RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 LAMB2P55268 1798 aa15.61■□□□□ 0.09
SF3B2-213ENST00000533421 WDR90Q96KV7 1748 aa15.6■□□□□ 0.09
SF3B2-213ENST00000533421 PCCAP05165 728 aaPredicted RBP15.6■□□□□ 0.09
SF3B2-213ENST00000533421 SF3B3Q15393 1217 aaKnown RBP15.6■□□□□ 0.09
SF3B2-213ENST00000533421 C3orf67Q6ZVT6 689 aa15.6■□□□□ 0.09
SF3B2-213ENST00000533421 G2E3Q7L622 706 aa15.6■□□□□ 0.09
SF3B2-213ENST00000533421 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
SF3B2-213ENST00000533421 SMC1BQ8NDV3 1235 aa15.6■□□□□ 0.09
SF3B2-213ENST00000533421 PI4KAP2A4QPH2 592 aa15.59■□□□□ 0.09
SF3B2-213ENST00000533421 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
SF3B2-213ENST00000533421 DPP8Q6V1X1 898 aaPredicted RBP15.59■□□□□ 0.09
SF3B2-213ENST00000533421 TRMT2AQ8IZ69 625 aaKnown RBP15.59■□□□□ 0.09
SF3B2-213ENST00000533421 LARGE2Q8N3Y3 721 aa15.59■□□□□ 0.09
SF3B2-213ENST00000533421 PI4KAP1Q8N8J0 262 aa15.59■□□□□ 0.09
SF3B2-213ENST00000533421 DDX60Q8IY21 1712 aaKnown RBP15.59■□□□□ 0.09
SF3B2-213ENST00000533421 PDE8AO60658 829 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 APLP1P51693 650 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 FLIIQ13045 1269 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 FKBP5Q13451 457 aaPredicted RBP15.58■□□□□ 0.08
SF3B2-213ENST00000533421 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 RTL5Q5HYW3 569 aaPredicted RBP15.58■□□□□ 0.08
SF3B2-213ENST00000533421 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 NIM1KQ8IY84 436 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 MPNDQ8N594 471 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 BCL2L13Q9BXK5 485 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
SF3B2-213ENST00000533421 IFFO2Q5TF58 517 aa15.57■□□□□ 0.08
SF3B2-213ENST00000533421 CDHR2Q9BYE9 1310 aa15.57■□□□□ 0.08
SF3B2-213ENST00000533421 SNED1Q8TER0 1413 aa15.57■□□□□ 0.08
SF3B2-213ENST00000533421 FZD9O00144 591 aa15.56■□□□□ 0.08
SF3B2-213ENST00000533421 PPIP5K2O43314 1243 aa15.56■□□□□ 0.08
SF3B2-213ENST00000533421 DDNO94850 711 aaPredicted RBP15.56■□□□□ 0.08
SF3B2-213ENST00000533421 GPC2Q8N158 579 aa15.56■□□□□ 0.08
SF3B2-213ENST00000533421 L3MBTL3Q96JM7 780 aaPredicted RBP15.56■□□□□ 0.08
SF3B2-213ENST00000533421 RTFDC1Q9BY42 306 aaPredicted RBP15.56■□□□□ 0.08
SF3B2-213ENST00000533421 SCN4AP35499 1836 aa15.55■□□□□ 0.08
SF3B2-213ENST00000533421 DNAAF4Q8WXU2 420 aa15.55■□□□□ 0.08
SF3B2-213ENST00000533421 LMOD1P29536 600 aaPredicted RBP15.54■□□□□ 0.08
SF3B2-213ENST00000533421 RPS8P62241 208 aaKnown RBP15.54■□□□□ 0.08
SF3B2-213ENST00000533421 CDC5LQ99459 802 aaKnown RBP15.54■□□□□ 0.08
SF3B2-213ENST00000533421 HACL1Q9UJ83 578 aa15.54■□□□□ 0.08
SF3B2-213ENST00000533421 NEURL1BA8MQ27 555 aa15.53■□□□□ 0.08
SF3B2-213ENST00000533421 PNMA8AQ86V59 439 aaPredicted RBP15.53■□□□□ 0.08
SF3B2-213ENST00000533421 LINS1Q8NG48 757 aa15.53■□□□□ 0.08
SF3B2-213ENST00000533421 SSH1Q8WYL5 1049 aa15.53■□□□□ 0.08
SF3B2-213ENST00000533421 EYA3Q99504 573 aa15.53■□□□□ 0.08
SF3B2-213ENST00000533421 LRRC37AA6NMS7 1700 aa15.52■□□□□ 0.08
SF3B2-213ENST00000533421 ZNF541Q9H0D2 1346 aa15.52■□□□□ 0.08
SF3B2-213ENST00000533421 IGKV5-2P06315 115 aa15.52■□□□□ 0.08
SF3B2-213ENST00000533421 CTSWP56202 376 aa15.52■□□□□ 0.08
SF3B2-213ENST00000533421 KIAA2012Q0VF49 1180 aa15.52■□□□□ 0.08
SF3B2-213ENST00000533421 AOC3Q16853 763 aa15.52■□□□□ 0.08
SF3B2-213ENST00000533421 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.08
SF3B2-213ENST00000533421 MYH3P11055 1940 aa15.51■□□□□ 0.07
SF3B2-213ENST00000533421 CWF19L2Q2TBE0 894 aaKnown RBP15.51■□□□□ 0.07
SF3B2-213ENST00000533421 MRPL50Q8N5N7 158 aaKnown RBP15.51■□□□□ 0.07
SF3B2-213ENST00000533421 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
SF3B2-213ENST00000533421 ZNRF3Q9ULT6 936 aa15.51■□□□□ 0.07
SF3B2-213ENST00000533421 NSFL1CQ9UNZ2 370 aaKnown RBP15.51■□□□□ 0.07
SF3B2-213ENST00000533421 GJA3Q9Y6H8 435 aa15.51■□□□□ 0.07
SF3B2-213ENST00000533421 POTECB2RU33 542 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 F6X3S4 739 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 GCKRQ14397 625 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 TNIP1Q15025 636 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 WASHC4Q2M389 1173 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 UBE3BQ7Z3V4 1068 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 JARID2Q92833 1246 aaPredicted RBP15.5■□□□□ 0.07
SF3B2-213ENST00000533421 TAF1DQ9H5J8 278 aaPredicted RBP15.5■□□□□ 0.07
SF3B2-213ENST00000533421 SMC4Q9NTJ3 1288 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 ANKIB1Q9P2G1 1089 aa15.5■□□□□ 0.07
SF3B2-213ENST00000533421 G3V3G9 751 aa15.49■□□□□ 0.07
SF3B2-213ENST00000533421 C6orf229H3BNL8 230 aa15.49■□□□□ 0.07
SF3B2-213ENST00000533421 H7C1W4 665 aa15.49■□□□□ 0.07
SF3B2-213ENST00000533421 DCAF8Q5TAQ9 597 aa15.49■□□□□ 0.07
SF3B2-213ENST00000533421 RTL9Q8NET4 1388 aa15.49■□□□□ 0.07
SF3B2-213ENST00000533421 TAF1P21675 1872 aa15.48■□□□□ 0.07
SF3B2-213ENST00000533421 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
SF3B2-213ENST00000533421 EPHX2P34913 555 aa15.48■□□□□ 0.07
SF3B2-213ENST00000533421 EAPPQ56P03 285 aaPredicted RBP15.48■□□□□ 0.07
SF3B2-213ENST00000533421 CIAPIN1Q6FI81 312 aa15.48■□□□□ 0.07
SF3B2-213ENST00000533421 PLA2G12BQ9BX93 195 aa15.48■□□□□ 0.07
SF3B2-213ENST00000533421 PODXL2Q9NZ53 605 aa15.48■□□□□ 0.07
SF3B2-213ENST00000533421 GGA1Q9UJY5 639 aa15.48■□□□□ 0.07
SF3B2-213ENST00000533421 BCAR3O75815 825 aa15.47■□□□□ 0.07
SF3B2-213ENST00000533421 IGHMBP2P38935 993 aaKnown RBP15.47■□□□□ 0.07
SF3B2-213ENST00000533421 RARSP54136 660 aaKnown RBP15.47■□□□□ 0.07
SF3B2-213ENST00000533421 TTLL11Q8NHH1 800 aa15.47■□□□□ 0.07
SF3B2-213ENST00000533421 ZC3H12CQ9C0D7 883 aaKnown RBP15.47■□□□□ 0.07
SF3B2-213ENST00000533421 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
SF3B2-213ENST00000533421 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
SF3B2-213ENST00000533421 PTPRCP08575 1304 aa15.46■□□□□ 0.07
SF3B2-213ENST00000533421 XDHP47989 1333 aa15.46■□□□□ 0.07
SF3B2-213ENST00000533421 ALDH1L1O75891 902 aa15.46■□□□□ 0.07
SF3B2-213ENST00000533421 GPSM2P81274 684 aa15.46■□□□□ 0.07
SF3B2-213ENST00000533421 CCDC85AQ96PX6 553 aaPredicted RBP15.46■□□□□ 0.07
SF3B2-213ENST00000533421 BSDC1Q9NW68 430 aaPredicted RBP15.46■□□□□ 0.07
SF3B2-213ENST00000533421 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
SF3B2-213ENST00000533421 UFL1O94874 794 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms