279 aaPredicted RBP21.77■■□□□ 1.08
CTSB-229ENST00000533572 LAMB2P55268 1798 aa21.76■■□□□ 1.07
CTSB-229ENST00000533572 BBOX1O75936 387 aa21.76■■□□□ 1.07
CTSB-229ENST00000533572 GRAPQ13588 217 aa21.76■■□□□ 1.07
CTSB-229ENST00000533572 DPY19L2Q6NUT2 758 aa21.76■■□□□ 1.07
CTSB-229ENST00000533572 ATF7IPQ6VMQ6 1270 aa21.76■■□□□ 1.07
CTSB-229ENST00000533572 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
CTSB-229ENST00000533572 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
CTSB-229ENST00000533572 DDX60Q8IY21 1712 aaKnown RBP21.75■■□□□ 1.07
CTSB-229ENST00000533572 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
CTSB-229ENST00000533572 PSMD1Q99460 953 aa21.75■■□□□ 1.07
CTSB-229ENST00000533572 NMRK2Q9NPI5 230 aa21.75■■□□□ 1.07
CTSB-229ENST00000533572 DICER1Q9UPY3 1922 aaKnown RBP21.74■■□□□ 1.07
CTSB-229ENST00000533572 GLTPD2A6NH11 291 aa21.74■■□□□ 1.07
CTSB-229ENST00000533572 SF3B3Q15393 1217 aaKnown RBP21.74■■□□□ 1.07
CTSB-229ENST00000533572 TMC4Q7Z404 712 aa21.74■■□□□ 1.07
CTSB-229ENST00000533572 ATP6V0A2Q9Y487 856 aa21.74■■□□□ 1.07
CTSB-229ENST00000533572 KIF3CO14782 793 aa21.73■■□□□ 1.07
CTSB-229ENST00000533572 IGKV5-2P06315 115 aa21.73■■□□□ 1.07
CTSB-229ENST00000533572 IARSP41252 1262 aaKnown RBP21.73■■□□□ 1.07
CTSB-229ENST00000533572 NEURL1BA8MQ27 555 aa21.72■■□□□ 1.07
CTSB-229ENST00000533572 PDE8AO60658 829 aa21.72■■□□□ 1.07
CTSB-229ENST00000533572 CWF19L2Q2TBE0 894 aaKnown RBP21.72■■□□□ 1.07
CTSB-229ENST00000533572 CCDC152Q4G0S7 254 aa21.72■■□□□ 1.07
CTSB-229ENST00000533572 JARID2Q92833 1246 aaPredicted RBP21.72■■□□□ 1.07
CTSB-229ENST00000533572 TRIM27P14373 513 aa21.71■■□□□ 1.07
CTSB-229ENST00000533572 CCT4P50991 539 aaKnown RBP21.71■■□□□ 1.07
CTSB-229ENST00000533572 SP8Q8IXZ3 490 aa21.71■■□□□ 1.07
CTSB-229ENST00000533572 FTSJ3Q8IY81 847 aaKnown RBP21.71■■□□□ 1.07
CTSB-229ENST00000533572 SUPT20HQ8NEM7 779 aa21.71■■□□□ 1.07
CTSB-229ENST00000533572 LINS1Q8NG48 757 aa21.71■■□□□ 1.07
CTSB-229ENST00000533572 JDP2Q8WYK2 163 aa21.71■■□□□ 1.07
CTSB-229ENST00000533572 RRAGCQ9HB90 399 aa21.71■■□□□ 1.07
CTSB-229ENST00000533572 CDHR2Q9BYE9 1310 aa21.71■■□□□ 1.07
CTSB-229ENST00000533572 DPP8Q6V1X1 898 aaPredicted RBP21.7■■□□□ 1.06
CTSB-229ENST00000533572 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
CTSB-229ENST00000533572 RRP1P56182 461 aaKnown RBP21.69■■□□□ 1.06
CTSB-229ENST00000533572 PDE3AQ14432 1141 aa21.69■■□□□ 1.06
CTSB-229ENST00000533572 SLC4A10Q6U841 1118 aa21.69■■□□□ 1.06
CTSB-229ENST00000533572 DZIP1LQ8IYY4 767 aaKnown RBP21.69■■□□□ 1.06
CTSB-229ENST00000533572 LARGE2Q8N3Y3 721 aa21.69■■□□□ 1.06
CTSB-229ENST00000533572 MPNDQ8N594 471 aa21.69■■□□□ 1.06
CTSB-229ENST00000533572 SRCIN1Q9C0H9 1055 aa21.69■■□□□ 1.06
CTSB-229ENST00000533572 SNED1Q8TER0 1413 aa21.69■■□□□ 1.06
CTSB-229ENST00000533572 F6X3S4 739 aa21.68■■□□□ 1.06
CTSB-229ENST00000533572 GCKRQ14397 625 aa21.68■■□□□ 1.06
CTSB-229ENST00000533572 UBE3BQ7Z3V4 1068 aa21.68■■□□□ 1.06
CTSB-229ENST00000533572 CELF1Q92879 486 aaKnown RBP21.68■■□□□ 1.06
CTSB-229ENST00000533572 PPIP5K2O43314 1243 aa21.67■■□□□ 1.06
CTSB-229ENST00000533572 TOMM70O94826 608 aa21.67■■□□□ 1.06
CTSB-229ENST00000533572 VEGFAP15692 232 aaPredicted RBP21.67■■□□□ 1.06
CTSB-229ENST00000533572 BEND3Q5T5X7 828 aa21.67■■□□□ 1.06
CTSB-229ENST00000533572 INTS3Q68E01 1043 aaKnown RBP21.67■■□□□ 1.06
CTSB-229ENST00000533572 CCDC85AQ96PX6 553 aaPredicted RBP21.67■■□□□ 1.06
CTSB-229ENST00000533572 CTSWP56202 376 aa21.66■■□□□ 1.06
CTSB-229ENST00000533572 RPS8P62241 208 aaKnown RBP21.66■■□□□ 1.06
CTSB-229ENST00000533572 SLC51AQ86UW1 340 aa21.66■■□□□ 1.06
CTSB-229ENST00000533572 H7C1W4 665 aa21.65■■□□□ 1.06
CTSB-229ENST00000533572 DDNO94850 711 aaPredicted RBP21.65■■□□□ 1.06
CTSB-229ENST00000533572 EIF6P56537 245 aaKnown RBP21.65■■□□□ 1.06
CTSB-229ENST00000533572 NIM1KQ8IY84 436 aa21.65■■□□□ 1.06
CTSB-229ENST00000533572 VPS33BQ9H267 617 aa21.65■■□□□ 1.06
CTSB-229ENST00000533572 CHMP4BQ9H444 224 aaKnown RBP21.65■■□□□ 1.06
CTSB-229ENST00000533572 TAF1P21675 1872 aa21.64■■□□□ 1.06
CTSB-229ENST00000533572 ANKRD18AQ8IVF6 992 aa21.64■■□□□ 1.05
CTSB-229ENST00000533572 CLUAP1Q96AJ1 413 aa21.64■■□□□ 1.05
CTSB-229ENST00000533572 CDC5LQ99459 802 aaKnown RBP21.64■■□□□ 1.05
CTSB-229ENST00000533572 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.05
CTSB-229ENST00000533572 HDAC5Q9UQL6 1122 aa21.64■■□□□ 1.05
CTSB-229ENST00000533572 SUPT16HQ9Y5B9 1047 aaKnown RBP21.64■■□□□ 1.05
CTSB-229ENST00000533572 AOC3Q16853 763 aa21.63■■□□□ 1.05
CTSB-229ENST00000533572 RBM46Q8TBY0 533 aaKnown RBP21.63■■□□□ 1.05
CTSB-229ENST00000533572 RTFDC1Q9BY42 306 aaPredicted RBP21.63■■□□□ 1.05
CTSB-229ENST00000533572 NSFL1CQ9UNZ2 370 aaKnown RBP21.63■■□□□ 1.05
CTSB-229ENST00000533572 ZNF541Q9H0D2 1346 aa21.62■■□□□ 1.05
CTSB-229ENST00000533572 FZD9O00144 591 aa21.62■■□□□ 1.05
CTSB-229ENST00000533572 PLIN1O60240 522 aa21.62■■□□□ 1.05
CTSB-229ENST00000533572 WDR90Q96KV7 1748 aa21.62■■□□□ 1.05
CTSB-229ENST00000533572 MYH3P11055 1940 aa21.61■■□□□ 1.05
CTSB-229ENST00000533572 IQCA1LA6NCM1 817 aa21.61■■□□□ 1.05
CTSB-229ENST00000533572 TTLL11Q8NHH1 800 aa21.61■■□□□ 1.05
CTSB-229ENST00000533572 LRRC37AA6NMS7 1700 aa21.6■■□□□ 1.05
CTSB-229ENST00000533572 C6orf229H3BNL8 230 aa21.6■■□□□ 1.05
CTSB-229ENST00000533572 TMEM57Q8N5G2 664 aa21.6■■□□□ 1.05
CTSB-229ENST00000533572 PLA2G12BQ9BX93 195 aa21.6■■□□□ 1.05
CTSB-229ENST00000533572 C9orf78Q9NZ63 289 aaPredicted RBP21.6■■□□□ 1.05
CTSB-229ENST00000533572 KIAA2012Q0VF49 1180 aa21.59■■□□□ 1.05
CTSB-229ENST00000533572 GPC2Q8N158 579 aa21.59■■□□□ 1.05
CTSB-229ENST00000533572 EYA3Q99504 573 aa21.59■■□□□ 1.05
CTSB-229ENST00000533572 GREM2Q9H772 168 aa21.59■■□□□ 1.05
CTSB-229ENST00000533572 ANKIB1Q9P2G1 1089 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms